Protein–RNA interactions for Protein: Q8WZ73

RFFL, E3 ubiquitin-protein ligase rififylin, humanhuman

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFFLQ8WZ73 PVT1_1.1-201ENST00000615125 194 ntBASIC23.98■■□□□ 1.43
RFFLQ8WZ73 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
RFFLQ8WZ73 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
RFFLQ8WZ73 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
RFFLQ8WZ73 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC23.98■■□□□ 1.43
RFFLQ8WZ73 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC23.98■■□□□ 1.43
RFFLQ8WZ73 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
RFFLQ8WZ73 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC23.98■■□□□ 1.43
RFFLQ8WZ73 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC23.98■■□□□ 1.43
RFFLQ8WZ73 AC233723.2-201ENST00000623798 2106 ntBASIC23.98■■□□□ 1.43
RFFLQ8WZ73 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC23.98■■□□□ 1.43
RFFLQ8WZ73 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC23.98■■□□□ 1.43
RFFLQ8WZ73 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
RFFLQ8WZ73 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
RFFLQ8WZ73 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC23.97■■□□□ 1.43
RFFLQ8WZ73 KRT18P24-201ENST00000344739 1156 ntBASIC23.97■■□□□ 1.43
RFFLQ8WZ73 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC23.97■■□□□ 1.43
RFFLQ8WZ73 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
RFFLQ8WZ73 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC23.97■■□□□ 1.43
RFFLQ8WZ73 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC23.97■■□□□ 1.43
RFFLQ8WZ73 C1orf229-201ENST00000623686 2258 ntBASIC23.96■■□□□ 1.43
RFFLQ8WZ73 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
RFFLQ8WZ73 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
RFFLQ8WZ73 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC23.96■■□□□ 1.43
RFFLQ8WZ73 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
RFFLQ8WZ73 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC23.96■■□□□ 1.43
RFFLQ8WZ73 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
RFFLQ8WZ73 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC23.96■■□□□ 1.43
RFFLQ8WZ73 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
RFFLQ8WZ73 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC23.95■■□□□ 1.42
RFFLQ8WZ73 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC23.95■■□□□ 1.42
RFFLQ8WZ73 THA1P-201ENST00000590384 1145 ntBASIC23.95■■□□□ 1.42
RFFLQ8WZ73 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC23.95■■□□□ 1.42
RFFLQ8WZ73 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC23.95■■□□□ 1.42
RFFLQ8WZ73 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC23.94■■□□□ 1.42
RFFLQ8WZ73 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
RFFLQ8WZ73 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
RFFLQ8WZ73 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC23.94■■□□□ 1.42
RFFLQ8WZ73 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC23.94■■□□□ 1.42
RFFLQ8WZ73 BEX3-202ENST00000372634 753 ntTSL 2 BASIC23.94■■□□□ 1.42
RFFLQ8WZ73 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC23.94■■□□□ 1.42
RFFLQ8WZ73 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
RFFLQ8WZ73 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
RFFLQ8WZ73 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC23.94■■□□□ 1.42
RFFLQ8WZ73 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
RFFLQ8WZ73 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
RFFLQ8WZ73 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
RFFLQ8WZ73 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC23.94■■□□□ 1.42
RFFLQ8WZ73 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC23.94■■□□□ 1.42
RFFLQ8WZ73 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
RFFLQ8WZ73 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
RFFLQ8WZ73 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC23.93■■□□□ 1.42
RFFLQ8WZ73 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
RFFLQ8WZ73 AC009299.2-201ENST00000482477 511 ntBASIC23.93■■□□□ 1.42
RFFLQ8WZ73 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC23.93■■□□□ 1.42
RFFLQ8WZ73 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
RFFLQ8WZ73 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC23.93■■□□□ 1.42
RFFLQ8WZ73 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
RFFLQ8WZ73 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
RFFLQ8WZ73 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
RFFLQ8WZ73 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
RFFLQ8WZ73 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC23.92■■□□□ 1.42
RFFLQ8WZ73 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC23.92■■□□□ 1.42
RFFLQ8WZ73 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
RFFLQ8WZ73 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
RFFLQ8WZ73 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC23.92■■□□□ 1.42
RFFLQ8WZ73 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC23.92■■□□□ 1.42
RFFLQ8WZ73 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
RFFLQ8WZ73 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC23.91■■□□□ 1.42
RFFLQ8WZ73 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC23.91■■□□□ 1.42
RFFLQ8WZ73 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
RFFLQ8WZ73 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC23.91■■□□□ 1.42
RFFLQ8WZ73 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
RFFLQ8WZ73 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC23.91■■□□□ 1.42
RFFLQ8WZ73 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
RFFLQ8WZ73 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
RFFLQ8WZ73 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
RFFLQ8WZ73 AC103834.1-201ENST00000520383 144 ntBASIC23.91■■□□□ 1.42
RFFLQ8WZ73 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC23.91■■□□□ 1.42
RFFLQ8WZ73 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC23.91■■□□□ 1.42
RFFLQ8WZ73 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC23.91■■□□□ 1.42
RFFLQ8WZ73 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
RFFLQ8WZ73 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC23.91■■□□□ 1.42
RFFLQ8WZ73 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC23.91■■□□□ 1.42
RFFLQ8WZ73 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
RFFLQ8WZ73 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC23.91■■□□□ 1.42
RFFLQ8WZ73 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
RFFLQ8WZ73 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC23.9■■□□□ 1.42
RFFLQ8WZ73 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
RFFLQ8WZ73 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC23.9■■□□□ 1.42
RFFLQ8WZ73 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
RFFLQ8WZ73 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
RFFLQ8WZ73 AC004448.1-201ENST00000458332 883 ntBASIC23.9■■□□□ 1.42
RFFLQ8WZ73 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC23.9■■□□□ 1.42
RFFLQ8WZ73 KRT8P33-201ENST00000508125 1423 ntBASIC23.9■■□□□ 1.42
RFFLQ8WZ73 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC23.9■■□□□ 1.42
RFFLQ8WZ73 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC23.9■■□□□ 1.42
RFFLQ8WZ73 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
RFFLQ8WZ73 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC23.89■■□□□ 1.42
RFFLQ8WZ73 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC23.89■■□□□ 1.42
Retrieved 100 of 98,524 protein–RNA pairs in 987.8 ms