Protein–RNA interactions for Protein: Q8NHS1

CLDND2, Claudin domain-containing protein 2, humanhuman

Predictions only

Length 167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND2Q8NHS1 AL022069.1-201ENST00000568025 1636 ntBASIC19.12■□□□□ 0.65
CLDND2Q8NHS1 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC19.12■□□□□ 0.65
CLDND2Q8NHS1 UNC93B3-201ENST00000308076 687 ntBASIC19.12■□□□□ 0.65
CLDND2Q8NHS1 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
CLDND2Q8NHS1 PBX2P1-201ENST00000493219 1291 ntBASIC19.12■□□□□ 0.65
CLDND2Q8NHS1 AC133561.4-201ENST00000566112 224 ntBASIC19.12■□□□□ 0.65
CLDND2Q8NHS1 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CLDND2Q8NHS1 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
CLDND2Q8NHS1 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CLDND2Q8NHS1 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
CLDND2Q8NHS1 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC19.12■□□□□ 0.65
CLDND2Q8NHS1 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
CLDND2Q8NHS1 GATM-206ENST00000558336 1522 ntTSL 2 BASIC19.11■□□□□ 0.65
CLDND2Q8NHS1 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CLDND2Q8NHS1 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC19.11■□□□□ 0.65
CLDND2Q8NHS1 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
CLDND2Q8NHS1 AC106739.1-201ENST00000617035 715 ntBASIC19.11■□□□□ 0.65
CLDND2Q8NHS1 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CLDND2Q8NHS1 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CLDND2Q8NHS1 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC19.11■□□□□ 0.65
CLDND2Q8NHS1 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
CLDND2Q8NHS1 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
CLDND2Q8NHS1 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC19.1■□□□□ 0.65
CLDND2Q8NHS1 FNTA-201ENST00000302279 1840 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CLDND2Q8NHS1 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CLDND2Q8NHS1 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CLDND2Q8NHS1 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC19.1■□□□□ 0.65
CLDND2Q8NHS1 SNCB-201ENST00000310112 1383 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CLDND2Q8NHS1 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
CLDND2Q8NHS1 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
CLDND2Q8NHS1 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
CLDND2Q8NHS1 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC19.09■□□□□ 0.65
CLDND2Q8NHS1 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
CLDND2Q8NHS1 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC19.09■□□□□ 0.65
CLDND2Q8NHS1 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
CLDND2Q8NHS1 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC19.09■□□□□ 0.65
CLDND2Q8NHS1 AL136162.1-201ENST00000607711 1078 ntBASIC19.09■□□□□ 0.65
CLDND2Q8NHS1 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
CLDND2Q8NHS1 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
CLDND2Q8NHS1 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC19.09■□□□□ 0.65
CLDND2Q8NHS1 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CLDND2Q8NHS1 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CLDND2Q8NHS1 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
CLDND2Q8NHS1 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
CLDND2Q8NHS1 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
CLDND2Q8NHS1 SLC35B2-202ENST00000393812 2043 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
CLDND2Q8NHS1 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
CLDND2Q8NHS1 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.65
CLDND2Q8NHS1 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
CLDND2Q8NHS1 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC19.08■□□□□ 0.64
CLDND2Q8NHS1 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
CLDND2Q8NHS1 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC19.08■□□□□ 0.64
CLDND2Q8NHS1 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
CLDND2Q8NHS1 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.64
CLDND2Q8NHS1 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
CLDND2Q8NHS1 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
CLDND2Q8NHS1 FBXW5-201ENST00000325285 2274 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
CLDND2Q8NHS1 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
CLDND2Q8NHS1 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
CLDND2Q8NHS1 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
CLDND2Q8NHS1 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CLDND2Q8NHS1 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC19.07■□□□□ 0.64
CLDND2Q8NHS1 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CLDND2Q8NHS1 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC19.07■□□□□ 0.64
CLDND2Q8NHS1 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CLDND2Q8NHS1 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC19.07■□□□□ 0.64
CLDND2Q8NHS1 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC19.07■□□□□ 0.64
CLDND2Q8NHS1 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
CLDND2Q8NHS1 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CLDND2Q8NHS1 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
CLDND2Q8NHS1 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CLDND2Q8NHS1 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC19.06■□□□□ 0.64
CLDND2Q8NHS1 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CLDND2Q8NHS1 AC135279.3-201ENST00000610945 1311 ntBASIC19.06■□□□□ 0.64
CLDND2Q8NHS1 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
CLDND2Q8NHS1 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CLDND2Q8NHS1 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
CLDND2Q8NHS1 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
CLDND2Q8NHS1 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC19.06■□□□□ 0.64
CLDND2Q8NHS1 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
CLDND2Q8NHS1 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CLDND2Q8NHS1 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CLDND2Q8NHS1 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC19.05■□□□□ 0.64
CLDND2Q8NHS1 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
CLDND2Q8NHS1 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC19.05■□□□□ 0.64
CLDND2Q8NHS1 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
CLDND2Q8NHS1 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
CLDND2Q8NHS1 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC19.05■□□□□ 0.64
CLDND2Q8NHS1 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC19.05■□□□□ 0.64
CLDND2Q8NHS1 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC19.05■□□□□ 0.64
CLDND2Q8NHS1 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC19.05■□□□□ 0.64
CLDND2Q8NHS1 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CLDND2Q8NHS1 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CLDND2Q8NHS1 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
CLDND2Q8NHS1 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
CLDND2Q8NHS1 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC19.04■□□□□ 0.64
CLDND2Q8NHS1 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC19.04■□□□□ 0.64
CLDND2Q8NHS1 AC024257.2-201ENST00000549699 147 ntBASIC19.04■□□□□ 0.64
CLDND2Q8NHS1 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
CLDND2Q8NHS1 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 102.2 ms