Protein–RNA interactions for Protein: Q8NHG7

SVIP, Small VCP/p97-interacting protein, humanhuman

Predictions only

Length 77 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SVIPQ8NHG7 AL353803.4-201ENST00000565882 1934 ntBASIC14.38□□□□□ -0.11
SVIPQ8NHG7 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
SVIPQ8NHG7 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
SVIPQ8NHG7 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
SVIPQ8NHG7 UBTF-204ENST00000436088 2738 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
SVIPQ8NHG7 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
SVIPQ8NHG7 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
SVIPQ8NHG7 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
SVIPQ8NHG7 LILRP2-201ENST00000413439 2127 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
SVIPQ8NHG7 PPCDC-201ENST00000342932 2250 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
SVIPQ8NHG7 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
SVIPQ8NHG7 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
SVIPQ8NHG7 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
SVIPQ8NHG7 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC14.37□□□□□ -0.11
SVIPQ8NHG7 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC14.37□□□□□ -0.11
SVIPQ8NHG7 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC14.37□□□□□ -0.11
SVIPQ8NHG7 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
SVIPQ8NHG7 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
SVIPQ8NHG7 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
SVIPQ8NHG7 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
SVIPQ8NHG7 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
SVIPQ8NHG7 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
SVIPQ8NHG7 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
SVIPQ8NHG7 AL662844.4-201ENST00000606367 2838 ntBASIC14.36□□□□□ -0.11
SVIPQ8NHG7 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
SVIPQ8NHG7 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
SVIPQ8NHG7 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
SVIPQ8NHG7 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
SVIPQ8NHG7 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
SVIPQ8NHG7 RGMA-202ENST00000425933 3078 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
SVIPQ8NHG7 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
SVIPQ8NHG7 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
SVIPQ8NHG7 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
SVIPQ8NHG7 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
SVIPQ8NHG7 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC14.36□□□□□ -0.11
SVIPQ8NHG7 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
SVIPQ8NHG7 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
SVIPQ8NHG7 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
SVIPQ8NHG7 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
SVIPQ8NHG7 AL596257.1-201ENST00000641463 2694 ntBASIC14.35□□□□□ -0.11
SVIPQ8NHG7 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC14.35□□□□□ -0.11
SVIPQ8NHG7 ZDHHC8-203ENST00000405930 3112 ntTSL 2 BASIC14.35□□□□□ -0.11
SVIPQ8NHG7 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
SVIPQ8NHG7 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
SVIPQ8NHG7 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
SVIPQ8NHG7 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC14.35□□□□□ -0.11
SVIPQ8NHG7 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC14.35□□□□□ -0.11
SVIPQ8NHG7 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
SVIPQ8NHG7 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
SVIPQ8NHG7 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
SVIPQ8NHG7 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
SVIPQ8NHG7 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
SVIPQ8NHG7 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
SVIPQ8NHG7 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
SVIPQ8NHG7 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
SVIPQ8NHG7 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SVIPQ8NHG7 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SVIPQ8NHG7 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SVIPQ8NHG7 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
SVIPQ8NHG7 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
SVIPQ8NHG7 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC14.34□□□□□ -0.11
SVIPQ8NHG7 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SVIPQ8NHG7 TEAD3-201ENST00000338863 2983 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
SVIPQ8NHG7 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC14.34□□□□□ -0.11
SVIPQ8NHG7 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC14.34□□□□□ -0.11
SVIPQ8NHG7 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
SVIPQ8NHG7 LINC01521-201ENST00000504184 1943 ntBASIC14.34□□□□□ -0.11
SVIPQ8NHG7 ADORA1-204ENST00000367236 3407 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SVIPQ8NHG7 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC14.34□□□□□ -0.11
SVIPQ8NHG7 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
SVIPQ8NHG7 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
SVIPQ8NHG7 AC087289.5-201ENST00000586076 3175 ntBASIC14.34□□□□□ -0.11
SVIPQ8NHG7 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC14.33□□□□□ -0.11
SVIPQ8NHG7 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC14.33□□□□□ -0.11
SVIPQ8NHG7 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
SVIPQ8NHG7 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
SVIPQ8NHG7 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC14.33□□□□□ -0.12
SVIPQ8NHG7 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
SVIPQ8NHG7 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
SVIPQ8NHG7 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC14.33□□□□□ -0.12
SVIPQ8NHG7 ITGB2-206ENST00000397852 2769 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
SVIPQ8NHG7 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
SVIPQ8NHG7 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
SVIPQ8NHG7 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC14.33□□□□□ -0.12
SVIPQ8NHG7 HDGF-210ENST00000537739 2073 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
SVIPQ8NHG7 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC14.33□□□□□ -0.12
SVIPQ8NHG7 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
SVIPQ8NHG7 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
SVIPQ8NHG7 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
SVIPQ8NHG7 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
SVIPQ8NHG7 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
SVIPQ8NHG7 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC14.33□□□□□ -0.12
SVIPQ8NHG7 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
SVIPQ8NHG7 TBCE-202ENST00000406207 2012 ntAPPRIS P3 TSL 5 BASIC14.32□□□□□ -0.12
SVIPQ8NHG7 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC14.32□□□□□ -0.12
SVIPQ8NHG7 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
SVIPQ8NHG7 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
SVIPQ8NHG7 CPT2-201ENST00000371486 3094 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
SVIPQ8NHG7 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC14.32□□□□□ -0.12
SVIPQ8NHG7 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 19 ms