Protein–RNA interactions for Protein: Q8N6Y1

PCDH20, Protocadherin-20, humanhuman

Known RBP Predictions only

Length 951 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH20Q8N6Y1 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC23.04■■□□□ 1.28
PCDH20Q8N6Y1 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC23.04■■□□□ 1.28
PCDH20Q8N6Y1 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC23.03■■□□□ 1.28
PCDH20Q8N6Y1 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC23.03■■□□□ 1.28
PCDH20Q8N6Y1 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC23.03■■□□□ 1.28
PCDH20Q8N6Y1 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
PCDH20Q8N6Y1 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC23.03■■□□□ 1.28
PCDH20Q8N6Y1 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC23.03■■□□□ 1.28
PCDH20Q8N6Y1 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
PCDH20Q8N6Y1 SRD5A1P1-201ENST00000442297 786 ntBASIC23.03■■□□□ 1.28
PCDH20Q8N6Y1 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC23.03■■□□□ 1.28
PCDH20Q8N6Y1 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
PCDH20Q8N6Y1 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC23.03■■□□□ 1.28
PCDH20Q8N6Y1 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC23.03■■□□□ 1.28
PCDH20Q8N6Y1 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
PCDH20Q8N6Y1 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC23.02■■□□□ 1.28
PCDH20Q8N6Y1 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
PCDH20Q8N6Y1 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC23.02■■□□□ 1.28
PCDH20Q8N6Y1 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC23.02■■□□□ 1.28
PCDH20Q8N6Y1 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
PCDH20Q8N6Y1 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
PCDH20Q8N6Y1 USF2-207ENST00000595068 1612 ntTSL 5 BASIC23.02■■□□□ 1.28
PCDH20Q8N6Y1 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC23.02■■□□□ 1.28
PCDH20Q8N6Y1 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC23.02■■□□□ 1.28
PCDH20Q8N6Y1 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC23.02■■□□□ 1.28
PCDH20Q8N6Y1 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
PCDH20Q8N6Y1 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC23.02■■□□□ 1.28
PCDH20Q8N6Y1 GATM-206ENST00000558336 1522 ntTSL 2 BASIC23.02■■□□□ 1.28
PCDH20Q8N6Y1 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
PCDH20Q8N6Y1 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
PCDH20Q8N6Y1 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
PCDH20Q8N6Y1 AC009102.2-201ENST00000606772 1639 ntBASIC23.01■■□□□ 1.27
PCDH20Q8N6Y1 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
PCDH20Q8N6Y1 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
PCDH20Q8N6Y1 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC23.01■■□□□ 1.27
PCDH20Q8N6Y1 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
PCDH20Q8N6Y1 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC23.01■■□□□ 1.27
PCDH20Q8N6Y1 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
PCDH20Q8N6Y1 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC23.01■■□□□ 1.27
PCDH20Q8N6Y1 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
PCDH20Q8N6Y1 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
PCDH20Q8N6Y1 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC23.01■■□□□ 1.27
PCDH20Q8N6Y1 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC23■■□□□ 1.27
PCDH20Q8N6Y1 MTURN-203ENST00000409688 843 ntTSL 2 BASIC23■■□□□ 1.27
PCDH20Q8N6Y1 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC23■■□□□ 1.27
PCDH20Q8N6Y1 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
PCDH20Q8N6Y1 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC23■■□□□ 1.27
PCDH20Q8N6Y1 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
PCDH20Q8N6Y1 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
PCDH20Q8N6Y1 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC22.99■■□□□ 1.27
PCDH20Q8N6Y1 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
PCDH20Q8N6Y1 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC22.99■■□□□ 1.27
PCDH20Q8N6Y1 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC22.99■■□□□ 1.27
PCDH20Q8N6Y1 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
PCDH20Q8N6Y1 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC22.99■■□□□ 1.27
PCDH20Q8N6Y1 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC22.99■■□□□ 1.27
PCDH20Q8N6Y1 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
PCDH20Q8N6Y1 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC22.98■■□□□ 1.27
PCDH20Q8N6Y1 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
PCDH20Q8N6Y1 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC22.98■■□□□ 1.27
PCDH20Q8N6Y1 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC22.98■■□□□ 1.27
PCDH20Q8N6Y1 EI24-213ENST00000618552 1747 ntTSL 5 BASIC22.98■■□□□ 1.27
PCDH20Q8N6Y1 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
PCDH20Q8N6Y1 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC22.98■■□□□ 1.27
PCDH20Q8N6Y1 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
PCDH20Q8N6Y1 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
PCDH20Q8N6Y1 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
PCDH20Q8N6Y1 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
PCDH20Q8N6Y1 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC22.97■■□□□ 1.27
PCDH20Q8N6Y1 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC22.97■■□□□ 1.27
PCDH20Q8N6Y1 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC22.97■■□□□ 1.27
PCDH20Q8N6Y1 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
PCDH20Q8N6Y1 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC22.97■■□□□ 1.27
PCDH20Q8N6Y1 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC22.97■■□□□ 1.27
PCDH20Q8N6Y1 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC22.97■■□□□ 1.27
PCDH20Q8N6Y1 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
PCDH20Q8N6Y1 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC22.96■■□□□ 1.27
PCDH20Q8N6Y1 AC133561.1-201ENST00000568600 2415 ntBASIC22.96■■□□□ 1.27
PCDH20Q8N6Y1 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC22.96■■□□□ 1.27
PCDH20Q8N6Y1 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC22.96■■□□□ 1.27
PCDH20Q8N6Y1 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC22.96■■□□□ 1.27
PCDH20Q8N6Y1 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC22.96■■□□□ 1.27
PCDH20Q8N6Y1 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC22.96■■□□□ 1.27
PCDH20Q8N6Y1 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC22.96■■□□□ 1.27
PCDH20Q8N6Y1 SHD-204ENST00000599689 1729 ntTSL 5 BASIC22.96■■□□□ 1.27
PCDH20Q8N6Y1 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
PCDH20Q8N6Y1 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC22.95■■□□□ 1.26
PCDH20Q8N6Y1 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
PCDH20Q8N6Y1 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC22.95■■□□□ 1.26
PCDH20Q8N6Y1 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC22.95■■□□□ 1.26
PCDH20Q8N6Y1 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC22.95■■□□□ 1.26
PCDH20Q8N6Y1 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC22.95■■□□□ 1.26
PCDH20Q8N6Y1 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC22.95■■□□□ 1.26
PCDH20Q8N6Y1 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC22.94■■□□□ 1.26
PCDH20Q8N6Y1 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC22.94■■□□□ 1.26
PCDH20Q8N6Y1 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC22.94■■□□□ 1.26
PCDH20Q8N6Y1 C17orf82-201ENST00000623772 1530 ntBASIC22.94■■□□□ 1.26
PCDH20Q8N6Y1 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC22.94■■□□□ 1.26
PCDH20Q8N6Y1 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
PCDH20Q8N6Y1 NALT1-201ENST00000429224 738 ntTSL 5 BASIC22.94■■□□□ 1.26
Retrieved 100 of 98,524 protein–RNA pairs in 27.4 ms