Protein–RNA interactions for Protein: Q8N5M1

ATPAF2, ATP synthase mitochondrial F1 complex assembly factor 2, humanhuman

Predictions only

Length 289 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF2Q8N5M1 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
ATPAF2Q8N5M1 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC23.16■■□□□ 1.3
ATPAF2Q8N5M1 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
ATPAF2Q8N5M1 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
ATPAF2Q8N5M1 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC23.15■■□□□ 1.3
ATPAF2Q8N5M1 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC23.15■■□□□ 1.3
ATPAF2Q8N5M1 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
ATPAF2Q8N5M1 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC23.15■■□□□ 1.3
ATPAF2Q8N5M1 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC23.15■■□□□ 1.3
ATPAF2Q8N5M1 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
ATPAF2Q8N5M1 MIR6724-1-201ENST00000616420 92 ntBASIC23.15■■□□□ 1.3
ATPAF2Q8N5M1 MIR6724-2-201ENST00000616483 92 ntBASIC23.15■■□□□ 1.3
ATPAF2Q8N5M1 MIR6724-4-201ENST00000617390 92 ntBASIC23.15■■□□□ 1.3
ATPAF2Q8N5M1 MIR6724-3-201ENST00000622482 92 ntBASIC23.15■■□□□ 1.3
ATPAF2Q8N5M1 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC23.15■■□□□ 1.3
ATPAF2Q8N5M1 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
ATPAF2Q8N5M1 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
ATPAF2Q8N5M1 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC23.14■■□□□ 1.3
ATPAF2Q8N5M1 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC23.14■■□□□ 1.29
ATPAF2Q8N5M1 GRAMD4P7-201ENST00000578182 1232 ntBASIC23.14■■□□□ 1.29
ATPAF2Q8N5M1 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC23.14■■□□□ 1.29
ATPAF2Q8N5M1 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
ATPAF2Q8N5M1 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC23.14■■□□□ 1.29
ATPAF2Q8N5M1 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC23.14■■□□□ 1.29
ATPAF2Q8N5M1 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC23.14■■□□□ 1.29
ATPAF2Q8N5M1 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC23.13■■□□□ 1.29
ATPAF2Q8N5M1 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
ATPAF2Q8N5M1 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
ATPAF2Q8N5M1 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
ATPAF2Q8N5M1 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC23.13■■□□□ 1.29
ATPAF2Q8N5M1 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
ATPAF2Q8N5M1 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC23.13■■□□□ 1.29
ATPAF2Q8N5M1 ANOS2P-203ENST00000472227 1816 ntBASIC23.12■■□□□ 1.29
ATPAF2Q8N5M1 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC23.12■■□□□ 1.29
ATPAF2Q8N5M1 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
ATPAF2Q8N5M1 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC23.12■■□□□ 1.29
ATPAF2Q8N5M1 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC23.12■■□□□ 1.29
ATPAF2Q8N5M1 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC23.12■■□□□ 1.29
ATPAF2Q8N5M1 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
ATPAF2Q8N5M1 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC23.12■■□□□ 1.29
ATPAF2Q8N5M1 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
ATPAF2Q8N5M1 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC23.11■■□□□ 1.29
ATPAF2Q8N5M1 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
ATPAF2Q8N5M1 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
ATPAF2Q8N5M1 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC23.11■■□□□ 1.29
ATPAF2Q8N5M1 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC23.11■■□□□ 1.29
ATPAF2Q8N5M1 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC23.11■■□□□ 1.29
ATPAF2Q8N5M1 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC23.11■■□□□ 1.29
ATPAF2Q8N5M1 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC23.11■■□□□ 1.29
ATPAF2Q8N5M1 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC23.1■■□□□ 1.29
ATPAF2Q8N5M1 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC23.1■■□□□ 1.29
ATPAF2Q8N5M1 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
ATPAF2Q8N5M1 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC23.1■■□□□ 1.29
ATPAF2Q8N5M1 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC23.1■■□□□ 1.29
ATPAF2Q8N5M1 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
ATPAF2Q8N5M1 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
ATPAF2Q8N5M1 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
ATPAF2Q8N5M1 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC23.09■■□□□ 1.29
ATPAF2Q8N5M1 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC23.09■■□□□ 1.29
ATPAF2Q8N5M1 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC23.09■■□□□ 1.29
ATPAF2Q8N5M1 AL356441.2-201ENST00000443009 864 ntBASIC23.09■■□□□ 1.29
ATPAF2Q8N5M1 H19-210ENST00000439725 1929 ntTSL 2 BASIC23.09■■□□□ 1.29
ATPAF2Q8N5M1 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
ATPAF2Q8N5M1 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
ATPAF2Q8N5M1 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
ATPAF2Q8N5M1 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
ATPAF2Q8N5M1 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC23.09■■□□□ 1.29
ATPAF2Q8N5M1 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
ATPAF2Q8N5M1 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC23.08■■□□□ 1.29
ATPAF2Q8N5M1 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
ATPAF2Q8N5M1 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC23.08■■□□□ 1.29
ATPAF2Q8N5M1 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC23.08■■□□□ 1.29
ATPAF2Q8N5M1 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
ATPAF2Q8N5M1 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.28
ATPAF2Q8N5M1 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC23.08■■□□□ 1.28
ATPAF2Q8N5M1 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC23.08■■□□□ 1.28
ATPAF2Q8N5M1 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC23.07■■□□□ 1.28
ATPAF2Q8N5M1 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
ATPAF2Q8N5M1 AK3-203ENST00000447596 705 ntTSL 2 BASIC23.07■■□□□ 1.28
ATPAF2Q8N5M1 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC23.07■■□□□ 1.28
ATPAF2Q8N5M1 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
ATPAF2Q8N5M1 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC23.06■■□□□ 1.28
ATPAF2Q8N5M1 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC23.06■■□□□ 1.28
ATPAF2Q8N5M1 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
ATPAF2Q8N5M1 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC23.06■■□□□ 1.28
ATPAF2Q8N5M1 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
ATPAF2Q8N5M1 AC092068.2-201ENST00000590491 1708 ntBASIC23.06■■□□□ 1.28
ATPAF2Q8N5M1 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC23.06■■□□□ 1.28
ATPAF2Q8N5M1 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC23.06■■□□□ 1.28
ATPAF2Q8N5M1 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC23.06■■□□□ 1.28
ATPAF2Q8N5M1 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC23.06■■□□□ 1.28
ATPAF2Q8N5M1 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC23.06■■□□□ 1.28
ATPAF2Q8N5M1 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
ATPAF2Q8N5M1 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC23.05■■□□□ 1.28
ATPAF2Q8N5M1 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC23.05■■□□□ 1.28
ATPAF2Q8N5M1 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC23.05■■□□□ 1.28
ATPAF2Q8N5M1 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
ATPAF2Q8N5M1 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
ATPAF2Q8N5M1 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC23.05■■□□□ 1.28
ATPAF2Q8N5M1 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC23.05■■□□□ 1.28
Retrieved 100 of 98,524 protein–RNA pairs in 76.7 ms