Protein–RNA interactions for Protein: Q8IYX3

CCDC116, Coiled-coil domain-containing protein 116, humanhuman

Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC116Q8IYX3 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC21.27■■□□□ 1
CCDC116Q8IYX3 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC21.27■■□□□ 1
CCDC116Q8IYX3 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC21.27■■□□□ 1
CCDC116Q8IYX3 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC21.27■■□□□ 1
CCDC116Q8IYX3 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC21.27■■□□□ 1
CCDC116Q8IYX3 H19-210ENST00000439725 1929 ntTSL 2 BASIC21.27■■□□□ 1
CCDC116Q8IYX3 NFE2L3P1-201ENST00000588207 1959 ntBASIC21.27■□□□□ 0.99
CCDC116Q8IYX3 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC21.26■□□□□ 0.99
CCDC116Q8IYX3 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
CCDC116Q8IYX3 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
CCDC116Q8IYX3 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
CCDC116Q8IYX3 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC21.26■□□□□ 0.99
CCDC116Q8IYX3 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
CCDC116Q8IYX3 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC21.26■□□□□ 0.99
CCDC116Q8IYX3 TSPY9P-201ENST00000440215 945 ntBASIC21.26■□□□□ 0.99
CCDC116Q8IYX3 TSPY11P-201ENST00000442607 1045 ntBASIC21.26■□□□□ 0.99
CCDC116Q8IYX3 AL035685.1-201ENST00000636663 812 ntBASIC21.26■□□□□ 0.99
CCDC116Q8IYX3 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC21.26■□□□□ 0.99
CCDC116Q8IYX3 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
CCDC116Q8IYX3 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
CCDC116Q8IYX3 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
CCDC116Q8IYX3 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC21.26■□□□□ 0.99
CCDC116Q8IYX3 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
CCDC116Q8IYX3 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
CCDC116Q8IYX3 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
CCDC116Q8IYX3 CLTA-206ENST00000466396 695 ntTSL 2 BASIC21.25■□□□□ 0.99
CCDC116Q8IYX3 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
CCDC116Q8IYX3 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
CCDC116Q8IYX3 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC21.25■□□□□ 0.99
CCDC116Q8IYX3 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC21.25■□□□□ 0.99
CCDC116Q8IYX3 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
CCDC116Q8IYX3 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
CCDC116Q8IYX3 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC21.24■□□□□ 0.99
CCDC116Q8IYX3 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC21.24■□□□□ 0.99
CCDC116Q8IYX3 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC21.24■□□□□ 0.99
CCDC116Q8IYX3 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
CCDC116Q8IYX3 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC21.24■□□□□ 0.99
CCDC116Q8IYX3 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC21.24■□□□□ 0.99
CCDC116Q8IYX3 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC21.24■□□□□ 0.99
CCDC116Q8IYX3 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC21.24■□□□□ 0.99
CCDC116Q8IYX3 MTDHP2-201ENST00000601468 714 ntBASIC21.24■□□□□ 0.99
CCDC116Q8IYX3 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC21.24■□□□□ 0.99
CCDC116Q8IYX3 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
CCDC116Q8IYX3 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
CCDC116Q8IYX3 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
CCDC116Q8IYX3 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
CCDC116Q8IYX3 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
CCDC116Q8IYX3 OR2A1-AS1-204ENST00000470435 602 ntBASIC21.23■□□□□ 0.99
CCDC116Q8IYX3 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC21.23■□□□□ 0.99
CCDC116Q8IYX3 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC21.23■□□□□ 0.99
CCDC116Q8IYX3 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC21.23■□□□□ 0.99
CCDC116Q8IYX3 AC005703.6-201ENST00000623265 1329 ntBASIC21.23■□□□□ 0.99
CCDC116Q8IYX3 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC21.23■□□□□ 0.99
CCDC116Q8IYX3 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
CCDC116Q8IYX3 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
CCDC116Q8IYX3 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CCDC116Q8IYX3 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
CCDC116Q8IYX3 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
CCDC116Q8IYX3 AC092068.2-201ENST00000590491 1708 ntBASIC21.22■□□□□ 0.99
CCDC116Q8IYX3 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CCDC116Q8IYX3 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CCDC116Q8IYX3 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC21.22■□□□□ 0.99
CCDC116Q8IYX3 AC010997.5-201ENST00000609182 354 ntBASIC21.22■□□□□ 0.99
CCDC116Q8IYX3 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
CCDC116Q8IYX3 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC21.22■□□□□ 0.99
CCDC116Q8IYX3 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC21.22■□□□□ 0.99
CCDC116Q8IYX3 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CCDC116Q8IYX3 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CCDC116Q8IYX3 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
CCDC116Q8IYX3 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC21.21■□□□□ 0.99
CCDC116Q8IYX3 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CCDC116Q8IYX3 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
CCDC116Q8IYX3 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC21.21■□□□□ 0.99
CCDC116Q8IYX3 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC21.21■□□□□ 0.99
CCDC116Q8IYX3 CREM-229ENST00000474362 1030 ntTSL 2 BASIC21.21■□□□□ 0.99
CCDC116Q8IYX3 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CCDC116Q8IYX3 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CCDC116Q8IYX3 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC21.21■□□□□ 0.99
CCDC116Q8IYX3 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC21.2■□□□□ 0.98
CCDC116Q8IYX3 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CCDC116Q8IYX3 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
CCDC116Q8IYX3 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CCDC116Q8IYX3 HES6-204ENST00000409182 863 ntTSL 2 BASIC21.2■□□□□ 0.98
CCDC116Q8IYX3 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CCDC116Q8IYX3 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.98
CCDC116Q8IYX3 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC21.2■□□□□ 0.98
CCDC116Q8IYX3 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CCDC116Q8IYX3 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CCDC116Q8IYX3 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CCDC116Q8IYX3 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
CCDC116Q8IYX3 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC21.19■□□□□ 0.98
CCDC116Q8IYX3 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC21.19■□□□□ 0.98
CCDC116Q8IYX3 C9orf163-202ENST00000624034 2573 ntBASIC21.19■□□□□ 0.98
CCDC116Q8IYX3 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
CCDC116Q8IYX3 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC21.19■□□□□ 0.98
CCDC116Q8IYX3 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
CCDC116Q8IYX3 UNC93B8-201ENST00000511903 705 ntBASIC21.19■□□□□ 0.98
CCDC116Q8IYX3 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC21.19■□□□□ 0.98
CCDC116Q8IYX3 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CCDC116Q8IYX3 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 21.2 ms