Protein–RNA interactions for Protein: Q8IY21

DDX60, Probable ATP-dependent RNA helicase DDX60, humanhuman

Known RBP Predictions only

Length 1,712 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX60Q8IY21 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC28.25■■■□□ 2.11
DDX60Q8IY21 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC28.25■■■□□ 2.11
DDX60Q8IY21 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC28.24■■■□□ 2.11
DDX60Q8IY21 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC28.24■■■□□ 2.11
DDX60Q8IY21 AP003733.4-201ENST00000623785 1697 ntBASIC28.24■■■□□ 2.11
DDX60Q8IY21 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC28.24■■■□□ 2.11
DDX60Q8IY21 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC28.24■■■□□ 2.11
DDX60Q8IY21 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC28.24■■■□□ 2.11
DDX60Q8IY21 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC28.24■■■□□ 2.11
DDX60Q8IY21 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC28.24■■■□□ 2.11
DDX60Q8IY21 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC28.24■■■□□ 2.11
DDX60Q8IY21 AC020928.2-201ENST00000588717 2197 ntBASIC28.24■■■□□ 2.11
DDX60Q8IY21 ASB1-202ENST00000409297 878 ntTSL 5 BASIC28.23■■■□□ 2.11
DDX60Q8IY21 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC28.23■■■□□ 2.11
DDX60Q8IY21 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC28.23■■■□□ 2.11
DDX60Q8IY21 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC28.23■■■□□ 2.11
DDX60Q8IY21 BX842568.3-201ENST00000418104 571 ntBASIC28.23■■■□□ 2.11
DDX60Q8IY21 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC28.23■■■□□ 2.11
DDX60Q8IY21 PLD4-205ENST00000553861 667 ntTSL 2 BASIC28.23■■■□□ 2.11
DDX60Q8IY21 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC28.23■■■□□ 2.11
DDX60Q8IY21 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC28.22■■■□□ 2.11
DDX60Q8IY21 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC28.22■■■□□ 2.11
DDX60Q8IY21 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC28.22■■■□□ 2.11
DDX60Q8IY21 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC28.21■■■□□ 2.11
DDX60Q8IY21 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC28.21■■■□□ 2.11
DDX60Q8IY21 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC28.21■■■□□ 2.11
DDX60Q8IY21 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC28.21■■■□□ 2.11
DDX60Q8IY21 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC28.21■■■□□ 2.11
DDX60Q8IY21 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC28.21■■■□□ 2.11
DDX60Q8IY21 AC233992.3-201ENST00000607491 485 ntBASIC28.21■■■□□ 2.11
DDX60Q8IY21 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC28.2■■■□□ 2.11
DDX60Q8IY21 JTB-203ENST00000368589 1216 ntTSL 2 BASIC28.2■■■□□ 2.1
DDX60Q8IY21 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC28.2■■■□□ 2.1
DDX60Q8IY21 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC28.2■■■□□ 2.1
DDX60Q8IY21 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC28.2■■■□□ 2.1
DDX60Q8IY21 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC28.19■■■□□ 2.1
DDX60Q8IY21 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC28.19■■■□□ 2.1
DDX60Q8IY21 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC28.19■■■□□ 2.1
DDX60Q8IY21 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC28.19■■■□□ 2.1
DDX60Q8IY21 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC28.19■■■□□ 2.1
DDX60Q8IY21 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC28.19■■■□□ 2.1
DDX60Q8IY21 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC28.19■■■□□ 2.1
DDX60Q8IY21 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC28.18■■■□□ 2.1
DDX60Q8IY21 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC28.18■■■□□ 2.1
DDX60Q8IY21 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC28.18■■■□□ 2.1
DDX60Q8IY21 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC28.18■■■□□ 2.1
DDX60Q8IY21 IRS3P-201ENST00000223076 1006 ntBASIC28.18■■■□□ 2.1
DDX60Q8IY21 ANKRD20A6P-201ENST00000618763 204 ntBASIC28.18■■■□□ 2.1
DDX60Q8IY21 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC28.17■■■□□ 2.1
DDX60Q8IY21 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC28.17■■■□□ 2.1
DDX60Q8IY21 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC28.17■■■□□ 2.1
DDX60Q8IY21 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC28.17■■■□□ 2.1
DDX60Q8IY21 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC28.17■■■□□ 2.1
DDX60Q8IY21 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC28.17■■■□□ 2.1
DDX60Q8IY21 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC28.17■■■□□ 2.1
DDX60Q8IY21 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC28.17■■■□□ 2.1
DDX60Q8IY21 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC28.17■■■□□ 2.1
DDX60Q8IY21 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC28.17■■■□□ 2.1
DDX60Q8IY21 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC28.17■■■□□ 2.1
DDX60Q8IY21 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC28.16■■■□□ 2.1
DDX60Q8IY21 AC138932.3-201ENST00000567634 1902 ntBASIC28.16■■■□□ 2.1
DDX60Q8IY21 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC28.16■■■□□ 2.1
DDX60Q8IY21 HACD1-201ENST00000326961 773 ntTSL 2 BASIC28.16■■■□□ 2.1
DDX60Q8IY21 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC28.16■■■□□ 2.1
DDX60Q8IY21 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC28.16■■■□□ 2.1
DDX60Q8IY21 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC28.16■■■□□ 2.1
DDX60Q8IY21 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC28.16■■■□□ 2.1
DDX60Q8IY21 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC28.16■■■□□ 2.1
DDX60Q8IY21 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC28.15■■■□□ 2.1
DDX60Q8IY21 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC28.15■■■□□ 2.1
DDX60Q8IY21 pRNA.6-201ENST00000610482 90 ntBASIC28.15■■■□□ 2.1
DDX60Q8IY21 pRNA.5-201ENST00000612139 90 ntBASIC28.15■■■□□ 2.1
DDX60Q8IY21 pRNA.11-201ENST00000618423 90 ntBASIC28.15■■■□□ 2.1
DDX60Q8IY21 pRNA.13-201ENST00000619112 90 ntBASIC28.15■■■□□ 2.1
DDX60Q8IY21 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC28.15■■■□□ 2.1
DDX60Q8IY21 MED17-227ENST00000640521 2047 ntTSL 5 BASIC28.15■■■□□ 2.1
DDX60Q8IY21 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC28.15■■■□□ 2.1
DDX60Q8IY21 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC28.15■■■□□ 2.1
DDX60Q8IY21 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC28.15■■■□□ 2.1
DDX60Q8IY21 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC28.15■■■□□ 2.1
DDX60Q8IY21 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC28.15■■■□□ 2.1
DDX60Q8IY21 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC28.15■■■□□ 2.1
DDX60Q8IY21 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC28.15■■■□□ 2.1
DDX60Q8IY21 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC28.15■■■□□ 2.1
DDX60Q8IY21 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC28.14■■■□□ 2.1
DDX60Q8IY21 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC28.14■■■□□ 2.1
DDX60Q8IY21 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC28.14■■■□□ 2.1
DDX60Q8IY21 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC28.14■■■□□ 2.1
DDX60Q8IY21 MPST-208ENST00000628507 698 ntTSL 5 BASIC28.14■■■□□ 2.1
DDX60Q8IY21 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC28.13■■■□□ 2.09
DDX60Q8IY21 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC28.13■■■□□ 2.09
DDX60Q8IY21 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC28.13■■■□□ 2.09
DDX60Q8IY21 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC28.13■■■□□ 2.09
DDX60Q8IY21 EI24-213ENST00000618552 1747 ntTSL 5 BASIC28.12■■■□□ 2.09
DDX60Q8IY21 AL031602.1-201ENST00000633169 911 ntBASIC28.12■■■□□ 2.09
DDX60Q8IY21 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC28.12■■■□□ 2.09
DDX60Q8IY21 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC28.12■■■□□ 2.09
DDX60Q8IY21 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC28.12■■■□□ 2.09
DDX60Q8IY21 AL162430.1-201ENST00000480705 870 ntBASIC28.12■■■□□ 2.09
DDX60Q8IY21 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC28.12■■■□□ 2.09
Retrieved 100 of 98,524 protein–RNA pairs in 14.9 ms