Protein–RNA interactions for Protein: Q86WJ1

CHD1L, Chromodomain-helicase-DNA-binding protein 1-like, humanhuman

Predictions only

Length 897 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1LQ86WJ1 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC28■■■□□ 2.07
CHD1LQ86WJ1 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC28■■■□□ 2.07
CHD1LQ86WJ1 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC28■■■□□ 2.07
CHD1LQ86WJ1 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC28■■■□□ 2.07
CHD1LQ86WJ1 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC28■■■□□ 2.07
CHD1LQ86WJ1 USF2-207ENST00000595068 1612 ntTSL 5 BASIC28■■■□□ 2.07
CHD1LQ86WJ1 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC27.99■■■□□ 2.07
CHD1LQ86WJ1 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC27.99■■■□□ 2.07
CHD1LQ86WJ1 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC27.99■■■□□ 2.07
CHD1LQ86WJ1 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC27.99■■■□□ 2.07
CHD1LQ86WJ1 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC27.99■■■□□ 2.07
CHD1LQ86WJ1 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC27.99■■■□□ 2.07
CHD1LQ86WJ1 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC27.99■■■□□ 2.07
CHD1LQ86WJ1 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC27.99■■■□□ 2.07
CHD1LQ86WJ1 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC27.98■■■□□ 2.07
CHD1LQ86WJ1 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC27.98■■■□□ 2.07
CHD1LQ86WJ1 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC27.98■■■□□ 2.07
CHD1LQ86WJ1 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC27.98■■■□□ 2.07
CHD1LQ86WJ1 GALC-202ENST00000393568 2054 ntTSL 2 BASIC27.98■■■□□ 2.07
CHD1LQ86WJ1 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC27.98■■■□□ 2.07
CHD1LQ86WJ1 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC27.98■■■□□ 2.07
CHD1LQ86WJ1 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC27.98■■■□□ 2.07
CHD1LQ86WJ1 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC27.98■■■□□ 2.07
CHD1LQ86WJ1 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC27.97■■■□□ 2.07
CHD1LQ86WJ1 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC27.97■■■□□ 2.07
CHD1LQ86WJ1 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC27.97■■■□□ 2.07
CHD1LQ86WJ1 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC27.97■■■□□ 2.07
CHD1LQ86WJ1 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC27.97■■■□□ 2.07
CHD1LQ86WJ1 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC27.97■■■□□ 2.07
CHD1LQ86WJ1 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC27.97■■■□□ 2.07
CHD1LQ86WJ1 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC27.96■■■□□ 2.07
CHD1LQ86WJ1 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC27.96■■■□□ 2.07
CHD1LQ86WJ1 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC27.96■■■□□ 2.07
CHD1LQ86WJ1 AC079630.1-202ENST00000618127 1840 ntBASIC27.96■■■□□ 2.07
CHD1LQ86WJ1 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC27.96■■■□□ 2.07
CHD1LQ86WJ1 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC27.96■■■□□ 2.07
CHD1LQ86WJ1 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC27.96■■■□□ 2.07
CHD1LQ86WJ1 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC27.95■■■□□ 2.07
CHD1LQ86WJ1 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC27.95■■■□□ 2.07
CHD1LQ86WJ1 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC27.95■■■□□ 2.07
CHD1LQ86WJ1 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC27.95■■■□□ 2.06
CHD1LQ86WJ1 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC27.95■■■□□ 2.06
CHD1LQ86WJ1 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC27.95■■■□□ 2.06
CHD1LQ86WJ1 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC27.95■■■□□ 2.06
CHD1LQ86WJ1 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC27.95■■■□□ 2.06
CHD1LQ86WJ1 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC27.95■■■□□ 2.06
CHD1LQ86WJ1 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC27.95■■■□□ 2.06
CHD1LQ86WJ1 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC27.95■■■□□ 2.06
CHD1LQ86WJ1 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC27.95■■■□□ 2.06
CHD1LQ86WJ1 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC27.94■■■□□ 2.06
CHD1LQ86WJ1 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC27.94■■■□□ 2.06
CHD1LQ86WJ1 PRTG-204ENST00000561292 833 ntTSL 3 BASIC27.94■■■□□ 2.06
CHD1LQ86WJ1 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC27.94■■■□□ 2.06
CHD1LQ86WJ1 AC021242.3-201ENST00000607598 1377 ntBASIC27.94■■■□□ 2.06
CHD1LQ86WJ1 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC27.94■■■□□ 2.06
CHD1LQ86WJ1 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC27.94■■■□□ 2.06
CHD1LQ86WJ1 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC27.94■■■□□ 2.06
CHD1LQ86WJ1 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC27.94■■■□□ 2.06
CHD1LQ86WJ1 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC27.93■■■□□ 2.06
CHD1LQ86WJ1 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC27.93■■■□□ 2.06
CHD1LQ86WJ1 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC27.93■■■□□ 2.06
CHD1LQ86WJ1 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC27.93■■■□□ 2.06
CHD1LQ86WJ1 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC27.93■■■□□ 2.06
CHD1LQ86WJ1 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC27.93■■■□□ 2.06
CHD1LQ86WJ1 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC27.92■■■□□ 2.06
CHD1LQ86WJ1 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC27.92■■■□□ 2.06
CHD1LQ86WJ1 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC27.92■■■□□ 2.06
CHD1LQ86WJ1 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC27.92■■■□□ 2.06
CHD1LQ86WJ1 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC27.92■■■□□ 2.06
CHD1LQ86WJ1 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC27.92■■■□□ 2.06
CHD1LQ86WJ1 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC27.92■■■□□ 2.06
CHD1LQ86WJ1 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC27.92■■■□□ 2.06
CHD1LQ86WJ1 REST-206ENST00000612429 1376 ntTSL 5 BASIC27.92■■■□□ 2.06
CHD1LQ86WJ1 REST-207ENST00000616975 1370 ntTSL 5 BASIC27.92■■■□□ 2.06
CHD1LQ86WJ1 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC27.92■■■□□ 2.06
CHD1LQ86WJ1 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC27.92■■■□□ 2.06
CHD1LQ86WJ1 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC27.92■■■□□ 2.06
CHD1LQ86WJ1 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC27.92■■■□□ 2.06
CHD1LQ86WJ1 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC27.92■■■□□ 2.06
CHD1LQ86WJ1 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC27.91■■■□□ 2.06
CHD1LQ86WJ1 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC27.91■■■□□ 2.06
CHD1LQ86WJ1 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC27.91■■■□□ 2.06
CHD1LQ86WJ1 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC27.91■■■□□ 2.06
CHD1LQ86WJ1 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC27.91■■■□□ 2.06
CHD1LQ86WJ1 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC27.91■■■□□ 2.06
CHD1LQ86WJ1 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC27.9■■■□□ 2.06
CHD1LQ86WJ1 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC27.9■■■□□ 2.06
CHD1LQ86WJ1 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC27.9■■■□□ 2.06
CHD1LQ86WJ1 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC27.9■■■□□ 2.06
CHD1LQ86WJ1 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC27.9■■■□□ 2.06
CHD1LQ86WJ1 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC27.9■■■□□ 2.06
CHD1LQ86WJ1 C1orf229-201ENST00000623686 2258 ntBASIC27.9■■■□□ 2.06
CHD1LQ86WJ1 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC27.9■■■□□ 2.06
CHD1LQ86WJ1 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC27.9■■■□□ 2.06
CHD1LQ86WJ1 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC27.89■■■□□ 2.06
CHD1LQ86WJ1 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC27.89■■■□□ 2.06
CHD1LQ86WJ1 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC27.89■■■□□ 2.06
CHD1LQ86WJ1 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC27.89■■■□□ 2.06
CHD1LQ86WJ1 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC27.89■■■□□ 2.06
CHD1LQ86WJ1 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC27.89■■■□□ 2.06
Retrieved 100 of 98,524 protein–RNA pairs in 61.2 ms