Protein–RNA interactions for Protein: Q6PJG9

LRFN4, Leucine-rich repeat and fibronectin type-III domain-containing protein 4, humanhuman

Predictions only

Length 635 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN4Q6PJG9 BX664725.1-201ENST00000438252 379 ntBASIC20.21■□□□□ 0.83
LRFN4Q6PJG9 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC20.21■□□□□ 0.83
LRFN4Q6PJG9 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC20.21■□□□□ 0.83
LRFN4Q6PJG9 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
LRFN4Q6PJG9 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
LRFN4Q6PJG9 AL451085.2-201ENST00000605085 799 ntBASIC20.21■□□□□ 0.83
LRFN4Q6PJG9 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
LRFN4Q6PJG9 ALDH1A3-203ENST00000557963 1670 ntBASIC20.21■□□□□ 0.83
LRFN4Q6PJG9 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
LRFN4Q6PJG9 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
LRFN4Q6PJG9 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
LRFN4Q6PJG9 DUSP8P5-201ENST00000422884 1815 ntBASIC20.2■□□□□ 0.82
LRFN4Q6PJG9 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
LRFN4Q6PJG9 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
LRFN4Q6PJG9 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC20.2■□□□□ 0.82
LRFN4Q6PJG9 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC20.2■□□□□ 0.82
LRFN4Q6PJG9 SNX5-217ENST00000606557 1087 ntBASIC20.2■□□□□ 0.82
LRFN4Q6PJG9 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC20.2■□□□□ 0.82
LRFN4Q6PJG9 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
LRFN4Q6PJG9 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC20.2■□□□□ 0.82
LRFN4Q6PJG9 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
LRFN4Q6PJG9 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
LRFN4Q6PJG9 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC20.19■□□□□ 0.82
LRFN4Q6PJG9 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
LRFN4Q6PJG9 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
LRFN4Q6PJG9 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
LRFN4Q6PJG9 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
LRFN4Q6PJG9 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
LRFN4Q6PJG9 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
LRFN4Q6PJG9 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC20.19■□□□□ 0.82
LRFN4Q6PJG9 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC20.19■□□□□ 0.82
LRFN4Q6PJG9 AC009299.2-201ENST00000482477 511 ntBASIC20.19■□□□□ 0.82
LRFN4Q6PJG9 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC20.19■□□□□ 0.82
LRFN4Q6PJG9 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC20.19■□□□□ 0.82
LRFN4Q6PJG9 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
LRFN4Q6PJG9 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
LRFN4Q6PJG9 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC20.18■□□□□ 0.82
LRFN4Q6PJG9 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
LRFN4Q6PJG9 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
LRFN4Q6PJG9 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC20.18■□□□□ 0.82
LRFN4Q6PJG9 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC20.18■□□□□ 0.82
LRFN4Q6PJG9 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
LRFN4Q6PJG9 Z92544.1-202ENST00000571933 1220 ntBASIC20.18■□□□□ 0.82
LRFN4Q6PJG9 LSM7-203ENST00000585409 512 ntTSL 2 BASIC20.18■□□□□ 0.82
LRFN4Q6PJG9 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC20.18■□□□□ 0.82
LRFN4Q6PJG9 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC20.18■□□□□ 0.82
LRFN4Q6PJG9 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC20.18■□□□□ 0.82
LRFN4Q6PJG9 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
LRFN4Q6PJG9 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC20.17■□□□□ 0.82
LRFN4Q6PJG9 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
LRFN4Q6PJG9 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC20.17■□□□□ 0.82
LRFN4Q6PJG9 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
LRFN4Q6PJG9 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC20.17■□□□□ 0.82
LRFN4Q6PJG9 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC20.17■□□□□ 0.82
LRFN4Q6PJG9 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
LRFN4Q6PJG9 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC20.17■□□□□ 0.82
LRFN4Q6PJG9 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
LRFN4Q6PJG9 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC20.16■□□□□ 0.82
LRFN4Q6PJG9 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
LRFN4Q6PJG9 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC20.16■□□□□ 0.82
LRFN4Q6PJG9 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC20.16■□□□□ 0.82
LRFN4Q6PJG9 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
LRFN4Q6PJG9 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
LRFN4Q6PJG9 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
LRFN4Q6PJG9 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
LRFN4Q6PJG9 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
LRFN4Q6PJG9 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
LRFN4Q6PJG9 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC20.16■□□□□ 0.82
LRFN4Q6PJG9 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC20.16■□□□□ 0.82
LRFN4Q6PJG9 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC20.16■□□□□ 0.82
LRFN4Q6PJG9 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
LRFN4Q6PJG9 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
LRFN4Q6PJG9 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
LRFN4Q6PJG9 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
LRFN4Q6PJG9 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
LRFN4Q6PJG9 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC20.15■□□□□ 0.82
LRFN4Q6PJG9 AC239859.2-201ENST00000444165 318 ntBASIC20.15■□□□□ 0.82
LRFN4Q6PJG9 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
LRFN4Q6PJG9 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC20.15■□□□□ 0.82
LRFN4Q6PJG9 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
LRFN4Q6PJG9 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
LRFN4Q6PJG9 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.82
LRFN4Q6PJG9 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
LRFN4Q6PJG9 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
LRFN4Q6PJG9 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
LRFN4Q6PJG9 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
LRFN4Q6PJG9 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC20.14■□□□□ 0.81
LRFN4Q6PJG9 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC20.14■□□□□ 0.81
LRFN4Q6PJG9 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC20.14■□□□□ 0.81
LRFN4Q6PJG9 CLTA-210ENST00000540080 989 ntTSL 2 BASIC20.14■□□□□ 0.81
LRFN4Q6PJG9 KRT125P-201ENST00000546827 989 ntBASIC20.14■□□□□ 0.81
LRFN4Q6PJG9 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
LRFN4Q6PJG9 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC20.14■□□□□ 0.81
LRFN4Q6PJG9 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
LRFN4Q6PJG9 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC20.13■□□□□ 0.81
LRFN4Q6PJG9 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
LRFN4Q6PJG9 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC20.13■□□□□ 0.81
LRFN4Q6PJG9 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC20.13■□□□□ 0.81
LRFN4Q6PJG9 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
LRFN4Q6PJG9 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC20.13■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 15 ms