Protein–RNA interactions for Protein: Q643R3

LPCAT4, Lysophospholipid acyltransferase LPCAT4, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT4Q643R3 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC21.28■■□□□ 1
LPCAT4Q643R3 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC21.28■■□□□ 1
LPCAT4Q643R3 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
LPCAT4Q643R3 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC21.28■■□□□ 1
LPCAT4Q643R3 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC21.27■■□□□ 1
LPCAT4Q643R3 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC21.27■■□□□ 1
LPCAT4Q643R3 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
LPCAT4Q643R3 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC21.27■■□□□ 1
LPCAT4Q643R3 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
LPCAT4Q643R3 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC21.27■□□□□ 0.99
LPCAT4Q643R3 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
LPCAT4Q643R3 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC21.27■□□□□ 0.99
LPCAT4Q643R3 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC21.26■□□□□ 0.99
LPCAT4Q643R3 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
LPCAT4Q643R3 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
LPCAT4Q643R3 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC21.26■□□□□ 0.99
LPCAT4Q643R3 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC21.26■□□□□ 0.99
LPCAT4Q643R3 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
LPCAT4Q643R3 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC21.26■□□□□ 0.99
LPCAT4Q643R3 AC139530.1-201ENST00000575312 1977 ntBASIC21.26■□□□□ 0.99
LPCAT4Q643R3 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
LPCAT4Q643R3 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
LPCAT4Q643R3 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC21.26■□□□□ 0.99
LPCAT4Q643R3 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC21.26■□□□□ 0.99
LPCAT4Q643R3 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
LPCAT4Q643R3 AC026310.3-201ENST00000625186 2373 ntBASIC21.25■□□□□ 0.99
LPCAT4Q643R3 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC21.25■□□□□ 0.99
LPCAT4Q643R3 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC21.25■□□□□ 0.99
LPCAT4Q643R3 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
LPCAT4Q643R3 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC21.25■□□□□ 0.99
LPCAT4Q643R3 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC21.25■□□□□ 0.99
LPCAT4Q643R3 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC21.25■□□□□ 0.99
LPCAT4Q643R3 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
LPCAT4Q643R3 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC21.25■□□□□ 0.99
LPCAT4Q643R3 DUX4L13-201ENST00000554103 1267 ntBASIC21.25■□□□□ 0.99
LPCAT4Q643R3 DUX4L15-201ENST00000611059 1267 ntBASIC21.25■□□□□ 0.99
LPCAT4Q643R3 DUX4L23-201ENST00000615195 1269 ntBASIC21.25■□□□□ 0.99
LPCAT4Q643R3 DUX4L24-201ENST00000617576 1269 ntBASIC21.25■□□□□ 0.99
LPCAT4Q643R3 LINC01971-201ENST00000617888 1048 ntBASIC21.25■□□□□ 0.99
LPCAT4Q643R3 DUX4L22-201ENST00000618238 1269 ntBASIC21.25■□□□□ 0.99
LPCAT4Q643R3 DUX4L20-201ENST00000619712 1269 ntBASIC21.25■□□□□ 0.99
LPCAT4Q643R3 DUX4L21-201ENST00000622058 1269 ntBASIC21.25■□□□□ 0.99
LPCAT4Q643R3 DUX4L10-201ENST00000622460 1267 ntBASIC21.25■□□□□ 0.99
LPCAT4Q643R3 DUX4L25-201ENST00000624915 1269 ntBASIC21.25■□□□□ 0.99
LPCAT4Q643R3 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
LPCAT4Q643R3 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC21.25■□□□□ 0.99
LPCAT4Q643R3 AC092053.2-201ENST00000640557 1818 ntBASIC21.25■□□□□ 0.99
LPCAT4Q643R3 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC21.24■□□□□ 0.99
LPCAT4Q643R3 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
LPCAT4Q643R3 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC21.24■□□□□ 0.99
LPCAT4Q643R3 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
LPCAT4Q643R3 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
LPCAT4Q643R3 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
LPCAT4Q643R3 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
LPCAT4Q643R3 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC21.23■□□□□ 0.99
LPCAT4Q643R3 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC21.23■□□□□ 0.99
LPCAT4Q643R3 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
LPCAT4Q643R3 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
LPCAT4Q643R3 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC21.23■□□□□ 0.99
LPCAT4Q643R3 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC21.23■□□□□ 0.99
LPCAT4Q643R3 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC21.23■□□□□ 0.99
LPCAT4Q643R3 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
LPCAT4Q643R3 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
LPCAT4Q643R3 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC21.23■□□□□ 0.99
LPCAT4Q643R3 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
LPCAT4Q643R3 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
LPCAT4Q643R3 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
LPCAT4Q643R3 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
LPCAT4Q643R3 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
LPCAT4Q643R3 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
LPCAT4Q643R3 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
LPCAT4Q643R3 PALM-208ENST00000592155 2272 ntTSL 4 BASIC21.22■□□□□ 0.99
LPCAT4Q643R3 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC21.22■□□□□ 0.99
LPCAT4Q643R3 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC21.22■□□□□ 0.99
LPCAT4Q643R3 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
LPCAT4Q643R3 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC21.22■□□□□ 0.99
LPCAT4Q643R3 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC21.22■□□□□ 0.99
LPCAT4Q643R3 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC21.22■□□□□ 0.99
LPCAT4Q643R3 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
LPCAT4Q643R3 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC21.22■□□□□ 0.99
LPCAT4Q643R3 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
LPCAT4Q643R3 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC21.22■□□□□ 0.99
LPCAT4Q643R3 AL121603.2-201ENST00000557373 2117 ntBASIC21.22■□□□□ 0.99
LPCAT4Q643R3 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC21.21■□□□□ 0.99
LPCAT4Q643R3 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC21.21■□□□□ 0.99
LPCAT4Q643R3 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
LPCAT4Q643R3 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
LPCAT4Q643R3 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
LPCAT4Q643R3 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
LPCAT4Q643R3 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
LPCAT4Q643R3 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC21.21■□□□□ 0.99
LPCAT4Q643R3 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC21.21■□□□□ 0.99
LPCAT4Q643R3 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC21.21■□□□□ 0.99
LPCAT4Q643R3 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
LPCAT4Q643R3 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC21.2■□□□□ 0.98
LPCAT4Q643R3 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
LPCAT4Q643R3 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
LPCAT4Q643R3 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC21.2■□□□□ 0.98
LPCAT4Q643R3 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
LPCAT4Q643R3 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 28.3 ms