Protein–RNA interactions for Protein: Q5VWM5

PRAMEF9, PRAME family member 9/15, humanhuman

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF9Q5VWM5 REST-206ENST00000612429 1376 ntTSL 5 BASIC21.83■■□□□ 1.08
PRAMEF9Q5VWM5 REST-207ENST00000616975 1370 ntTSL 5 BASIC21.83■■□□□ 1.08
PRAMEF9Q5VWM5 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC21.83■■□□□ 1.08
PRAMEF9Q5VWM5 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC21.83■■□□□ 1.08
PRAMEF9Q5VWM5 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC21.83■■□□□ 1.08
PRAMEF9Q5VWM5 AC068473.5-201ENST00000616428 2072 ntBASIC21.83■■□□□ 1.08
PRAMEF9Q5VWM5 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
PRAMEF9Q5VWM5 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
PRAMEF9Q5VWM5 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC21.82■■□□□ 1.08
PRAMEF9Q5VWM5 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC21.82■■□□□ 1.08
PRAMEF9Q5VWM5 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC21.82■■□□□ 1.08
PRAMEF9Q5VWM5 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC21.82■■□□□ 1.08
PRAMEF9Q5VWM5 MIR4787-201ENST00000607364 84 ntBASIC21.82■■□□□ 1.08
PRAMEF9Q5VWM5 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC21.82■■□□□ 1.08
PRAMEF9Q5VWM5 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC21.82■■□□□ 1.08
PRAMEF9Q5VWM5 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC21.81■■□□□ 1.08
PRAMEF9Q5VWM5 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
PRAMEF9Q5VWM5 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
PRAMEF9Q5VWM5 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC21.81■■□□□ 1.08
PRAMEF9Q5VWM5 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
PRAMEF9Q5VWM5 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC21.81■■□□□ 1.08
PRAMEF9Q5VWM5 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC21.81■■□□□ 1.08
PRAMEF9Q5VWM5 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
PRAMEF9Q5VWM5 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
PRAMEF9Q5VWM5 DUSP8P3-201ENST00000399571 1760 ntBASIC21.81■■□□□ 1.08
PRAMEF9Q5VWM5 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC21.81■■□□□ 1.08
PRAMEF9Q5VWM5 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC21.8■■□□□ 1.08
PRAMEF9Q5VWM5 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC21.8■■□□□ 1.08
PRAMEF9Q5VWM5 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC21.8■■□□□ 1.08
PRAMEF9Q5VWM5 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
PRAMEF9Q5VWM5 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC21.8■■□□□ 1.08
PRAMEF9Q5VWM5 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC21.8■■□□□ 1.08
PRAMEF9Q5VWM5 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
PRAMEF9Q5VWM5 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
PRAMEF9Q5VWM5 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC21.8■■□□□ 1.08
PRAMEF9Q5VWM5 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
PRAMEF9Q5VWM5 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
PRAMEF9Q5VWM5 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC21.79■■□□□ 1.08
PRAMEF9Q5VWM5 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
PRAMEF9Q5VWM5 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
PRAMEF9Q5VWM5 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC21.79■■□□□ 1.08
PRAMEF9Q5VWM5 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC21.79■■□□□ 1.08
PRAMEF9Q5VWM5 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
PRAMEF9Q5VWM5 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
PRAMEF9Q5VWM5 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
PRAMEF9Q5VWM5 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
PRAMEF9Q5VWM5 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC21.78■■□□□ 1.08
PRAMEF9Q5VWM5 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
PRAMEF9Q5VWM5 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC21.78■■□□□ 1.08
PRAMEF9Q5VWM5 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
PRAMEF9Q5VWM5 KRT125P-201ENST00000546827 989 ntBASIC21.78■■□□□ 1.08
PRAMEF9Q5VWM5 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
PRAMEF9Q5VWM5 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
PRAMEF9Q5VWM5 AC079630.1-202ENST00000618127 1840 ntBASIC21.78■■□□□ 1.08
PRAMEF9Q5VWM5 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
PRAMEF9Q5VWM5 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
PRAMEF9Q5VWM5 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
PRAMEF9Q5VWM5 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
PRAMEF9Q5VWM5 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC21.77■■□□□ 1.08
PRAMEF9Q5VWM5 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC21.77■■□□□ 1.07
PRAMEF9Q5VWM5 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
PRAMEF9Q5VWM5 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC21.76■■□□□ 1.07
PRAMEF9Q5VWM5 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC21.76■■□□□ 1.07
PRAMEF9Q5VWM5 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
PRAMEF9Q5VWM5 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
PRAMEF9Q5VWM5 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
PRAMEF9Q5VWM5 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC21.76■■□□□ 1.07
PRAMEF9Q5VWM5 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC21.76■■□□□ 1.07
PRAMEF9Q5VWM5 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC21.76■■□□□ 1.07
PRAMEF9Q5VWM5 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
PRAMEF9Q5VWM5 AL035685.1-201ENST00000636663 812 ntBASIC21.76■■□□□ 1.07
PRAMEF9Q5VWM5 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
PRAMEF9Q5VWM5 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
PRAMEF9Q5VWM5 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC21.75■■□□□ 1.07
PRAMEF9Q5VWM5 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC21.75■■□□□ 1.07
PRAMEF9Q5VWM5 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
PRAMEF9Q5VWM5 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC21.75■■□□□ 1.07
PRAMEF9Q5VWM5 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC21.75■■□□□ 1.07
PRAMEF9Q5VWM5 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC21.75■■□□□ 1.07
PRAMEF9Q5VWM5 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
PRAMEF9Q5VWM5 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC21.74■■□□□ 1.07
PRAMEF9Q5VWM5 CREM-229ENST00000474362 1030 ntTSL 2 BASIC21.74■■□□□ 1.07
PRAMEF9Q5VWM5 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC21.74■■□□□ 1.07
PRAMEF9Q5VWM5 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
PRAMEF9Q5VWM5 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
PRAMEF9Q5VWM5 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
PRAMEF9Q5VWM5 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
PRAMEF9Q5VWM5 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
PRAMEF9Q5VWM5 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC21.73■■□□□ 1.07
PRAMEF9Q5VWM5 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
PRAMEF9Q5VWM5 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC21.73■■□□□ 1.07
PRAMEF9Q5VWM5 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
PRAMEF9Q5VWM5 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC21.73■■□□□ 1.07
PRAMEF9Q5VWM5 OR2A1-AS1-204ENST00000470435 602 ntBASIC21.73■■□□□ 1.07
PRAMEF9Q5VWM5 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC21.73■■□□□ 1.07
PRAMEF9Q5VWM5 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
PRAMEF9Q5VWM5 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
PRAMEF9Q5VWM5 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
PRAMEF9Q5VWM5 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
PRAMEF9Q5VWM5 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC21.73■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 68.5 ms