Protein–RNA interactions for Protein: Q5THJ4

VPS13D, Vacuolar protein sorting-associated protein 13D, humanhuman

Predictions only

Length 4,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13DQ5THJ4 KRT18P14-201ENST00000534205 1250 ntBASIC15.45■□□□□ 0.06
VPS13DQ5THJ4 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC15.45■□□□□ 0.06
VPS13DQ5THJ4 AK1-201ENST00000223836 736 ntTSL 3 BASIC15.44■□□□□ 0.06
VPS13DQ5THJ4 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC15.44■□□□□ 0.06
VPS13DQ5THJ4 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC15.44■□□□□ 0.06
VPS13DQ5THJ4 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC15.44■□□□□ 0.06
VPS13DQ5THJ4 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
VPS13DQ5THJ4 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC15.44■□□□□ 0.06
VPS13DQ5THJ4 HOOK2-201ENST00000264827 2603 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
VPS13DQ5THJ4 HDGF-201ENST00000357325 2380 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
VPS13DQ5THJ4 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
VPS13DQ5THJ4 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC15.44■□□□□ 0.06
VPS13DQ5THJ4 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC15.43■□□□□ 0.06
VPS13DQ5THJ4 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
VPS13DQ5THJ4 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
VPS13DQ5THJ4 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC15.43■□□□□ 0.06
VPS13DQ5THJ4 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC15.43■□□□□ 0.06
VPS13DQ5THJ4 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
VPS13DQ5THJ4 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
VPS13DQ5THJ4 AL137784.2-201ENST00000607332 1000 ntBASIC15.43■□□□□ 0.06
VPS13DQ5THJ4 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
VPS13DQ5THJ4 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
VPS13DQ5THJ4 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
VPS13DQ5THJ4 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
VPS13DQ5THJ4 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
VPS13DQ5THJ4 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC15.42■□□□□ 0.06
VPS13DQ5THJ4 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC15.42■□□□□ 0.06
VPS13DQ5THJ4 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
VPS13DQ5THJ4 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
VPS13DQ5THJ4 HLA-L-211ENST00000482052 1765 ntBASIC15.42■□□□□ 0.06
VPS13DQ5THJ4 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
VPS13DQ5THJ4 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
VPS13DQ5THJ4 RAB40C-204ENST00000538492 2569 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
VPS13DQ5THJ4 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
VPS13DQ5THJ4 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC15.41■□□□□ 0.06
VPS13DQ5THJ4 CDCA4P2-201ENST00000441182 718 ntBASIC15.41■□□□□ 0.06
VPS13DQ5THJ4 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC15.41■□□□□ 0.06
VPS13DQ5THJ4 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
VPS13DQ5THJ4 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC15.41■□□□□ 0.06
VPS13DQ5THJ4 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
VPS13DQ5THJ4 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC15.41■□□□□ 0.06
VPS13DQ5THJ4 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
VPS13DQ5THJ4 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC15.41■□□□□ 0.06
VPS13DQ5THJ4 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC15.41■□□□□ 0.06
VPS13DQ5THJ4 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC15.41■□□□□ 0.06
VPS13DQ5THJ4 CEBPA-AS1-201ENST00000592982 2198 ntBASIC15.41■□□□□ 0.06
VPS13DQ5THJ4 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC15.41■□□□□ 0.06
VPS13DQ5THJ4 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
VPS13DQ5THJ4 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
VPS13DQ5THJ4 FBXW5-201ENST00000325285 2274 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
VPS13DQ5THJ4 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
VPS13DQ5THJ4 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
VPS13DQ5THJ4 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
VPS13DQ5THJ4 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
VPS13DQ5THJ4 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC15.4■□□□□ 0.06
VPS13DQ5THJ4 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC15.4■□□□□ 0.06
VPS13DQ5THJ4 DYRK2-203ENST00000393555 2209 ntAPPRIS ALT1 TSL 1 (best) BASIC15.4■□□□□ 0.06
VPS13DQ5THJ4 RCC1L-201ENST00000610322 2300 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
VPS13DQ5THJ4 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
VPS13DQ5THJ4 PLSCR3-214ENST00000619711 2066 ntTSL 5 BASIC15.39■□□□□ 0.05
VPS13DQ5THJ4 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
VPS13DQ5THJ4 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
VPS13DQ5THJ4 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
VPS13DQ5THJ4 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC15.39■□□□□ 0.05
VPS13DQ5THJ4 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC15.39■□□□□ 0.05
VPS13DQ5THJ4 LSR-205ENST00000427250 1606 ntTSL 2 BASIC15.39■□□□□ 0.05
VPS13DQ5THJ4 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC15.39■□□□□ 0.05
VPS13DQ5THJ4 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC15.39■□□□□ 0.05
VPS13DQ5THJ4 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC15.39■□□□□ 0.05
VPS13DQ5THJ4 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC15.39■□□□□ 0.05
VPS13DQ5THJ4 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC15.39■□□□□ 0.05
VPS13DQ5THJ4 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC15.39■□□□□ 0.05
VPS13DQ5THJ4 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
VPS13DQ5THJ4 ROM1-201ENST00000278833 1878 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
VPS13DQ5THJ4 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
VPS13DQ5THJ4 CCDC92B-201ENST00000575506 885 ntBASIC15.39■□□□□ 0.05
VPS13DQ5THJ4 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC15.39■□□□□ 0.05
VPS13DQ5THJ4 HOXB3-201ENST00000311626 2642 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
VPS13DQ5THJ4 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
VPS13DQ5THJ4 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
VPS13DQ5THJ4 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
VPS13DQ5THJ4 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC15.38■□□□□ 0.05
VPS13DQ5THJ4 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
VPS13DQ5THJ4 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC15.38■□□□□ 0.05
VPS13DQ5THJ4 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
VPS13DQ5THJ4 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
VPS13DQ5THJ4 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
VPS13DQ5THJ4 AC241377.3-202ENST00000626088 1088 ntBASIC15.38■□□□□ 0.05
VPS13DQ5THJ4 AC241585.3-202ENST00000628937 1088 ntBASIC15.38■□□□□ 0.05
VPS13DQ5THJ4 AC245100.8-202ENST00000629247 1058 ntBASIC15.38■□□□□ 0.05
VPS13DQ5THJ4 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC15.38■□□□□ 0.05
VPS13DQ5THJ4 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
VPS13DQ5THJ4 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC15.38■□□□□ 0.05
VPS13DQ5THJ4 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC15.38■□□□□ 0.05
VPS13DQ5THJ4 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
VPS13DQ5THJ4 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC15.37■□□□□ 0.05
VPS13DQ5THJ4 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
VPS13DQ5THJ4 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC15.37■□□□□ 0.05
VPS13DQ5THJ4 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC15.37■□□□□ 0.05
VPS13DQ5THJ4 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC15.37■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 34.6 ms