Protein–RNA interactions for Protein: P68431

HIST1H3A, Histone H3.1, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H3AP68431 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
HIST1H3AP68431 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC19.77■□□□□ 0.76
HIST1H3AP68431 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
HIST1H3AP68431 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC19.77■□□□□ 0.76
HIST1H3AP68431 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.75
HIST1H3AP68431 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.75
HIST1H3AP68431 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
HIST1H3AP68431 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
HIST1H3AP68431 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
HIST1H3AP68431 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
HIST1H3AP68431 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
HIST1H3AP68431 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
HIST1H3AP68431 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
HIST1H3AP68431 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
HIST1H3AP68431 AC092028.1-203ENST00000608262 953 ntBASIC19.76■□□□□ 0.75
HIST1H3AP68431 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC19.76■□□□□ 0.75
HIST1H3AP68431 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
HIST1H3AP68431 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
HIST1H3AP68431 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC19.75■□□□□ 0.75
HIST1H3AP68431 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
HIST1H3AP68431 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC19.75■□□□□ 0.75
HIST1H3AP68431 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
HIST1H3AP68431 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
HIST1H3AP68431 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
HIST1H3AP68431 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC19.75■□□□□ 0.75
HIST1H3AP68431 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC19.75■□□□□ 0.75
HIST1H3AP68431 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
HIST1H3AP68431 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
HIST1H3AP68431 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
HIST1H3AP68431 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
HIST1H3AP68431 AC068473.5-201ENST00000616428 2072 ntBASIC19.75■□□□□ 0.75
HIST1H3AP68431 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
HIST1H3AP68431 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC19.75■□□□□ 0.75
HIST1H3AP68431 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
HIST1H3AP68431 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
HIST1H3AP68431 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
HIST1H3AP68431 CLTA-206ENST00000466396 695 ntTSL 2 BASIC19.74■□□□□ 0.75
HIST1H3AP68431 AL451085.2-201ENST00000605085 799 ntBASIC19.74■□□□□ 0.75
HIST1H3AP68431 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC19.74■□□□□ 0.75
HIST1H3AP68431 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
HIST1H3AP68431 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC19.74■□□□□ 0.75
HIST1H3AP68431 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
HIST1H3AP68431 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
HIST1H3AP68431 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC19.74■□□□□ 0.75
HIST1H3AP68431 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
HIST1H3AP68431 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
HIST1H3AP68431 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
HIST1H3AP68431 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC19.73■□□□□ 0.75
HIST1H3AP68431 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC19.73■□□□□ 0.75
HIST1H3AP68431 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC19.73■□□□□ 0.75
HIST1H3AP68431 AC009299.2-201ENST00000482477 511 ntBASIC19.73■□□□□ 0.75
HIST1H3AP68431 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC19.73■□□□□ 0.75
HIST1H3AP68431 KRT125P-201ENST00000546827 989 ntBASIC19.73■□□□□ 0.75
HIST1H3AP68431 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
HIST1H3AP68431 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
HIST1H3AP68431 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
HIST1H3AP68431 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC19.73■□□□□ 0.75
HIST1H3AP68431 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
HIST1H3AP68431 AC012676.1-201ENST00000574705 1949 ntBASIC19.72■□□□□ 0.75
HIST1H3AP68431 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
HIST1H3AP68431 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
HIST1H3AP68431 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
HIST1H3AP68431 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
HIST1H3AP68431 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC19.72■□□□□ 0.75
HIST1H3AP68431 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
HIST1H3AP68431 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
HIST1H3AP68431 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC19.71■□□□□ 0.75
HIST1H3AP68431 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC19.71■□□□□ 0.75
HIST1H3AP68431 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC19.71■□□□□ 0.75
HIST1H3AP68431 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
HIST1H3AP68431 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
HIST1H3AP68431 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
HIST1H3AP68431 MIR4787-201ENST00000607364 84 ntBASIC19.71■□□□□ 0.75
HIST1H3AP68431 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
HIST1H3AP68431 AC079630.1-202ENST00000618127 1840 ntBASIC19.71■□□□□ 0.75
HIST1H3AP68431 AC005703.6-201ENST00000623265 1329 ntBASIC19.71■□□□□ 0.75
HIST1H3AP68431 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC19.71■□□□□ 0.75
HIST1H3AP68431 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
HIST1H3AP68431 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
HIST1H3AP68431 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC19.7■□□□□ 0.74
HIST1H3AP68431 AC239859.2-201ENST00000444165 318 ntBASIC19.7■□□□□ 0.74
HIST1H3AP68431 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC19.7■□□□□ 0.74
HIST1H3AP68431 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC19.7■□□□□ 0.74
HIST1H3AP68431 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
HIST1H3AP68431 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC19.7■□□□□ 0.74
HIST1H3AP68431 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC19.7■□□□□ 0.74
HIST1H3AP68431 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
HIST1H3AP68431 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
HIST1H3AP68431 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
HIST1H3AP68431 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
HIST1H3AP68431 ME2-208ENST00000638937 2471 ntTSL 5 BASIC19.69■□□□□ 0.74
HIST1H3AP68431 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
HIST1H3AP68431 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
HIST1H3AP68431 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
HIST1H3AP68431 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
HIST1H3AP68431 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
HIST1H3AP68431 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
HIST1H3AP68431 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
HIST1H3AP68431 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
HIST1H3AP68431 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC19.69■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 13.7 ms