Protein–RNA interactions for Protein: P62987

UBA52, Ubiquitin-60S ribosomal protein L40, humanhuman

Known RBP Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBA52P62987 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
UBA52P62987 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
UBA52P62987 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
UBA52P62987 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC19.31■□□□□ 0.68
UBA52P62987 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
UBA52P62987 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
UBA52P62987 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
UBA52P62987 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
UBA52P62987 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
UBA52P62987 AC004812.2-201ENST00000611079 2094 ntBASIC19.3■□□□□ 0.68
UBA52P62987 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
UBA52P62987 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
UBA52P62987 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC19.3■□□□□ 0.68
UBA52P62987 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC19.3■□□□□ 0.68
UBA52P62987 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC19.3■□□□□ 0.68
UBA52P62987 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
UBA52P62987 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC19.3■□□□□ 0.68
UBA52P62987 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
UBA52P62987 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
UBA52P62987 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
UBA52P62987 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
UBA52P62987 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
UBA52P62987 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
UBA52P62987 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC19.29■□□□□ 0.68
UBA52P62987 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC19.29■□□□□ 0.68
UBA52P62987 HSBP1L1-201ENST00000451882 771 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
UBA52P62987 LSM7-203ENST00000585409 512 ntTSL 2 BASIC19.29■□□□□ 0.68
UBA52P62987 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
UBA52P62987 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
UBA52P62987 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC19.29■□□□□ 0.68
UBA52P62987 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC19.29■□□□□ 0.68
UBA52P62987 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
UBA52P62987 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
UBA52P62987 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC19.28■□□□□ 0.68
UBA52P62987 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
UBA52P62987 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC19.28■□□□□ 0.68
UBA52P62987 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC19.28■□□□□ 0.68
UBA52P62987 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
UBA52P62987 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
UBA52P62987 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC19.28■□□□□ 0.68
UBA52P62987 AC127496.7-201ENST00000625110 1798 ntBASIC19.28■□□□□ 0.68
UBA52P62987 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC19.28■□□□□ 0.68
UBA52P62987 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC19.28■□□□□ 0.68
UBA52P62987 MED17-221ENST00000639724 2317 ntTSL 5 BASIC19.28■□□□□ 0.68
UBA52P62987 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC19.27■□□□□ 0.68
UBA52P62987 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
UBA52P62987 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
UBA52P62987 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC19.27■□□□□ 0.68
UBA52P62987 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
UBA52P62987 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC19.27■□□□□ 0.68
UBA52P62987 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC19.27■□□□□ 0.68
UBA52P62987 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC19.27■□□□□ 0.68
UBA52P62987 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
UBA52P62987 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
UBA52P62987 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
UBA52P62987 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
UBA52P62987 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
UBA52P62987 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC19.27■□□□□ 0.67
UBA52P62987 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.67
UBA52P62987 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
UBA52P62987 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC19.26■□□□□ 0.67
UBA52P62987 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
UBA52P62987 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
UBA52P62987 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC19.26■□□□□ 0.67
UBA52P62987 KRT18P24-201ENST00000344739 1156 ntBASIC19.26■□□□□ 0.67
UBA52P62987 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC19.26■□□□□ 0.67
UBA52P62987 KRT16P3-201ENST00000439127 1283 ntBASIC19.26■□□□□ 0.67
UBA52P62987 UNC93B8-201ENST00000511903 705 ntBASIC19.26■□□□□ 0.67
UBA52P62987 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC19.26■□□□□ 0.67
UBA52P62987 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC19.26■□□□□ 0.67
UBA52P62987 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
UBA52P62987 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
UBA52P62987 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
UBA52P62987 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
UBA52P62987 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
UBA52P62987 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC19.25■□□□□ 0.67
UBA52P62987 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC19.25■□□□□ 0.67
UBA52P62987 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
UBA52P62987 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
UBA52P62987 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
UBA52P62987 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC19.24■□□□□ 0.67
UBA52P62987 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC19.24■□□□□ 0.67
UBA52P62987 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
UBA52P62987 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC19.24■□□□□ 0.67
UBA52P62987 PEMT-206ENST00000435340 960 ntTSL 5 BASIC19.24■□□□□ 0.67
UBA52P62987 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC19.24■□□□□ 0.67
UBA52P62987 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
UBA52P62987 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
UBA52P62987 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC19.24■□□□□ 0.67
UBA52P62987 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
UBA52P62987 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
UBA52P62987 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
UBA52P62987 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
UBA52P62987 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
UBA52P62987 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
UBA52P62987 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC19.23■□□□□ 0.67
UBA52P62987 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
UBA52P62987 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
UBA52P62987 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
UBA52P62987 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 11.3 ms