Protein–RNA interactions for Protein: P50748

KNTC1, Kinetochore-associated protein 1, humanhuman

Predictions only

Length 2,209 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KNTC1P50748 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
KNTC1P50748 PICK1-201ENST00000356976 2055 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
KNTC1P50748 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC21.63■■□□□ 1.05
KNTC1P50748 NME4-202ENST00000382940 766 ntTSL 3 BASIC21.63■■□□□ 1.05
KNTC1P50748 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
KNTC1P50748 GXYLT1P2-201ENST00000433312 1230 ntBASIC21.63■■□□□ 1.05
KNTC1P50748 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC21.63■■□□□ 1.05
KNTC1P50748 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC21.63■■□□□ 1.05
KNTC1P50748 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
KNTC1P50748 NTF6G-201ENST00000591094 616 ntBASIC21.63■■□□□ 1.05
KNTC1P50748 USF2-207ENST00000595068 1612 ntTSL 5 BASIC21.63■■□□□ 1.05
KNTC1P50748 NME4-211ENST00000620944 1193 ntTSL 2 BASIC21.63■■□□□ 1.05
KNTC1P50748 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC21.62■■□□□ 1.05
KNTC1P50748 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
KNTC1P50748 RAB40C-204ENST00000538492 2569 ntAPPRIS P1 TSL 2 BASIC21.62■■□□□ 1.05
KNTC1P50748 ME3-201ENST00000323418 1068 ntTSL 5 BASIC21.62■■□□□ 1.05
KNTC1P50748 ZIC2-201ENST00000376335 2983 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
KNTC1P50748 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC21.62■■□□□ 1.05
KNTC1P50748 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC21.62■■□□□ 1.05
KNTC1P50748 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC21.62■■□□□ 1.05
KNTC1P50748 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC21.61■■□□□ 1.05
KNTC1P50748 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC21.61■■□□□ 1.05
KNTC1P50748 ROM1-201ENST00000278833 1878 ntAPPRIS P2 TSL 1 (best) BASIC21.61■■□□□ 1.05
KNTC1P50748 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC21.61■■□□□ 1.05
KNTC1P50748 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC21.61■■□□□ 1.05
KNTC1P50748 EMC9-206ENST00000560403 872 ntTSL 2 BASIC21.61■■□□□ 1.05
KNTC1P50748 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC21.61■■□□□ 1.05
KNTC1P50748 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
KNTC1P50748 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC21.61■■□□□ 1.05
KNTC1P50748 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC21.61■■□□□ 1.05
KNTC1P50748 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
KNTC1P50748 AC092803.2-201ENST00000564287 1899 ntBASIC21.6■■□□□ 1.05
KNTC1P50748 FAAH-201ENST00000243167 2094 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
KNTC1P50748 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
KNTC1P50748 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
KNTC1P50748 ST6GALNAC6-205ENST00000373146 2460 ntAPPRIS P3 TSL 1 (best) BASIC21.6■■□□□ 1.05
KNTC1P50748 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
KNTC1P50748 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
KNTC1P50748 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
KNTC1P50748 AC016769.1-201ENST00000409132 1010 ntBASIC21.6■■□□□ 1.05
KNTC1P50748 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC21.6■■□□□ 1.05
KNTC1P50748 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
KNTC1P50748 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
KNTC1P50748 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
KNTC1P50748 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
KNTC1P50748 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
KNTC1P50748 AC009086.3-201ENST00000623486 1008 ntBASIC21.59■■□□□ 1.05
KNTC1P50748 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC21.59■■□□□ 1.05
KNTC1P50748 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC21.59■■□□□ 1.05
KNTC1P50748 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
KNTC1P50748 IGHV3-19-201ENST00000521488 291 ntBASIC21.59■■□□□ 1.05
KNTC1P50748 pRNA.6-201ENST00000610482 90 ntBASIC21.59■■□□□ 1.05
KNTC1P50748 pRNA.5-201ENST00000612139 90 ntBASIC21.59■■□□□ 1.05
KNTC1P50748 pRNA.11-201ENST00000618423 90 ntBASIC21.59■■□□□ 1.05
KNTC1P50748 pRNA.13-201ENST00000619112 90 ntBASIC21.59■■□□□ 1.05
KNTC1P50748 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC21.58■■□□□ 1.05
KNTC1P50748 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC21.58■■□□□ 1.05
KNTC1P50748 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
KNTC1P50748 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC21.58■■□□□ 1.05
KNTC1P50748 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC21.58■■□□□ 1.05
KNTC1P50748 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC21.58■■□□□ 1.05
KNTC1P50748 VPS53-216ENST00000574029 585 ntTSL 4 BASIC21.58■■□□□ 1.05
KNTC1P50748 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC21.58■■□□□ 1.05
KNTC1P50748 AL354811.1-201ENST00000610286 706 ntBASIC21.58■■□□□ 1.05
KNTC1P50748 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
KNTC1P50748 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC21.57■■□□□ 1.04
KNTC1P50748 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC21.57■■□□□ 1.04
KNTC1P50748 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
KNTC1P50748 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC21.57■■□□□ 1.04
KNTC1P50748 TMEM9-201ENST00000367330 1959 ntAPPRIS P3 TSL 1 (best) BASIC21.57■■□□□ 1.04
KNTC1P50748 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC21.57■■□□□ 1.04
KNTC1P50748 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC21.57■■□□□ 1.04
KNTC1P50748 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
KNTC1P50748 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC21.57■■□□□ 1.04
KNTC1P50748 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
KNTC1P50748 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
KNTC1P50748 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC21.57■■□□□ 1.04
KNTC1P50748 TMEM202-AS1-202ENST00000565181 2325 ntBASIC21.57■■□□□ 1.04
KNTC1P50748 RAP2CP1-201ENST00000605103 478 ntBASIC21.56■■□□□ 1.04
KNTC1P50748 CEBPA-AS1-201ENST00000592982 2198 ntBASIC21.56■■□□□ 1.04
KNTC1P50748 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC21.56■■□□□ 1.04
KNTC1P50748 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
KNTC1P50748 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC21.56■■□□□ 1.04
KNTC1P50748 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC21.56■■□□□ 1.04
KNTC1P50748 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
KNTC1P50748 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
KNTC1P50748 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC21.55■■□□□ 1.04
KNTC1P50748 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC21.55■■□□□ 1.04
KNTC1P50748 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC21.55■■□□□ 1.04
KNTC1P50748 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
KNTC1P50748 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC21.55■■□□□ 1.04
KNTC1P50748 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
KNTC1P50748 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
KNTC1P50748 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
KNTC1P50748 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC21.55■■□□□ 1.04
KNTC1P50748 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
KNTC1P50748 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
KNTC1P50748 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC21.54■■□□□ 1.04
KNTC1P50748 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
KNTC1P50748 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC21.54■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 16.6 ms