Protein–RNA interactions for Protein: P49458

SRP9, Signal recognition particle 9 kDa protein, humanhuman

Known RBP Predictions only

Length 86 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRP9P49458 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC19.92■□□□□ 0.78
SRP9P49458 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
SRP9P49458 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
SRP9P49458 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC19.92■□□□□ 0.78
SRP9P49458 AC011551.1-201ENST00000614101 683 ntBASIC19.92■□□□□ 0.78
SRP9P49458 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC19.92■□□□□ 0.78
SRP9P49458 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC19.92■□□□□ 0.78
SRP9P49458 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
SRP9P49458 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
SRP9P49458 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC19.92■□□□□ 0.78
SRP9P49458 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC19.92■□□□□ 0.78
SRP9P49458 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
SRP9P49458 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC19.92■□□□□ 0.78
SRP9P49458 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC19.92■□□□□ 0.78
SRP9P49458 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC19.92■□□□□ 0.78
SRP9P49458 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
SRP9P49458 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
SRP9P49458 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC19.91■□□□□ 0.78
SRP9P49458 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
SRP9P49458 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
SRP9P49458 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
SRP9P49458 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC19.91■□□□□ 0.78
SRP9P49458 THA1P-201ENST00000590384 1145 ntBASIC19.91■□□□□ 0.78
SRP9P49458 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC19.91■□□□□ 0.78
SRP9P49458 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC19.91■□□□□ 0.78
SRP9P49458 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
SRP9P49458 KRT18P24-201ENST00000344739 1156 ntBASIC19.9■□□□□ 0.78
SRP9P49458 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC19.9■□□□□ 0.78
SRP9P49458 RARRES2P1-201ENST00000474487 481 ntBASIC19.9■□□□□ 0.78
SRP9P49458 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
SRP9P49458 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
SRP9P49458 HLA-L-211ENST00000482052 1765 ntBASIC19.9■□□□□ 0.78
SRP9P49458 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
SRP9P49458 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
SRP9P49458 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
SRP9P49458 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC19.89■□□□□ 0.77
SRP9P49458 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
SRP9P49458 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
SRP9P49458 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC19.89■□□□□ 0.77
SRP9P49458 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC19.89■□□□□ 0.77
SRP9P49458 MIR6089-201ENST00000616698 64 ntBASIC19.89■□□□□ 0.77
SRP9P49458 C1orf229-201ENST00000623686 2258 ntBASIC19.89■□□□□ 0.77
SRP9P49458 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
SRP9P49458 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
SRP9P49458 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
SRP9P49458 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
SRP9P49458 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
SRP9P49458 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
SRP9P49458 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
SRP9P49458 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
SRP9P49458 AC103724.3-201ENST00000564481 992 ntBASIC19.88■□□□□ 0.77
SRP9P49458 AL031848.2-201ENST00000607670 837 ntBASIC19.88■□□□□ 0.77
SRP9P49458 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
SRP9P49458 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
SRP9P49458 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC19.88■□□□□ 0.77
SRP9P49458 AC090877.2-201ENST00000558441 1738 ntBASIC19.88■□□□□ 0.77
SRP9P49458 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC19.87■□□□□ 0.77
SRP9P49458 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
SRP9P49458 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC19.87■□□□□ 0.77
SRP9P49458 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
SRP9P49458 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC19.87■□□□□ 0.77
SRP9P49458 AC120024.1-201ENST00000562672 995 ntBASIC19.87■□□□□ 0.77
SRP9P49458 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
SRP9P49458 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC19.87■□□□□ 0.77
SRP9P49458 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
SRP9P49458 AC007375.3-201ENST00000600936 2314 ntBASIC19.87■□□□□ 0.77
SRP9P49458 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
SRP9P49458 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
SRP9P49458 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC19.86■□□□□ 0.77
SRP9P49458 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
SRP9P49458 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
SRP9P49458 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
SRP9P49458 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
SRP9P49458 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC19.86■□□□□ 0.77
SRP9P49458 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
SRP9P49458 LINC00526-201ENST00000581067 1875 ntBASIC19.86■□□□□ 0.77
SRP9P49458 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
SRP9P49458 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
SRP9P49458 WWC2-AS2-201ENST00000578387 2183 ntBASIC19.85■□□□□ 0.77
SRP9P49458 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
SRP9P49458 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC19.85■□□□□ 0.77
SRP9P49458 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
SRP9P49458 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
SRP9P49458 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
SRP9P49458 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
SRP9P49458 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC19.85■□□□□ 0.77
SRP9P49458 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC19.85■□□□□ 0.77
SRP9P49458 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
SRP9P49458 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
SRP9P49458 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
SRP9P49458 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC19.85■□□□□ 0.77
SRP9P49458 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC19.85■□□□□ 0.77
SRP9P49458 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
SRP9P49458 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC19.85■□□□□ 0.77
SRP9P49458 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
SRP9P49458 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
SRP9P49458 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
SRP9P49458 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC19.84■□□□□ 0.77
SRP9P49458 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
SRP9P49458 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 16.9 ms