Protein–RNA interactions for Protein: P40198

CEACAM3, Carcinoembryonic antigen-related cell adhesion molecule 3, humanhuman

Predictions only

Length 252 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CEACAM3P40198 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CEACAM3P40198 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
CEACAM3P40198 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CEACAM3P40198 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC18.36■□□□□ 0.53
CEACAM3P40198 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
CEACAM3P40198 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC18.36■□□□□ 0.53
CEACAM3P40198 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CEACAM3P40198 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC18.35■□□□□ 0.53
CEACAM3P40198 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CEACAM3P40198 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CEACAM3P40198 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CEACAM3P40198 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC18.35■□□□□ 0.53
CEACAM3P40198 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC18.35■□□□□ 0.53
CEACAM3P40198 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC18.35■□□□□ 0.53
CEACAM3P40198 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
CEACAM3P40198 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CEACAM3P40198 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CEACAM3P40198 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CEACAM3P40198 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC18.35■□□□□ 0.53
CEACAM3P40198 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
CEACAM3P40198 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CEACAM3P40198 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CEACAM3P40198 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
CEACAM3P40198 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
CEACAM3P40198 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CEACAM3P40198 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CEACAM3P40198 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CEACAM3P40198 USF2-207ENST00000595068 1612 ntTSL 5 BASIC18.34■□□□□ 0.53
CEACAM3P40198 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CEACAM3P40198 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CEACAM3P40198 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC18.34■□□□□ 0.53
CEACAM3P40198 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC18.34■□□□□ 0.53
CEACAM3P40198 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CEACAM3P40198 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CEACAM3P40198 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CEACAM3P40198 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC18.33■□□□□ 0.53
CEACAM3P40198 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.53
CEACAM3P40198 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
CEACAM3P40198 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.53
CEACAM3P40198 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC18.33■□□□□ 0.53
CEACAM3P40198 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC18.33■□□□□ 0.52
CEACAM3P40198 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
CEACAM3P40198 AL117332.1-201ENST00000622628 974 ntBASIC18.33■□□□□ 0.52
CEACAM3P40198 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC18.33■□□□□ 0.52
CEACAM3P40198 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CEACAM3P40198 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC18.33■□□□□ 0.52
CEACAM3P40198 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CEACAM3P40198 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CEACAM3P40198 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
CEACAM3P40198 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
CEACAM3P40198 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
CEACAM3P40198 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC18.32■□□□□ 0.52
CEACAM3P40198 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CEACAM3P40198 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CEACAM3P40198 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CEACAM3P40198 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
CEACAM3P40198 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC18.32■□□□□ 0.52
CEACAM3P40198 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC18.32■□□□□ 0.52
CEACAM3P40198 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC18.32■□□□□ 0.52
CEACAM3P40198 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC18.32■□□□□ 0.52
CEACAM3P40198 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CEACAM3P40198 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC18.32■□□□□ 0.52
CEACAM3P40198 MIR3621-201ENST00000580529 85 ntBASIC18.32■□□□□ 0.52
CEACAM3P40198 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CEACAM3P40198 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
CEACAM3P40198 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC18.32■□□□□ 0.52
CEACAM3P40198 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
CEACAM3P40198 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
CEACAM3P40198 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC18.31■□□□□ 0.52
CEACAM3P40198 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CEACAM3P40198 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CEACAM3P40198 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CEACAM3P40198 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC18.31■□□□□ 0.52
CEACAM3P40198 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC18.31■□□□□ 0.52
CEACAM3P40198 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CEACAM3P40198 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC18.31■□□□□ 0.52
CEACAM3P40198 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CEACAM3P40198 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CEACAM3P40198 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
CEACAM3P40198 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
CEACAM3P40198 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
CEACAM3P40198 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CEACAM3P40198 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CEACAM3P40198 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CEACAM3P40198 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC18.3■□□□□ 0.52
CEACAM3P40198 AC131212.1-201ENST00000613771 668 ntBASIC18.3■□□□□ 0.52
CEACAM3P40198 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC18.3■□□□□ 0.52
CEACAM3P40198 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CEACAM3P40198 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC18.3■□□□□ 0.52
CEACAM3P40198 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CEACAM3P40198 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CEACAM3P40198 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CEACAM3P40198 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC18.3■□□□□ 0.52
CEACAM3P40198 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
CEACAM3P40198 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
CEACAM3P40198 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC18.29■□□□□ 0.52
CEACAM3P40198 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC18.29■□□□□ 0.52
CEACAM3P40198 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
CEACAM3P40198 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CEACAM3P40198 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 23.5 ms