Protein–RNA interactions for Protein: P28702

RXRB, Retinoic acid receptor RXR-beta, humanhuman

Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RXRBP28702 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC30.33■■■□□ 2.45
RXRBP28702 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC30.32■■■□□ 2.44
RXRBP28702 COX20-201ENST00000366528 568 ntTSL 2 BASIC30.32■■■□□ 2.44
RXRBP28702 HOMER2-202ENST00000450735 1950 ntAPPRIS ALT2 TSL 1 (best) BASIC30.32■■■□□ 2.44
RXRBP28702 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC30.31■■■□□ 2.44
RXRBP28702 AC083906.2-201ENST00000511578 360 ntBASIC30.31■■■□□ 2.44
RXRBP28702 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC30.31■■■□□ 2.44
RXRBP28702 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC30.31■■■□□ 2.44
RXRBP28702 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC30.31■■■□□ 2.44
RXRBP28702 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC30.31■■■□□ 2.44
RXRBP28702 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC30.31■■■□□ 2.44
RXRBP28702 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC30.3■■■□□ 2.44
RXRBP28702 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC30.3■■■□□ 2.44
RXRBP28702 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC30.3■■■□□ 2.44
RXRBP28702 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC30.3■■■□□ 2.44
RXRBP28702 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC30.3■■■□□ 2.44
RXRBP28702 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC30.3■■■□□ 2.44
RXRBP28702 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC30.3■■■□□ 2.44
RXRBP28702 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC30.3■■■□□ 2.44
RXRBP28702 AC091060.1-201ENST00000623524 1766 ntBASIC30.3■■■□□ 2.44
RXRBP28702 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC30.29■■■□□ 2.44
RXRBP28702 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC30.29■■■□□ 2.44
RXRBP28702 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC30.29■■■□□ 2.44
RXRBP28702 AC069152.1-201ENST00000438030 544 ntBASIC30.29■■■□□ 2.44
RXRBP28702 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC30.29■■■□□ 2.44
RXRBP28702 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC30.29■■■□□ 2.44
RXRBP28702 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC30.29■■■□□ 2.44
RXRBP28702 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC30.29■■■□□ 2.44
RXRBP28702 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC30.29■■■□□ 2.44
RXRBP28702 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC30.28■■■□□ 2.44
RXRBP28702 STK32C-205ENST00000456004 607 ntTSL 2 BASIC30.28■■■□□ 2.44
RXRBP28702 RGMA-211ENST00000557420 989 ntTSL 3 BASIC30.28■■■□□ 2.44
RXRBP28702 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC30.28■■■□□ 2.44
RXRBP28702 TPRG1LP1-201ENST00000598702 760 ntBASIC30.28■■■□□ 2.44
RXRBP28702 TBCB-214ENST00000629269 413 ntTSL 5 BASIC30.28■■■□□ 2.44
RXRBP28702 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC30.28■■■□□ 2.44
RXRBP28702 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC30.28■■■□□ 2.44
RXRBP28702 AC004854.2-201ENST00000608450 1441 ntBASIC30.28■■■□□ 2.44
RXRBP28702 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC30.27■■■□□ 2.44
RXRBP28702 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC30.27■■■□□ 2.44
RXRBP28702 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC30.27■■■□□ 2.44
RXRBP28702 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC30.27■■■□□ 2.44
RXRBP28702 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC30.27■■■□□ 2.44
RXRBP28702 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC30.27■■■□□ 2.44
RXRBP28702 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC30.27■■■□□ 2.44
RXRBP28702 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC30.26■■■□□ 2.44
RXRBP28702 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC30.26■■■□□ 2.44
RXRBP28702 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC30.26■■■□□ 2.44
RXRBP28702 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC30.26■■■□□ 2.44
RXRBP28702 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC30.26■■■□□ 2.44
RXRBP28702 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC30.26■■■□□ 2.43
RXRBP28702 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC30.26■■■□□ 2.43
RXRBP28702 ITM2C-210ENST00000620962 501 ntBASIC30.26■■■□□ 2.43
RXRBP28702 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC30.25■■■□□ 2.43
RXRBP28702 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC30.25■■■□□ 2.43
RXRBP28702 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC30.25■■■□□ 2.43
RXRBP28702 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC30.25■■■□□ 2.43
RXRBP28702 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC30.25■■■□□ 2.43
RXRBP28702 AL138781.1-201ENST00000566567 1274 ntBASIC30.25■■■□□ 2.43
RXRBP28702 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC30.25■■■□□ 2.43
RXRBP28702 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC30.24■■■□□ 2.43
RXRBP28702 PHF23-201ENST00000320316 2037 ntAPPRIS P1 TSL 1 (best) BASIC30.24■■■□□ 2.43
RXRBP28702 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC30.24■■■□□ 2.43
RXRBP28702 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC30.24■■■□□ 2.43
RXRBP28702 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC30.24■■■□□ 2.43
RXRBP28702 IFNGR2-201ENST00000290219 2221 ntAPPRIS P3 TSL 1 (best) BASIC30.24■■■□□ 2.43
RXRBP28702 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC30.23■■■□□ 2.43
RXRBP28702 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC30.23■■■□□ 2.43
RXRBP28702 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC30.23■■■□□ 2.43
RXRBP28702 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC30.23■■■□□ 2.43
RXRBP28702 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC30.23■■■□□ 2.43
RXRBP28702 KRT18P29-201ENST00000397031 1267 ntBASIC30.23■■■□□ 2.43
RXRBP28702 DUX4L4-201ENST00000566884 1269 ntBASIC30.23■■■□□ 2.43
RXRBP28702 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC30.23■■■□□ 2.43
RXRBP28702 AC105233.4-201ENST00000642045 216 ntBASIC30.23■■■□□ 2.43
RXRBP28702 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC30.23■■■□□ 2.43
RXRBP28702 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC30.22■■■□□ 2.43
RXRBP28702 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC30.22■■■□□ 2.43
RXRBP28702 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC30.22■■■□□ 2.43
RXRBP28702 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC30.22■■■□□ 2.43
RXRBP28702 KRT19P1-201ENST00000405746 1186 ntBASIC30.22■■■□□ 2.43
RXRBP28702 POU5F1P3-201ENST00000428824 1078 ntBASIC30.22■■■□□ 2.43
RXRBP28702 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC30.22■■■□□ 2.43
RXRBP28702 GUSBP6-202ENST00000438529 1198 ntBASIC30.22■■■□□ 2.43
RXRBP28702 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC30.22■■■□□ 2.43
RXRBP28702 AL050303.2-201ENST00000619798 666 ntBASIC30.22■■■□□ 2.43
RXRBP28702 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC30.22■■■□□ 2.43
RXRBP28702 LINC01003-201ENST00000564834 1764 ntBASIC30.21■■■□□ 2.43
RXRBP28702 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC30.21■■■□□ 2.43
RXRBP28702 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC30.21■■■□□ 2.43
RXRBP28702 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC30.21■■■□□ 2.43
RXRBP28702 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC30.21■■■□□ 2.43
RXRBP28702 KRT18P11-201ENST00000435214 1283 ntBASIC30.21■■■□□ 2.43
RXRBP28702 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC30.21■■■□□ 2.43
RXRBP28702 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC30.21■■■□□ 2.43
RXRBP28702 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC30.2■■■□□ 2.43
RXRBP28702 AC008105.3-203ENST00000591365 2238 ntTSL 2 BASIC30.2■■■□□ 2.43
RXRBP28702 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC30.2■■■□□ 2.43
RXRBP28702 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC30.2■■■□□ 2.43
RXRBP28702 TFG-210ENST00000620299 1289 ntTSL 5 BASIC30.2■■■□□ 2.43
Retrieved 100 of 98,524 protein–RNA pairs in 16.8 ms