Protein–RNA interactions for Protein: P22001

KCNA3, Potassium voltage-gated channel subfamily A member 3, humanhuman

Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNA3P22001 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC28.17■■■□□ 2.1
KCNA3P22001 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC28.17■■■□□ 2.1
KCNA3P22001 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC28.17■■■□□ 2.1
KCNA3P22001 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC28.17■■■□□ 2.1
KCNA3P22001 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC28.17■■■□□ 2.1
KCNA3P22001 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC28.17■■■□□ 2.1
KCNA3P22001 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC28.17■■■□□ 2.1
KCNA3P22001 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC28.16■■■□□ 2.1
KCNA3P22001 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC28.16■■■□□ 2.1
KCNA3P22001 PSMG1-201ENST00000331573 2154 ntAPPRIS P1 TSL 1 (best) BASIC28.16■■■□□ 2.1
KCNA3P22001 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC28.16■■■□□ 2.1
KCNA3P22001 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC28.16■■■□□ 2.1
KCNA3P22001 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC28.16■■■□□ 2.1
KCNA3P22001 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC28.16■■■□□ 2.1
KCNA3P22001 HOXD13-201ENST00000392539 2240 ntAPPRIS P1 TSL 1 (best) BASIC28.16■■■□□ 2.1
KCNA3P22001 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC28.15■■■□□ 2.1
KCNA3P22001 AC073111.5-205ENST00000641717 521 ntBASIC28.15■■■□□ 2.1
KCNA3P22001 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC28.15■■■□□ 2.1
KCNA3P22001 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC28.15■■■□□ 2.1
KCNA3P22001 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC28.14■■■□□ 2.1
KCNA3P22001 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC28.14■■■□□ 2.1
KCNA3P22001 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC28.14■■■□□ 2.1
KCNA3P22001 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC28.14■■■□□ 2.1
KCNA3P22001 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC28.14■■■□□ 2.1
KCNA3P22001 MAP2K4P1-201ENST00000438453 1195 ntBASIC28.14■■■□□ 2.1
KCNA3P22001 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC28.14■■■□□ 2.1
KCNA3P22001 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC28.14■■■□□ 2.1
KCNA3P22001 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC28.14■■■□□ 2.1
KCNA3P22001 AC104771.1-201ENST00000603335 964 ntBASIC28.14■■■□□ 2.1
KCNA3P22001 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC28.14■■■□□ 2.1
KCNA3P22001 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC28.14■■■□□ 2.1
KCNA3P22001 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC28.14■■■□□ 2.09
KCNA3P22001 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC28.14■■■□□ 2.09
KCNA3P22001 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC28.13■■■□□ 2.09
KCNA3P22001 HDGFL1-201ENST00000510882 2174 ntAPPRIS P1 BASIC28.13■■■□□ 2.09
KCNA3P22001 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC28.13■■■□□ 2.09
KCNA3P22001 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC28.13■■■□□ 2.09
KCNA3P22001 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC28.13■■■□□ 2.09
KCNA3P22001 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC28.13■■■□□ 2.09
KCNA3P22001 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC28.13■■■□□ 2.09
KCNA3P22001 PLEKHF1-201ENST00000436066 2084 ntAPPRIS P1 TSL 1 (best) BASIC28.12■■■□□ 2.09
KCNA3P22001 TESK1-206ENST00000620767 2438 ntAPPRIS P1 TSL 5 BASIC28.12■■■□□ 2.09
KCNA3P22001 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC28.12■■■□□ 2.09
KCNA3P22001 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC28.12■■■□□ 2.09
KCNA3P22001 USF2-207ENST00000595068 1612 ntTSL 5 BASIC28.12■■■□□ 2.09
KCNA3P22001 NDEL1-202ENST00000380025 2181 ntTSL 5 BASIC28.12■■■□□ 2.09
KCNA3P22001 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC28.12■■■□□ 2.09
KCNA3P22001 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC28.12■■■□□ 2.09
KCNA3P22001 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC28.12■■■□□ 2.09
KCNA3P22001 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC28.12■■■□□ 2.09
KCNA3P22001 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC28.12■■■□□ 2.09
KCNA3P22001 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC28.12■■■□□ 2.09
KCNA3P22001 SLC25A6-201ENST00000381401 2062 ntAPPRIS P1 TSL 1 (best) BASIC28.12■■■□□ 2.09
KCNA3P22001 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC28.12■■■□□ 2.09
KCNA3P22001 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC28.12■■■□□ 2.09
KCNA3P22001 RRAGC-201ENST00000373001 2732 ntAPPRIS P1 TSL 1 (best) BASIC28.11■■■□□ 2.09
KCNA3P22001 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC28.11■■■□□ 2.09
KCNA3P22001 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC28.11■■■□□ 2.09
KCNA3P22001 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC28.11■■■□□ 2.09
KCNA3P22001 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC28.11■■■□□ 2.09
KCNA3P22001 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC28.11■■■□□ 2.09
KCNA3P22001 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC28.11■■■□□ 2.09
KCNA3P22001 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC28.11■■■□□ 2.09
KCNA3P22001 PQLC1-203ENST00000397778 2555 ntAPPRIS P3 TSL 1 (best) BASIC28.1■■■□□ 2.09
KCNA3P22001 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC28.1■■■□□ 2.09
KCNA3P22001 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC28.1■■■□□ 2.09
KCNA3P22001 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC28.1■■■□□ 2.09
KCNA3P22001 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC28.1■■■□□ 2.09
KCNA3P22001 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC28.09■■■□□ 2.09
KCNA3P22001 AC141586.4-201ENST00000624558 1573 ntBASIC28.09■■■□□ 2.09
KCNA3P22001 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC28.09■■■□□ 2.09
KCNA3P22001 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC28.09■■■□□ 2.09
KCNA3P22001 PPP1R14BP3-201ENST00000509033 445 ntBASIC28.09■■■□□ 2.09
KCNA3P22001 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC28.09■■■□□ 2.09
KCNA3P22001 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC28.09■■■□□ 2.09
KCNA3P22001 TMEM55B-201ENST00000250489 1961 ntAPPRIS P3 TSL 1 (best) BASIC28.09■■■□□ 2.09
KCNA3P22001 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC28.09■■■□□ 2.09
KCNA3P22001 SLC6A10P-202ENST00000431994 2058 ntBASIC28.09■■■□□ 2.09
KCNA3P22001 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC28.09■■■□□ 2.09
KCNA3P22001 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC28.08■■■□□ 2.09
KCNA3P22001 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC28.08■■■□□ 2.09
KCNA3P22001 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC28.07■■■□□ 2.08
KCNA3P22001 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC28.07■■■□□ 2.08
KCNA3P22001 NT5C3AP1-201ENST00000394500 1012 ntBASIC28.07■■■□□ 2.08
KCNA3P22001 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC28.07■■■□□ 2.08
KCNA3P22001 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC28.07■■■□□ 2.08
KCNA3P22001 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC28.07■■■□□ 2.08
KCNA3P22001 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC28.07■■■□□ 2.08
KCNA3P22001 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC28.06■■■□□ 2.08
KCNA3P22001 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC28.06■■■□□ 2.08
KCNA3P22001 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC28.06■■■□□ 2.08
KCNA3P22001 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC28.06■■■□□ 2.08
KCNA3P22001 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC28.06■■■□□ 2.08
KCNA3P22001 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC28.06■■■□□ 2.08
KCNA3P22001 AC010525.1-201ENST00000585559 441 ntBASIC28.06■■■□□ 2.08
KCNA3P22001 TMEM191A-211ENST00000637163 1067 ntBASIC28.06■■■□□ 2.08
KCNA3P22001 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC28.06■■■□□ 2.08
KCNA3P22001 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC28.06■■■□□ 2.08
KCNA3P22001 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC28.06■■■□□ 2.08
KCNA3P22001 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC28.05■■■□□ 2.08
Retrieved 100 of 98,524 protein–RNA pairs in 17.4 ms