Protein–RNA interactions for Protein: P18846

ATF1, Cyclic AMP-dependent transcription factor ATF-1, humanhuman

Predictions only

Length 271 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATF1P18846 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC19.81■□□□□ 0.76
ATF1P18846 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
ATF1P18846 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
ATF1P18846 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
ATF1P18846 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
ATF1P18846 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
ATF1P18846 LONRF2P2-201ENST00000439212 571 ntBASIC19.8■□□□□ 0.76
ATF1P18846 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC19.8■□□□□ 0.76
ATF1P18846 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
ATF1P18846 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
ATF1P18846 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
ATF1P18846 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC19.8■□□□□ 0.76
ATF1P18846 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
ATF1P18846 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
ATF1P18846 USP48-205ENST00000421625 2818 ntTSL 2 BASIC19.8■□□□□ 0.76
ATF1P18846 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
ATF1P18846 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC19.79■□□□□ 0.76
ATF1P18846 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
ATF1P18846 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
ATF1P18846 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
ATF1P18846 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
ATF1P18846 PSMG4-207ENST00000451246 824 ntTSL 3 BASIC19.79■□□□□ 0.76
ATF1P18846 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
ATF1P18846 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
ATF1P18846 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
ATF1P18846 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
ATF1P18846 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
ATF1P18846 AL161729.1-201ENST00000604104 1402 ntBASIC19.78■□□□□ 0.76
ATF1P18846 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC19.78■□□□□ 0.76
ATF1P18846 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
ATF1P18846 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC19.78■□□□□ 0.76
ATF1P18846 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
ATF1P18846 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
ATF1P18846 AC007375.3-201ENST00000600936 2314 ntBASIC19.78■□□□□ 0.76
ATF1P18846 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
ATF1P18846 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
ATF1P18846 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
ATF1P18846 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
ATF1P18846 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
ATF1P18846 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC19.78■□□□□ 0.76
ATF1P18846 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
ATF1P18846 H19-210ENST00000439725 1929 ntTSL 2 BASIC19.78■□□□□ 0.76
ATF1P18846 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
ATF1P18846 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
ATF1P18846 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC19.77■□□□□ 0.76
ATF1P18846 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
ATF1P18846 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
ATF1P18846 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
ATF1P18846 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
ATF1P18846 IFI30-201ENST00000407280 1134 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
ATF1P18846 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
ATF1P18846 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC19.77■□□□□ 0.76
ATF1P18846 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC19.77■□□□□ 0.76
ATF1P18846 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC19.77■□□□□ 0.76
ATF1P18846 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
ATF1P18846 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC19.77■□□□□ 0.75
ATF1P18846 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
ATF1P18846 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC19.76■□□□□ 0.75
ATF1P18846 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
ATF1P18846 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
ATF1P18846 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
ATF1P18846 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
ATF1P18846 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
ATF1P18846 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
ATF1P18846 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
ATF1P18846 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
ATF1P18846 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
ATF1P18846 KRT18P60-201ENST00000312876 1297 ntBASIC19.76■□□□□ 0.75
ATF1P18846 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
ATF1P18846 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
ATF1P18846 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
ATF1P18846 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
ATF1P18846 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
ATF1P18846 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
ATF1P18846 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC19.76■□□□□ 0.75
ATF1P18846 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
ATF1P18846 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC19.76■□□□□ 0.75
ATF1P18846 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC19.75■□□□□ 0.75
ATF1P18846 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC19.75■□□□□ 0.75
ATF1P18846 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
ATF1P18846 CD37-213ENST00000598095 1598 ntTSL 2 BASIC19.75■□□□□ 0.75
ATF1P18846 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
ATF1P18846 HYI-210ENST00000486909 905 ntTSL 5 BASIC19.75■□□□□ 0.75
ATF1P18846 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC19.75■□□□□ 0.75
ATF1P18846 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
ATF1P18846 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
ATF1P18846 COMT-203ENST00000403184 2217 ntTSL 2 BASIC19.75■□□□□ 0.75
ATF1P18846 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC19.75■□□□□ 0.75
ATF1P18846 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
ATF1P18846 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC19.74■□□□□ 0.75
ATF1P18846 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
ATF1P18846 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC19.74■□□□□ 0.75
ATF1P18846 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
ATF1P18846 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
ATF1P18846 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
ATF1P18846 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
ATF1P18846 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC19.74■□□□□ 0.75
ATF1P18846 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC19.74■□□□□ 0.75
ATF1P18846 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC19.73■□□□□ 0.75
ATF1P18846 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 17.9 ms