Protein–RNA interactions for Protein: P12694

BCKDHA, 2-oxoisovalerate dehydrogenase subunit alpha, mitochondrial, humanhuman

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BCKDHAP12694 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
BCKDHAP12694 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
BCKDHAP12694 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC21.6■■□□□ 1.05
BCKDHAP12694 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
BCKDHAP12694 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC21.6■■□□□ 1.05
BCKDHAP12694 MIR4508-201ENST00000584178 70 ntBASIC21.6■■□□□ 1.05
BCKDHAP12694 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC21.6■■□□□ 1.05
BCKDHAP12694 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC21.6■■□□□ 1.05
BCKDHAP12694 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC21.6■■□□□ 1.05
BCKDHAP12694 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
BCKDHAP12694 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
BCKDHAP12694 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
BCKDHAP12694 C1orf229-201ENST00000623686 2258 ntBASIC21.59■■□□□ 1.05
BCKDHAP12694 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
BCKDHAP12694 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
BCKDHAP12694 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC21.59■■□□□ 1.05
BCKDHAP12694 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC21.59■■□□□ 1.05
BCKDHAP12694 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC21.59■■□□□ 1.05
BCKDHAP12694 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
BCKDHAP12694 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
BCKDHAP12694 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC21.59■■□□□ 1.05
BCKDHAP12694 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC21.59■■□□□ 1.05
BCKDHAP12694 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
BCKDHAP12694 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC21.58■■□□□ 1.05
BCKDHAP12694 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC21.58■■□□□ 1.05
BCKDHAP12694 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
BCKDHAP12694 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC21.58■■□□□ 1.05
BCKDHAP12694 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC21.58■■□□□ 1.05
BCKDHAP12694 AL033527.3-201ENST00000566366 1196 ntBASIC21.58■■□□□ 1.05
BCKDHAP12694 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC21.58■■□□□ 1.05
BCKDHAP12694 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC21.58■■□□□ 1.04
BCKDHAP12694 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
BCKDHAP12694 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
BCKDHAP12694 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC21.57■■□□□ 1.04
BCKDHAP12694 AC233723.2-201ENST00000623798 2106 ntBASIC21.57■■□□□ 1.04
BCKDHAP12694 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC21.57■■□□□ 1.04
BCKDHAP12694 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC21.57■■□□□ 1.04
BCKDHAP12694 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
BCKDHAP12694 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC21.57■■□□□ 1.04
BCKDHAP12694 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
BCKDHAP12694 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
BCKDHAP12694 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC21.56■■□□□ 1.04
BCKDHAP12694 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC21.56■■□□□ 1.04
BCKDHAP12694 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
BCKDHAP12694 AC103834.1-201ENST00000520383 144 ntBASIC21.56■■□□□ 1.04
BCKDHAP12694 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC21.56■■□□□ 1.04
BCKDHAP12694 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
BCKDHAP12694 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
BCKDHAP12694 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC21.56■■□□□ 1.04
BCKDHAP12694 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC21.56■■□□□ 1.04
BCKDHAP12694 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC21.56■■□□□ 1.04
BCKDHAP12694 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC21.56■■□□□ 1.04
BCKDHAP12694 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC21.55■■□□□ 1.04
BCKDHAP12694 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC21.55■■□□□ 1.04
BCKDHAP12694 AL117328.2-201ENST00000624617 1940 ntBASIC21.55■■□□□ 1.04
BCKDHAP12694 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC21.55■■□□□ 1.04
BCKDHAP12694 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC21.55■■□□□ 1.04
BCKDHAP12694 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
BCKDHAP12694 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
BCKDHAP12694 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
BCKDHAP12694 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC21.54■■□□□ 1.04
BCKDHAP12694 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC21.54■■□□□ 1.04
BCKDHAP12694 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
BCKDHAP12694 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
BCKDHAP12694 AC079630.1-202ENST00000618127 1840 ntBASIC21.53■■□□□ 1.04
BCKDHAP12694 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
BCKDHAP12694 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC21.53■■□□□ 1.04
BCKDHAP12694 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
BCKDHAP12694 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
BCKDHAP12694 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
BCKDHAP12694 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
BCKDHAP12694 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
BCKDHAP12694 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
BCKDHAP12694 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC21.52■■□□□ 1.04
BCKDHAP12694 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
BCKDHAP12694 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
BCKDHAP12694 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
BCKDHAP12694 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
BCKDHAP12694 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC21.52■■□□□ 1.04
BCKDHAP12694 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC21.52■■□□□ 1.04
BCKDHAP12694 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.04
BCKDHAP12694 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC21.52■■□□□ 1.04
BCKDHAP12694 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
BCKDHAP12694 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC21.52■■□□□ 1.04
BCKDHAP12694 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
BCKDHAP12694 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
BCKDHAP12694 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
BCKDHAP12694 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
BCKDHAP12694 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
BCKDHAP12694 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC21.51■■□□□ 1.03
BCKDHAP12694 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
BCKDHAP12694 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC21.51■■□□□ 1.03
BCKDHAP12694 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC21.51■■□□□ 1.03
BCKDHAP12694 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
BCKDHAP12694 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC21.51■■□□□ 1.03
BCKDHAP12694 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
BCKDHAP12694 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
BCKDHAP12694 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
BCKDHAP12694 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC21.5■■□□□ 1.03
BCKDHAP12694 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 58.2 ms