Protein–RNA interactions for Protein: P04085

PDGFA, Platelet-derived growth factor subunit A, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFAP04085 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC21.04■□□□□ 0.96
PDGFAP04085 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
PDGFAP04085 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC21.03■□□□□ 0.96
PDGFAP04085 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC21.03■□□□□ 0.96
PDGFAP04085 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC21.03■□□□□ 0.96
PDGFAP04085 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
PDGFAP04085 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC21.03■□□□□ 0.96
PDGFAP04085 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
PDGFAP04085 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
PDGFAP04085 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
PDGFAP04085 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC21.02■□□□□ 0.96
PDGFAP04085 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC21.02■□□□□ 0.96
PDGFAP04085 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
PDGFAP04085 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
PDGFAP04085 AC006455.2-201ENST00000429931 906 ntBASIC21.02■□□□□ 0.96
PDGFAP04085 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC21.02■□□□□ 0.96
PDGFAP04085 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
PDGFAP04085 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
PDGFAP04085 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC21.02■□□□□ 0.96
PDGFAP04085 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC21.02■□□□□ 0.96
PDGFAP04085 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
PDGFAP04085 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
PDGFAP04085 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
PDGFAP04085 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
PDGFAP04085 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
PDGFAP04085 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
PDGFAP04085 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
PDGFAP04085 DYRK2-203ENST00000393555 2209 ntAPPRIS ALT1 TSL 1 (best) BASIC21.01■□□□□ 0.95
PDGFAP04085 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
PDGFAP04085 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC21.01■□□□□ 0.95
PDGFAP04085 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC21.01■□□□□ 0.95
PDGFAP04085 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC21.01■□□□□ 0.95
PDGFAP04085 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC21.01■□□□□ 0.95
PDGFAP04085 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
PDGFAP04085 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC21.01■□□□□ 0.95
PDGFAP04085 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC21.01■□□□□ 0.95
PDGFAP04085 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
PDGFAP04085 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
PDGFAP04085 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
PDGFAP04085 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
PDGFAP04085 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
PDGFAP04085 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC21■□□□□ 0.95
PDGFAP04085 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC21■□□□□ 0.95
PDGFAP04085 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC21■□□□□ 0.95
PDGFAP04085 HES6-206ENST00000409574 738 ntTSL 2 BASIC21■□□□□ 0.95
PDGFAP04085 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC21■□□□□ 0.95
PDGFAP04085 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC21■□□□□ 0.95
PDGFAP04085 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
PDGFAP04085 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
PDGFAP04085 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
PDGFAP04085 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC21■□□□□ 0.95
PDGFAP04085 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC21■□□□□ 0.95
PDGFAP04085 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
PDGFAP04085 C17orf82-201ENST00000623772 1530 ntBASIC20.99■□□□□ 0.95
PDGFAP04085 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC20.99■□□□□ 0.95
PDGFAP04085 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC20.99■□□□□ 0.95
PDGFAP04085 STK32C-205ENST00000456004 607 ntTSL 2 BASIC20.99■□□□□ 0.95
PDGFAP04085 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC20.99■□□□□ 0.95
PDGFAP04085 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC20.99■□□□□ 0.95
PDGFAP04085 AC136469.2-201ENST00000623944 1028 ntBASIC20.99■□□□□ 0.95
PDGFAP04085 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
PDGFAP04085 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
PDGFAP04085 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
PDGFAP04085 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
PDGFAP04085 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
PDGFAP04085 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
PDGFAP04085 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
PDGFAP04085 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC20.98■□□□□ 0.95
PDGFAP04085 SP2-202ENST00000613139 908 ntTSL 5 BASIC20.98■□□□□ 0.95
PDGFAP04085 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
PDGFAP04085 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC20.98■□□□□ 0.95
PDGFAP04085 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
PDGFAP04085 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC20.98■□□□□ 0.95
PDGFAP04085 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
PDGFAP04085 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
PDGFAP04085 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
PDGFAP04085 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
PDGFAP04085 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
PDGFAP04085 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
PDGFAP04085 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC20.97■□□□□ 0.95
PDGFAP04085 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC20.96■□□□□ 0.95
PDGFAP04085 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC20.96■□□□□ 0.95
PDGFAP04085 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC20.96■□□□□ 0.95
PDGFAP04085 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
PDGFAP04085 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC20.96■□□□□ 0.95
PDGFAP04085 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
PDGFAP04085 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
PDGFAP04085 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC20.96■□□□□ 0.95
PDGFAP04085 SLC6A10P-202ENST00000431994 2058 ntBASIC20.96■□□□□ 0.95
PDGFAP04085 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
PDGFAP04085 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
PDGFAP04085 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
PDGFAP04085 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
PDGFAP04085 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC20.95■□□□□ 0.94
PDGFAP04085 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
PDGFAP04085 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
PDGFAP04085 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
PDGFAP04085 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
PDGFAP04085 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC20.95■□□□□ 0.94
PDGFAP04085 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 21.2 ms