Protein–RNA interactions for Protein: P03999

OPN1SW, Short-wave-sensitive opsin 1, humanhuman

Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
OPN1SWP03999 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC21.07■□□□□ 0.96
OPN1SWP03999 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC21.06■□□□□ 0.96
OPN1SWP03999 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
OPN1SWP03999 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
OPN1SWP03999 STK25-234ENST00000535007 2459 ntTSL 2 BASIC21.06■□□□□ 0.96
OPN1SWP03999 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
OPN1SWP03999 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
OPN1SWP03999 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC21.05■□□□□ 0.96
OPN1SWP03999 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
OPN1SWP03999 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
OPN1SWP03999 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
OPN1SWP03999 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
OPN1SWP03999 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
OPN1SWP03999 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC21.05■□□□□ 0.96
OPN1SWP03999 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC21.05■□□□□ 0.96
OPN1SWP03999 NTF6A-201ENST00000591175 560 ntBASIC21.05■□□□□ 0.96
OPN1SWP03999 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
OPN1SWP03999 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
OPN1SWP03999 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
OPN1SWP03999 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
OPN1SWP03999 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
OPN1SWP03999 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC21.04■□□□□ 0.96
OPN1SWP03999 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
OPN1SWP03999 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
OPN1SWP03999 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
OPN1SWP03999 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC21.04■□□□□ 0.96
OPN1SWP03999 AC120024.1-201ENST00000562672 995 ntBASIC21.04■□□□□ 0.96
OPN1SWP03999 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC21.04■□□□□ 0.96
OPN1SWP03999 AC019171.1-201ENST00000601251 1056 ntBASIC21.04■□□□□ 0.96
OPN1SWP03999 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
OPN1SWP03999 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC21.04■□□□□ 0.96
OPN1SWP03999 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
OPN1SWP03999 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC21.04■□□□□ 0.96
OPN1SWP03999 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
OPN1SWP03999 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC21.03■□□□□ 0.96
OPN1SWP03999 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
OPN1SWP03999 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
OPN1SWP03999 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
OPN1SWP03999 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
OPN1SWP03999 COMT-203ENST00000403184 2217 ntTSL 2 BASIC21.03■□□□□ 0.96
OPN1SWP03999 COPRS-201ENST00000302362 968 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
OPN1SWP03999 MTX2-204ENST00000443241 799 ntTSL 3 BASIC21.03■□□□□ 0.96
OPN1SWP03999 AC022616.5-201ENST00000518796 181 ntBASIC21.03■□□□□ 0.96
OPN1SWP03999 BHLHE23-202ENST00000612929 1109 ntBASIC21.03■□□□□ 0.96
OPN1SWP03999 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC21.03■□□□□ 0.96
OPN1SWP03999 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC21.03■□□□□ 0.96
OPN1SWP03999 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
OPN1SWP03999 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC21.02■□□□□ 0.96
OPN1SWP03999 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
OPN1SWP03999 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC21.02■□□□□ 0.96
OPN1SWP03999 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC21.02■□□□□ 0.96
OPN1SWP03999 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC21.02■□□□□ 0.96
OPN1SWP03999 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC21.02■□□□□ 0.96
OPN1SWP03999 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
OPN1SWP03999 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
OPN1SWP03999 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
OPN1SWP03999 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
OPN1SWP03999 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
OPN1SWP03999 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
OPN1SWP03999 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC21.01■□□□□ 0.95
OPN1SWP03999 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC21.01■□□□□ 0.95
OPN1SWP03999 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
OPN1SWP03999 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC21■□□□□ 0.95
OPN1SWP03999 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC21■□□□□ 0.95
OPN1SWP03999 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC21■□□□□ 0.95
OPN1SWP03999 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC21■□□□□ 0.95
OPN1SWP03999 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC21■□□□□ 0.95
OPN1SWP03999 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
OPN1SWP03999 LBH-205ENST00000407930 756 ntTSL 2 BASIC21■□□□□ 0.95
OPN1SWP03999 PYY2-202ENST00000441253 1076 ntTSL 1 (best) BASIC21■□□□□ 0.95
OPN1SWP03999 PVT1_1.1-201ENST00000615125 194 ntBASIC21■□□□□ 0.95
OPN1SWP03999 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC21■□□□□ 0.95
OPN1SWP03999 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
OPN1SWP03999 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC21■□□□□ 0.95
OPN1SWP03999 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
OPN1SWP03999 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC20.99■□□□□ 0.95
OPN1SWP03999 AC004987.1-201ENST00000428627 508 ntBASIC20.99■□□□□ 0.95
OPN1SWP03999 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
OPN1SWP03999 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC20.99■□□□□ 0.95
OPN1SWP03999 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
OPN1SWP03999 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC20.99■□□□□ 0.95
OPN1SWP03999 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
OPN1SWP03999 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC20.99■□□□□ 0.95
OPN1SWP03999 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC20.98■□□□□ 0.95
OPN1SWP03999 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
OPN1SWP03999 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC20.98■□□□□ 0.95
OPN1SWP03999 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC20.98■□□□□ 0.95
OPN1SWP03999 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
OPN1SWP03999 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
OPN1SWP03999 AF131216.4-201ENST00000638924 1588 ntBASIC20.98■□□□□ 0.95
OPN1SWP03999 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
OPN1SWP03999 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
OPN1SWP03999 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC20.98■□□□□ 0.95
OPN1SWP03999 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
OPN1SWP03999 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
OPN1SWP03999 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
OPN1SWP03999 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
OPN1SWP03999 BEX3-202ENST00000372634 753 ntTSL 2 BASIC20.97■□□□□ 0.95
OPN1SWP03999 IDNK-201ENST00000376417 511 ntTSL 5 BASIC20.97■□□□□ 0.95
OPN1SWP03999 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 63.5 ms