Protein–RNA interactions for Protein: O60885

BRD4, Bromodomain-containing protein 4, humanhuman

Predicted RBP Predictions only

Length 1,362 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRD4O60885 AC104564.3-201ENST00000582367 638 ntBASIC31.43■■■□□ 2.62
BRD4O60885 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC31.43■■■□□ 2.62
BRD4O60885 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC31.42■■■□□ 2.62
BRD4O60885 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC31.42■■■□□ 2.62
BRD4O60885 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC31.42■■■□□ 2.62
BRD4O60885 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC31.42■■■□□ 2.62
BRD4O60885 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC31.41■■■□□ 2.62
BRD4O60885 C17orf82-201ENST00000623772 1530 ntBASIC31.41■■■□□ 2.62
BRD4O60885 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC31.41■■■□□ 2.62
BRD4O60885 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC31.41■■■□□ 2.62
BRD4O60885 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC31.41■■■□□ 2.62
BRD4O60885 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC31.41■■■□□ 2.62
BRD4O60885 AC009102.2-201ENST00000606772 1639 ntBASIC31.41■■■□□ 2.62
BRD4O60885 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC31.41■■■□□ 2.62
BRD4O60885 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC31.41■■■□□ 2.62
BRD4O60885 CA15P2-201ENST00000611168 834 ntBASIC31.41■■■□□ 2.62
BRD4O60885 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC31.4■■■□□ 2.62
BRD4O60885 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC31.4■■■□□ 2.62
BRD4O60885 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC31.4■■■□□ 2.62
BRD4O60885 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC31.4■■■□□ 2.62
BRD4O60885 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC31.4■■■□□ 2.62
BRD4O60885 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC31.39■■■□□ 2.62
BRD4O60885 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC31.39■■■□□ 2.62
BRD4O60885 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC31.39■■■□□ 2.62
BRD4O60885 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC31.39■■■□□ 2.62
BRD4O60885 AC241377.3-202ENST00000626088 1088 ntBASIC31.39■■■□□ 2.62
BRD4O60885 AC241585.3-202ENST00000628937 1088 ntBASIC31.39■■■□□ 2.62
BRD4O60885 AC245100.8-202ENST00000629247 1058 ntBASIC31.39■■■□□ 2.62
BRD4O60885 AL022069.1-201ENST00000568025 1636 ntBASIC31.39■■■□□ 2.62
BRD4O60885 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC31.38■■■□□ 2.61
BRD4O60885 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC31.38■■■□□ 2.61
BRD4O60885 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC31.38■■■□□ 2.61
BRD4O60885 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC31.38■■■□□ 2.61
BRD4O60885 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC31.38■■■□□ 2.61
BRD4O60885 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC31.38■■■□□ 2.61
BRD4O60885 AC097381.1-201ENST00000429019 1296 ntBASIC31.38■■■□□ 2.61
BRD4O60885 AC099791.2-201ENST00000605725 427 ntBASIC31.38■■■□□ 2.61
BRD4O60885 AC092666.2-201ENST00000613287 246 ntBASIC31.38■■■□□ 2.61
BRD4O60885 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC31.37■■■□□ 2.61
BRD4O60885 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC31.37■■■□□ 2.61
BRD4O60885 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC31.36■■■□□ 2.61
BRD4O60885 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC31.36■■■□□ 2.61
BRD4O60885 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC31.36■■■□□ 2.61
BRD4O60885 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC31.36■■■□□ 2.61
BRD4O60885 AC136469.2-201ENST00000623944 1028 ntBASIC31.36■■■□□ 2.61
BRD4O60885 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC31.35■■■□□ 2.61
BRD4O60885 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC31.35■■■□□ 2.61
BRD4O60885 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC31.35■■■□□ 2.61
BRD4O60885 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC31.35■■■□□ 2.61
BRD4O60885 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC31.35■■■□□ 2.61
BRD4O60885 AL161729.1-201ENST00000604104 1402 ntBASIC31.34■■■□□ 2.61
BRD4O60885 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC31.34■■■□□ 2.61
BRD4O60885 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC31.34■■■□□ 2.61
BRD4O60885 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC31.34■■■□□ 2.61
BRD4O60885 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC31.34■■■□□ 2.61
BRD4O60885 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC31.34■■■□□ 2.61
BRD4O60885 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC31.34■■■□□ 2.61
BRD4O60885 AC004812.2-201ENST00000611079 2094 ntBASIC31.34■■■□□ 2.61
BRD4O60885 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC31.34■■■□□ 2.61
BRD4O60885 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC31.34■■■□□ 2.61
BRD4O60885 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC31.33■■■□□ 2.61
BRD4O60885 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC31.33■■■□□ 2.61
BRD4O60885 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC31.33■■■□□ 2.61
BRD4O60885 MAG-206ENST00000597035 542 ntTSL 4 BASIC31.33■■■□□ 2.61
BRD4O60885 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC31.33■■■□□ 2.61
BRD4O60885 THRA-202ENST00000394121 2260 ntTSL 2 BASIC31.33■■■□□ 2.61
BRD4O60885 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC31.33■■■□□ 2.61
BRD4O60885 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC31.33■■■□□ 2.61
BRD4O60885 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC31.33■■■□□ 2.61
BRD4O60885 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC31.33■■■□□ 2.61
BRD4O60885 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC31.32■■■□□ 2.6
BRD4O60885 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC31.32■■■□□ 2.6
BRD4O60885 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC31.32■■■□□ 2.6
BRD4O60885 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC31.32■■■□□ 2.6
BRD4O60885 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC31.31■■■□□ 2.6
BRD4O60885 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC31.31■■■□□ 2.6
BRD4O60885 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC31.31■■■□□ 2.6
BRD4O60885 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC31.31■■■□□ 2.6
BRD4O60885 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC31.31■■■□□ 2.6
BRD4O60885 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC31.31■■■□□ 2.6
BRD4O60885 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC31.31■■■□□ 2.6
BRD4O60885 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC31.31■■■□□ 2.6
BRD4O60885 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC31.3■■■□□ 2.6
BRD4O60885 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC31.3■■■□□ 2.6
BRD4O60885 CD37-213ENST00000598095 1598 ntTSL 2 BASIC31.3■■■□□ 2.6
BRD4O60885 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC31.3■■■□□ 2.6
BRD4O60885 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC31.3■■■□□ 2.6
BRD4O60885 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC31.3■■■□□ 2.6
BRD4O60885 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC31.3■■■□□ 2.6
BRD4O60885 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC31.3■■■□□ 2.6
BRD4O60885 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC31.3■■■□□ 2.6
BRD4O60885 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC31.3■■■□□ 2.6
BRD4O60885 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC31.29■■■□□ 2.6
BRD4O60885 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC31.29■■■□□ 2.6
BRD4O60885 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC31.28■■■□□ 2.6
BRD4O60885 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC31.28■■■□□ 2.6
BRD4O60885 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC31.28■■■□□ 2.6
BRD4O60885 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC31.28■■■□□ 2.6
BRD4O60885 HES6-206ENST00000409574 738 ntTSL 2 BASIC31.28■■■□□ 2.6
BRD4O60885 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC31.28■■■□□ 2.6
Retrieved 100 of 98,524 protein–RNA pairs in 15.6 ms