Protein–RNA interactions for Protein: O60330

PCDHGA12, Protocadherin gamma-A12, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA12O60330 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
PCDHGA12O60330 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC22.35■■□□□ 1.17
PCDHGA12O60330 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC22.35■■□□□ 1.17
PCDHGA12O60330 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC22.35■■□□□ 1.17
PCDHGA12O60330 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC22.35■■□□□ 1.17
PCDHGA12O60330 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
PCDHGA12O60330 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC22.35■■□□□ 1.17
PCDHGA12O60330 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC22.35■■□□□ 1.17
PCDHGA12O60330 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC22.35■■□□□ 1.17
PCDHGA12O60330 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC22.35■■□□□ 1.17
PCDHGA12O60330 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC22.34■■□□□ 1.17
PCDHGA12O60330 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
PCDHGA12O60330 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
PCDHGA12O60330 RHOF-204ENST00000537265 699 ntTSL 2 BASIC22.34■■□□□ 1.17
PCDHGA12O60330 MPST-208ENST00000628507 698 ntTSL 5 BASIC22.34■■□□□ 1.17
PCDHGA12O60330 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC22.34■■□□□ 1.17
PCDHGA12O60330 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
PCDHGA12O60330 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
PCDHGA12O60330 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
PCDHGA12O60330 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC22.34■■□□□ 1.17
PCDHGA12O60330 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC22.33■■□□□ 1.17
PCDHGA12O60330 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
PCDHGA12O60330 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
PCDHGA12O60330 JTB-203ENST00000368589 1216 ntTSL 2 BASIC22.33■■□□□ 1.17
PCDHGA12O60330 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
PCDHGA12O60330 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
PCDHGA12O60330 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC22.33■■□□□ 1.17
PCDHGA12O60330 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC22.33■■□□□ 1.17
PCDHGA12O60330 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC22.33■■□□□ 1.17
PCDHGA12O60330 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC22.33■■□□□ 1.17
PCDHGA12O60330 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC22.33■■□□□ 1.16
PCDHGA12O60330 DYRK2-203ENST00000393555 2209 ntAPPRIS ALT1 TSL 1 (best) BASIC22.33■■□□□ 1.16
PCDHGA12O60330 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC22.32■■□□□ 1.16
PCDHGA12O60330 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
PCDHGA12O60330 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
PCDHGA12O60330 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC22.32■■□□□ 1.16
PCDHGA12O60330 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
PCDHGA12O60330 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
PCDHGA12O60330 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC22.32■■□□□ 1.16
PCDHGA12O60330 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC22.32■■□□□ 1.16
PCDHGA12O60330 AC233992.3-201ENST00000607491 485 ntBASIC22.32■■□□□ 1.16
PCDHGA12O60330 MIR6089-201ENST00000616698 64 ntBASIC22.32■■□□□ 1.16
PCDHGA12O60330 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC22.32■■□□□ 1.16
PCDHGA12O60330 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
PCDHGA12O60330 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC22.31■■□□□ 1.16
PCDHGA12O60330 BX842568.3-201ENST00000418104 571 ntBASIC22.31■■□□□ 1.16
PCDHGA12O60330 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
PCDHGA12O60330 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
PCDHGA12O60330 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC22.31■■□□□ 1.16
PCDHGA12O60330 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC22.3■■□□□ 1.16
PCDHGA12O60330 AC142381.3-201ENST00000568208 1670 ntBASIC22.3■■□□□ 1.16
PCDHGA12O60330 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
PCDHGA12O60330 MED17-227ENST00000640521 2047 ntTSL 5 BASIC22.3■■□□□ 1.16
PCDHGA12O60330 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
PCDHGA12O60330 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC22.3■■□□□ 1.16
PCDHGA12O60330 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC22.3■■□□□ 1.16
PCDHGA12O60330 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
PCDHGA12O60330 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
PCDHGA12O60330 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
PCDHGA12O60330 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC22.29■■□□□ 1.16
PCDHGA12O60330 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC22.29■■□□□ 1.16
PCDHGA12O60330 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
PCDHGA12O60330 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
PCDHGA12O60330 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC22.29■■□□□ 1.16
PCDHGA12O60330 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
PCDHGA12O60330 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC22.29■■□□□ 1.16
PCDHGA12O60330 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC22.29■■□□□ 1.16
PCDHGA12O60330 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC22.29■■□□□ 1.16
PCDHGA12O60330 SLC6A10P-202ENST00000431994 2058 ntBASIC22.29■■□□□ 1.16
PCDHGA12O60330 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC22.29■■□□□ 1.16
PCDHGA12O60330 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
PCDHGA12O60330 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
PCDHGA12O60330 RARA-203ENST00000394086 2008 ntTSL 2 BASIC22.28■■□□□ 1.16
PCDHGA12O60330 AK1-201ENST00000223836 736 ntTSL 3 BASIC22.28■■□□□ 1.16
PCDHGA12O60330 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
PCDHGA12O60330 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
PCDHGA12O60330 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC22.28■■□□□ 1.16
PCDHGA12O60330 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC22.28■■□□□ 1.16
PCDHGA12O60330 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC22.28■■□□□ 1.16
PCDHGA12O60330 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC22.28■■□□□ 1.16
PCDHGA12O60330 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC22.27■■□□□ 1.16
PCDHGA12O60330 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
PCDHGA12O60330 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC22.27■■□□□ 1.16
PCDHGA12O60330 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC22.27■■□□□ 1.16
PCDHGA12O60330 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC22.27■■□□□ 1.16
PCDHGA12O60330 MIR3181-201ENST00000578512 73 ntBASIC22.27■■□□□ 1.16
PCDHGA12O60330 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC22.27■■□□□ 1.16
PCDHGA12O60330 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
PCDHGA12O60330 PREB-202ENST00000406567 1910 ntTSL 5 BASIC22.27■■□□□ 1.16
PCDHGA12O60330 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.15
PCDHGA12O60330 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC22.26■■□□□ 1.15
PCDHGA12O60330 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC22.26■■□□□ 1.15
PCDHGA12O60330 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
PCDHGA12O60330 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC22.26■■□□□ 1.15
PCDHGA12O60330 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
PCDHGA12O60330 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
PCDHGA12O60330 AC009086.3-201ENST00000623486 1008 ntBASIC22.26■■□□□ 1.15
PCDHGA12O60330 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
PCDHGA12O60330 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC22.26■■□□□ 1.15
PCDHGA12O60330 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC22.25■■□□□ 1.15
Retrieved 100 of 98,524 protein–RNA pairs in 29.6 ms