Protein–RNA interactions for Protein: O43316

PAX4, Paired box protein Pax-4, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PAX4O43316 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
PAX4O43316 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
PAX4O43316 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
PAX4O43316 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
PAX4O43316 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC16.04■□□□□ 0.16
PAX4O43316 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC16.04■□□□□ 0.16
PAX4O43316 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC16.04■□□□□ 0.16
PAX4O43316 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
PAX4O43316 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
PAX4O43316 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
PAX4O43316 ALDH1A3-203ENST00000557963 1670 ntBASIC16.04■□□□□ 0.16
PAX4O43316 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
PAX4O43316 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
PAX4O43316 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
PAX4O43316 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
PAX4O43316 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
PAX4O43316 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
PAX4O43316 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
PAX4O43316 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
PAX4O43316 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
PAX4O43316 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC16.03■□□□□ 0.16
PAX4O43316 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
PAX4O43316 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
PAX4O43316 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
PAX4O43316 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
PAX4O43316 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC16.03■□□□□ 0.16
PAX4O43316 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
PAX4O43316 TSPY9P-201ENST00000440215 945 ntBASIC16.03■□□□□ 0.16
PAX4O43316 TSPY11P-201ENST00000442607 1045 ntBASIC16.03■□□□□ 0.16
PAX4O43316 MTDHP2-201ENST00000601468 714 ntBASIC16.03■□□□□ 0.16
PAX4O43316 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC16.03■□□□□ 0.16
PAX4O43316 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC16.03■□□□□ 0.16
PAX4O43316 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
PAX4O43316 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
PAX4O43316 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC16.03■□□□□ 0.16
PAX4O43316 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
PAX4O43316 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC16.03■□□□□ 0.16
PAX4O43316 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
PAX4O43316 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
PAX4O43316 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC16.02■□□□□ 0.16
PAX4O43316 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC16.02■□□□□ 0.16
PAX4O43316 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
PAX4O43316 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
PAX4O43316 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
PAX4O43316 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.16
PAX4O43316 HES6-204ENST00000409182 863 ntTSL 2 BASIC16.02■□□□□ 0.16
PAX4O43316 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
PAX4O43316 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC16.02■□□□□ 0.15
PAX4O43316 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
PAX4O43316 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.15
PAX4O43316 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC16.02■□□□□ 0.15
PAX4O43316 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.15
PAX4O43316 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
PAX4O43316 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
PAX4O43316 REST-206ENST00000612429 1376 ntTSL 5 BASIC16.01■□□□□ 0.15
PAX4O43316 REST-207ENST00000616975 1370 ntTSL 5 BASIC16.01■□□□□ 0.15
PAX4O43316 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
PAX4O43316 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC16.01■□□□□ 0.15
PAX4O43316 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
PAX4O43316 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
PAX4O43316 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
PAX4O43316 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
PAX4O43316 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
PAX4O43316 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
PAX4O43316 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
PAX4O43316 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
PAX4O43316 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
PAX4O43316 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
PAX4O43316 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
PAX4O43316 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC16■□□□□ 0.15
PAX4O43316 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
PAX4O43316 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC16■□□□□ 0.15
PAX4O43316 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC16■□□□□ 0.15
PAX4O43316 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
PAX4O43316 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC16■□□□□ 0.15
PAX4O43316 OR2A1-AS1-204ENST00000470435 602 ntBASIC16■□□□□ 0.15
PAX4O43316 TRIR-205ENST00000592273 783 ntTSL 3 BASIC16■□□□□ 0.15
PAX4O43316 MIR6722-201ENST00000617286 78 ntBASIC16■□□□□ 0.15
PAX4O43316 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC16■□□□□ 0.15
PAX4O43316 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC16■□□□□ 0.15
PAX4O43316 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
PAX4O43316 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC16■□□□□ 0.15
PAX4O43316 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
PAX4O43316 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
PAX4O43316 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
PAX4O43316 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
PAX4O43316 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
PAX4O43316 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
PAX4O43316 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
PAX4O43316 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC15.99■□□□□ 0.15
PAX4O43316 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
PAX4O43316 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC15.99■□□□□ 0.15
PAX4O43316 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
PAX4O43316 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC15.99■□□□□ 0.15
PAX4O43316 AC010997.5-201ENST00000609182 354 ntBASIC15.99■□□□□ 0.15
PAX4O43316 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
PAX4O43316 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
PAX4O43316 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC15.99■□□□□ 0.15
PAX4O43316 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
PAX4O43316 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC15.99■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 14 ms