Protein–RNA interactions for Protein: O14562

UBFD1, Ubiquitin domain-containing protein UBFD1, humanhuman

Known RBP Predictions only

Length 309 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1O14562 TNFRSF12A-201ENST00000326577 1033 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
UBFD1O14562 BEX3-202ENST00000372634 753 ntTSL 2 BASIC21.99■■□□□ 1.11
UBFD1O14562 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC21.99■■□□□ 1.11
UBFD1O14562 MIR4281-201ENST00000580852 62 ntBASIC21.99■■□□□ 1.11
UBFD1O14562 KLF16-204ENST00000617223 1133 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
UBFD1O14562 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC21.99■■□□□ 1.11
UBFD1O14562 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC21.99■■□□□ 1.11
UBFD1O14562 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC21.99■■□□□ 1.11
UBFD1O14562 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
UBFD1O14562 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC21.99■■□□□ 1.11
UBFD1O14562 KRT18P24-201ENST00000344739 1156 ntBASIC21.98■■□□□ 1.11
UBFD1O14562 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC21.98■■□□□ 1.11
UBFD1O14562 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
UBFD1O14562 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
UBFD1O14562 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
UBFD1O14562 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
UBFD1O14562 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC21.98■■□□□ 1.11
UBFD1O14562 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC21.98■■□□□ 1.11
UBFD1O14562 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC21.97■■□□□ 1.11
UBFD1O14562 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC21.97■■□□□ 1.11
UBFD1O14562 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC21.97■■□□□ 1.11
UBFD1O14562 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC21.97■■□□□ 1.11
UBFD1O14562 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC21.97■■□□□ 1.11
UBFD1O14562 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC21.97■■□□□ 1.11
UBFD1O14562 AC010980.1-201ENST00000587192 1142 ntBASIC21.97■■□□□ 1.11
UBFD1O14562 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
UBFD1O14562 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC21.97■■□□□ 1.11
UBFD1O14562 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
UBFD1O14562 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
UBFD1O14562 STK25-234ENST00000535007 2459 ntTSL 2 BASIC21.97■■□□□ 1.11
UBFD1O14562 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC21.97■■□□□ 1.11
UBFD1O14562 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC21.97■■□□□ 1.11
UBFD1O14562 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
UBFD1O14562 COMT-203ENST00000403184 2217 ntTSL 2 BASIC21.96■■□□□ 1.11
UBFD1O14562 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
UBFD1O14562 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC21.96■■□□□ 1.11
UBFD1O14562 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
UBFD1O14562 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
UBFD1O14562 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
UBFD1O14562 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC21.96■■□□□ 1.11
UBFD1O14562 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
UBFD1O14562 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC21.96■■□□□ 1.11
UBFD1O14562 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC21.96■■□□□ 1.11
UBFD1O14562 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
UBFD1O14562 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.11
UBFD1O14562 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
UBFD1O14562 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC21.95■■□□□ 1.1
UBFD1O14562 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC21.95■■□□□ 1.1
UBFD1O14562 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC21.95■■□□□ 1.1
UBFD1O14562 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
UBFD1O14562 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
UBFD1O14562 AC079630.1-202ENST00000618127 1840 ntBASIC21.94■■□□□ 1.1
UBFD1O14562 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
UBFD1O14562 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC21.94■■□□□ 1.1
UBFD1O14562 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
UBFD1O14562 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC21.94■■□□□ 1.1
UBFD1O14562 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
UBFD1O14562 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC21.94■■□□□ 1.1
UBFD1O14562 THA1P-201ENST00000590384 1145 ntBASIC21.94■■□□□ 1.1
UBFD1O14562 AC074183.2-201ENST00000623112 922 ntBASIC21.94■■□□□ 1.1
UBFD1O14562 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
UBFD1O14562 TSPY13P-201ENST00000338964 914 ntBASIC21.93■■□□□ 1.1
UBFD1O14562 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
UBFD1O14562 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC21.93■■□□□ 1.1
UBFD1O14562 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC21.93■■□□□ 1.1
UBFD1O14562 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC21.93■■□□□ 1.1
UBFD1O14562 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC21.93■■□□□ 1.1
UBFD1O14562 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC21.93■■□□□ 1.1
UBFD1O14562 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC21.92■■□□□ 1.1
UBFD1O14562 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
UBFD1O14562 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC21.92■■□□□ 1.1
UBFD1O14562 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC21.92■■□□□ 1.1
UBFD1O14562 AC004448.1-201ENST00000458332 883 ntBASIC21.92■■□□□ 1.1
UBFD1O14562 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
UBFD1O14562 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC21.92■■□□□ 1.1
UBFD1O14562 GCA-201ENST00000233612 1694 ntTSL 2 BASIC21.91■■□□□ 1.1
UBFD1O14562 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
UBFD1O14562 GUSBP5-202ENST00000510805 1989 ntBASIC21.91■■□□□ 1.1
UBFD1O14562 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC21.91■■□□□ 1.1
UBFD1O14562 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
UBFD1O14562 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC21.91■■□□□ 1.1
UBFD1O14562 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
UBFD1O14562 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
UBFD1O14562 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
UBFD1O14562 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC21.9■■□□□ 1.1
UBFD1O14562 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC21.9■■□□□ 1.1
UBFD1O14562 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC21.9■■□□□ 1.1
UBFD1O14562 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
UBFD1O14562 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC21.9■■□□□ 1.1
UBFD1O14562 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC21.9■■□□□ 1.1
UBFD1O14562 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
UBFD1O14562 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC21.89■■□□□ 1.1
UBFD1O14562 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
UBFD1O14562 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC21.89■■□□□ 1.09
UBFD1O14562 GUK1-208ENST00000366728 842 ntTSL 2 BASIC21.89■■□□□ 1.09
UBFD1O14562 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC21.89■■□□□ 1.09
UBFD1O14562 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC21.89■■□□□ 1.09
UBFD1O14562 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
UBFD1O14562 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
UBFD1O14562 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC21.89■■□□□ 1.09
Retrieved 100 of 98,524 protein–RNA pairs in 16.7 ms