Protein–RNA interactions for Protein: H3BVE0

BOLA2-SMG1P6, BOLA2-SMG1P6 readthrough (Fragment), humanhuman

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BOLA2-SMG1P6H3BVE0 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.75
BOLA2-SMG1P6H3BVE0 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC19.77■□□□□ 0.75
BOLA2-SMG1P6H3BVE0 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
BOLA2-SMG1P6H3BVE0 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
BOLA2-SMG1P6H3BVE0 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
BOLA2-SMG1P6H3BVE0 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
BOLA2-SMG1P6H3BVE0 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
BOLA2-SMG1P6H3BVE0 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
BOLA2-SMG1P6H3BVE0 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
BOLA2-SMG1P6H3BVE0 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
BOLA2-SMG1P6H3BVE0 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
BOLA2-SMG1P6H3BVE0 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
BOLA2-SMG1P6H3BVE0 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC19.76■□□□□ 0.75
BOLA2-SMG1P6H3BVE0 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
BOLA2-SMG1P6H3BVE0 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
BOLA2-SMG1P6H3BVE0 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
BOLA2-SMG1P6H3BVE0 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
BOLA2-SMG1P6H3BVE0 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
BOLA2-SMG1P6H3BVE0 ANOS2P-203ENST00000472227 1816 ntBASIC19.76■□□□□ 0.75
BOLA2-SMG1P6H3BVE0 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
BOLA2-SMG1P6H3BVE0 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC19.76■□□□□ 0.75
BOLA2-SMG1P6H3BVE0 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
BOLA2-SMG1P6H3BVE0 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC19.76■□□□□ 0.75
BOLA2-SMG1P6H3BVE0 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC19.75■□□□□ 0.75
BOLA2-SMG1P6H3BVE0 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
BOLA2-SMG1P6H3BVE0 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC19.75■□□□□ 0.75
BOLA2-SMG1P6H3BVE0 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
BOLA2-SMG1P6H3BVE0 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
BOLA2-SMG1P6H3BVE0 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC19.75■□□□□ 0.75
BOLA2-SMG1P6H3BVE0 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
BOLA2-SMG1P6H3BVE0 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
BOLA2-SMG1P6H3BVE0 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC19.75■□□□□ 0.75
BOLA2-SMG1P6H3BVE0 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
BOLA2-SMG1P6H3BVE0 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
BOLA2-SMG1P6H3BVE0 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
BOLA2-SMG1P6H3BVE0 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
BOLA2-SMG1P6H3BVE0 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC19.74■□□□□ 0.75
BOLA2-SMG1P6H3BVE0 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC19.74■□□□□ 0.75
BOLA2-SMG1P6H3BVE0 C11orf96-202ENST00000528572 1834 ntBASIC19.74■□□□□ 0.75
BOLA2-SMG1P6H3BVE0 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC19.74■□□□□ 0.75
BOLA2-SMG1P6H3BVE0 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
BOLA2-SMG1P6H3BVE0 AUTS2-202ENST00000403018 957 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
BOLA2-SMG1P6H3BVE0 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
BOLA2-SMG1P6H3BVE0 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
BOLA2-SMG1P6H3BVE0 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
BOLA2-SMG1P6H3BVE0 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC19.73■□□□□ 0.75
BOLA2-SMG1P6H3BVE0 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
BOLA2-SMG1P6H3BVE0 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
BOLA2-SMG1P6H3BVE0 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
BOLA2-SMG1P6H3BVE0 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
BOLA2-SMG1P6H3BVE0 LINC01521-201ENST00000504184 1943 ntBASIC19.72■□□□□ 0.75
BOLA2-SMG1P6H3BVE0 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
BOLA2-SMG1P6H3BVE0 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
BOLA2-SMG1P6H3BVE0 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
BOLA2-SMG1P6H3BVE0 PCBD2-201ENST00000254908 1223 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
BOLA2-SMG1P6H3BVE0 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
BOLA2-SMG1P6H3BVE0 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC19.72■□□□□ 0.75
BOLA2-SMG1P6H3BVE0 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
BOLA2-SMG1P6H3BVE0 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC19.72■□□□□ 0.75
BOLA2-SMG1P6H3BVE0 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
BOLA2-SMG1P6H3BVE0 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
BOLA2-SMG1P6H3BVE0 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
BOLA2-SMG1P6H3BVE0 FEZ1-201ENST00000278919 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
BOLA2-SMG1P6H3BVE0 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
BOLA2-SMG1P6H3BVE0 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
BOLA2-SMG1P6H3BVE0 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC19.71■□□□□ 0.75
BOLA2-SMG1P6H3BVE0 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
BOLA2-SMG1P6H3BVE0 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
BOLA2-SMG1P6H3BVE0 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
BOLA2-SMG1P6H3BVE0 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC19.71■□□□□ 0.75
BOLA2-SMG1P6H3BVE0 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
BOLA2-SMG1P6H3BVE0 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
BOLA2-SMG1P6H3BVE0 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC19.7■□□□□ 0.74
BOLA2-SMG1P6H3BVE0 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
BOLA2-SMG1P6H3BVE0 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
BOLA2-SMG1P6H3BVE0 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC19.7■□□□□ 0.74
BOLA2-SMG1P6H3BVE0 COMT-203ENST00000403184 2217 ntTSL 2 BASIC19.7■□□□□ 0.74
BOLA2-SMG1P6H3BVE0 CCNYL1-205ENST00000420822 952 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
BOLA2-SMG1P6H3BVE0 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
BOLA2-SMG1P6H3BVE0 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
BOLA2-SMG1P6H3BVE0 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC19.7■□□□□ 0.74
BOLA2-SMG1P6H3BVE0 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
BOLA2-SMG1P6H3BVE0 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC19.69■□□□□ 0.74
BOLA2-SMG1P6H3BVE0 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
BOLA2-SMG1P6H3BVE0 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
BOLA2-SMG1P6H3BVE0 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC19.69■□□□□ 0.74
BOLA2-SMG1P6H3BVE0 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
BOLA2-SMG1P6H3BVE0 HOXB3-211ENST00000490677 1109 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
BOLA2-SMG1P6H3BVE0 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC19.69■□□□□ 0.74
BOLA2-SMG1P6H3BVE0 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC19.69■□□□□ 0.74
BOLA2-SMG1P6H3BVE0 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
BOLA2-SMG1P6H3BVE0 COMMD3-201ENST00000376836 1342 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
BOLA2-SMG1P6H3BVE0 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
BOLA2-SMG1P6H3BVE0 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC19.69■□□□□ 0.74
BOLA2-SMG1P6H3BVE0 AC087289.5-201ENST00000586076 3175 ntBASIC19.69■□□□□ 0.74
BOLA2-SMG1P6H3BVE0 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
BOLA2-SMG1P6H3BVE0 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
BOLA2-SMG1P6H3BVE0 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC19.68■□□□□ 0.74
BOLA2-SMG1P6H3BVE0 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
BOLA2-SMG1P6H3BVE0 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 18.3 ms