Protein–RNA interactions for Protein: A6NCQ9

RNF222, RING finger protein 222, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF222A6NCQ9 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC18.42■□□□□ 0.54
RNF222A6NCQ9 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC18.42■□□□□ 0.54
RNF222A6NCQ9 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
RNF222A6NCQ9 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
RNF222A6NCQ9 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC18.42■□□□□ 0.54
RNF222A6NCQ9 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
RNF222A6NCQ9 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
RNF222A6NCQ9 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
RNF222A6NCQ9 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
RNF222A6NCQ9 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
RNF222A6NCQ9 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
RNF222A6NCQ9 AL161729.1-201ENST00000604104 1402 ntBASIC18.41■□□□□ 0.54
RNF222A6NCQ9 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC18.41■□□□□ 0.54
RNF222A6NCQ9 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
RNF222A6NCQ9 PPP1R35-201ENST00000292330 1031 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
RNF222A6NCQ9 CHST11-203ENST00000547956 936 ntTSL 2 BASIC18.41■□□□□ 0.54
RNF222A6NCQ9 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC18.41■□□□□ 0.54
RNF222A6NCQ9 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
RNF222A6NCQ9 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
RNF222A6NCQ9 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC18.41■□□□□ 0.54
RNF222A6NCQ9 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
RNF222A6NCQ9 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC18.4■□□□□ 0.54
RNF222A6NCQ9 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC18.4■□□□□ 0.54
RNF222A6NCQ9 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
RNF222A6NCQ9 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC18.4■□□□□ 0.54
RNF222A6NCQ9 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
RNF222A6NCQ9 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
RNF222A6NCQ9 HSBP1L1-201ENST00000451882 771 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
RNF222A6NCQ9 CHML-204ENST00000638121 920 ntTSL 2 BASIC18.4■□□□□ 0.54
RNF222A6NCQ9 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
RNF222A6NCQ9 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
RNF222A6NCQ9 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
RNF222A6NCQ9 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
RNF222A6NCQ9 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
RNF222A6NCQ9 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
RNF222A6NCQ9 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC18.4■□□□□ 0.54
RNF222A6NCQ9 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
RNF222A6NCQ9 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
RNF222A6NCQ9 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC18.39■□□□□ 0.54
RNF222A6NCQ9 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.54
RNF222A6NCQ9 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC18.39■□□□□ 0.53
RNF222A6NCQ9 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
RNF222A6NCQ9 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
RNF222A6NCQ9 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
RNF222A6NCQ9 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
RNF222A6NCQ9 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
RNF222A6NCQ9 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
RNF222A6NCQ9 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC18.39■□□□□ 0.53
RNF222A6NCQ9 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC18.39■□□□□ 0.53
RNF222A6NCQ9 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
RNF222A6NCQ9 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC18.39■□□□□ 0.53
RNF222A6NCQ9 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC18.39■□□□□ 0.53
RNF222A6NCQ9 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
RNF222A6NCQ9 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
RNF222A6NCQ9 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
RNF222A6NCQ9 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
RNF222A6NCQ9 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
RNF222A6NCQ9 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
RNF222A6NCQ9 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC18.38■□□□□ 0.53
RNF222A6NCQ9 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
RNF222A6NCQ9 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC18.38■□□□□ 0.53
RNF222A6NCQ9 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
RNF222A6NCQ9 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
RNF222A6NCQ9 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
RNF222A6NCQ9 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
RNF222A6NCQ9 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
RNF222A6NCQ9 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
RNF222A6NCQ9 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC18.37■□□□□ 0.53
RNF222A6NCQ9 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
RNF222A6NCQ9 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
RNF222A6NCQ9 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC18.37■□□□□ 0.53
RNF222A6NCQ9 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
RNF222A6NCQ9 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
RNF222A6NCQ9 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
RNF222A6NCQ9 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC18.37■□□□□ 0.53
RNF222A6NCQ9 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
RNF222A6NCQ9 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
RNF222A6NCQ9 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
RNF222A6NCQ9 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
RNF222A6NCQ9 AC021231.2-201ENST00000594613 730 ntBASIC18.36■□□□□ 0.53
RNF222A6NCQ9 LYNX1-208ENST00000615007 1293 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
RNF222A6NCQ9 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC18.36■□□□□ 0.53
RNF222A6NCQ9 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
RNF222A6NCQ9 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
RNF222A6NCQ9 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC18.35■□□□□ 0.53
RNF222A6NCQ9 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC18.35■□□□□ 0.53
RNF222A6NCQ9 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
RNF222A6NCQ9 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
RNF222A6NCQ9 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
RNF222A6NCQ9 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
RNF222A6NCQ9 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
RNF222A6NCQ9 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
RNF222A6NCQ9 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
RNF222A6NCQ9 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
RNF222A6NCQ9 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
RNF222A6NCQ9 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
RNF222A6NCQ9 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC18.34■□□□□ 0.53
RNF222A6NCQ9 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
RNF222A6NCQ9 AC079630.1-202ENST00000618127 1840 ntBASIC18.34■□□□□ 0.53
RNF222A6NCQ9 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 19 ms