Protein–RNA interactions for Protein: A0A0K0K1D8

TRBV6-1, T-cell receptor beta variable 6-1 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV6-1A0A0K0K1D8 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
TRBV6-1A0A0K0K1D8 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC16.94■□□□□ 0.3
TRBV6-1A0A0K0K1D8 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
TRBV6-1A0A0K0K1D8 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC16.94■□□□□ 0.3
TRBV6-1A0A0K0K1D8 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
TRBV6-1A0A0K0K1D8 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
TRBV6-1A0A0K0K1D8 SRP68-213ENST00000629930 165 ntTSL 5 BASIC16.94■□□□□ 0.3
TRBV6-1A0A0K0K1D8 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
TRBV6-1A0A0K0K1D8 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC16.94■□□□□ 0.3
TRBV6-1A0A0K0K1D8 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC16.94■□□□□ 0.3
TRBV6-1A0A0K0K1D8 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
TRBV6-1A0A0K0K1D8 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC16.93■□□□□ 0.3
TRBV6-1A0A0K0K1D8 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
TRBV6-1A0A0K0K1D8 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
TRBV6-1A0A0K0K1D8 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
TRBV6-1A0A0K0K1D8 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
TRBV6-1A0A0K0K1D8 HES4-202ENST00000428771 1040 ntTSL 2 BASIC16.93■□□□□ 0.3
TRBV6-1A0A0K0K1D8 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC16.93■□□□□ 0.3
TRBV6-1A0A0K0K1D8 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC16.93■□□□□ 0.3
TRBV6-1A0A0K0K1D8 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
TRBV6-1A0A0K0K1D8 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
TRBV6-1A0A0K0K1D8 AC092053.2-201ENST00000640557 1818 ntBASIC16.93■□□□□ 0.3
TRBV6-1A0A0K0K1D8 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
TRBV6-1A0A0K0K1D8 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
TRBV6-1A0A0K0K1D8 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
TRBV6-1A0A0K0K1D8 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
TRBV6-1A0A0K0K1D8 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
TRBV6-1A0A0K0K1D8 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
TRBV6-1A0A0K0K1D8 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
TRBV6-1A0A0K0K1D8 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC16.92■□□□□ 0.3
TRBV6-1A0A0K0K1D8 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
TRBV6-1A0A0K0K1D8 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC16.92■□□□□ 0.3
TRBV6-1A0A0K0K1D8 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
TRBV6-1A0A0K0K1D8 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC16.92■□□□□ 0.3
TRBV6-1A0A0K0K1D8 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
TRBV6-1A0A0K0K1D8 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC16.92■□□□□ 0.3
TRBV6-1A0A0K0K1D8 AC138647.1-201ENST00000427937 648 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
TRBV6-1A0A0K0K1D8 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
TRBV6-1A0A0K0K1D8 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
TRBV6-1A0A0K0K1D8 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
TRBV6-1A0A0K0K1D8 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC16.92■□□□□ 0.3
TRBV6-1A0A0K0K1D8 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
TRBV6-1A0A0K0K1D8 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
TRBV6-1A0A0K0K1D8 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
TRBV6-1A0A0K0K1D8 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
TRBV6-1A0A0K0K1D8 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC16.91■□□□□ 0.3
TRBV6-1A0A0K0K1D8 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC16.91■□□□□ 0.3
TRBV6-1A0A0K0K1D8 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
TRBV6-1A0A0K0K1D8 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
TRBV6-1A0A0K0K1D8 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
TRBV6-1A0A0K0K1D8 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
TRBV6-1A0A0K0K1D8 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
TRBV6-1A0A0K0K1D8 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
TRBV6-1A0A0K0K1D8 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
TRBV6-1A0A0K0K1D8 TSPY4-202ENST00000426950 1179 ntAPPRIS P5 TSL 5 BASIC16.91■□□□□ 0.3
TRBV6-1A0A0K0K1D8 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
TRBV6-1A0A0K0K1D8 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC16.91■□□□□ 0.3
TRBV6-1A0A0K0K1D8 AC139530.1-201ENST00000575312 1977 ntBASIC16.91■□□□□ 0.3
TRBV6-1A0A0K0K1D8 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
TRBV6-1A0A0K0K1D8 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
TRBV6-1A0A0K0K1D8 AC131274.2-201ENST00000580697 1507 ntBASIC16.91■□□□□ 0.3
TRBV6-1A0A0K0K1D8 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
TRBV6-1A0A0K0K1D8 BID-212ENST00000614949 1988 ntTSL 5 BASIC16.9■□□□□ 0.3
TRBV6-1A0A0K0K1D8 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
TRBV6-1A0A0K0K1D8 PITX3-202ENST00000539804 1187 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
TRBV6-1A0A0K0K1D8 C11orf96-202ENST00000528572 1834 ntBASIC16.9■□□□□ 0.3
TRBV6-1A0A0K0K1D8 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC16.9■□□□□ 0.3
TRBV6-1A0A0K0K1D8 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC16.9■□□□□ 0.3
TRBV6-1A0A0K0K1D8 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
TRBV6-1A0A0K0K1D8 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
TRBV6-1A0A0K0K1D8 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC16.9■□□□□ 0.3
TRBV6-1A0A0K0K1D8 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
TRBV6-1A0A0K0K1D8 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
TRBV6-1A0A0K0K1D8 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
TRBV6-1A0A0K0K1D8 AC007375.3-201ENST00000600936 2314 ntBASIC16.9■□□□□ 0.3
TRBV6-1A0A0K0K1D8 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
TRBV6-1A0A0K0K1D8 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
TRBV6-1A0A0K0K1D8 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
TRBV6-1A0A0K0K1D8 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC16.89■□□□□ 0.29
TRBV6-1A0A0K0K1D8 PTPA-210ENST00000414510 1153 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
TRBV6-1A0A0K0K1D8 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC16.89■□□□□ 0.29
TRBV6-1A0A0K0K1D8 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
TRBV6-1A0A0K0K1D8 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC16.89■□□□□ 0.29
TRBV6-1A0A0K0K1D8 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
TRBV6-1A0A0K0K1D8 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
TRBV6-1A0A0K0K1D8 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
TRBV6-1A0A0K0K1D8 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC16.88■□□□□ 0.29
TRBV6-1A0A0K0K1D8 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
TRBV6-1A0A0K0K1D8 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
TRBV6-1A0A0K0K1D8 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
TRBV6-1A0A0K0K1D8 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
TRBV6-1A0A0K0K1D8 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
TRBV6-1A0A0K0K1D8 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
TRBV6-1A0A0K0K1D8 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC16.88■□□□□ 0.29
TRBV6-1A0A0K0K1D8 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
TRBV6-1A0A0K0K1D8 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
TRBV6-1A0A0K0K1D8 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
TRBV6-1A0A0K0K1D8 MANF-204ENST00000528157 1153 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
TRBV6-1A0A0K0K1D8 AC087393.1-201ENST00000582896 145 ntBASIC16.88■□□□□ 0.29
TRBV6-1A0A0K0K1D8 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 79 ms