Protein–RNA interactions for Protein: A0A0J9YWV2

TRBV4-1, T-cell receptor beta variable 4-1 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV4-1A0A0J9YWV2 GAK-223ENST00000628912 497 ntTSL 5 BASIC20.72■□□□□ 0.91
TRBV4-1A0A0J9YWV2 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC20.72■□□□□ 0.91
TRBV4-1A0A0J9YWV2 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
TRBV4-1A0A0J9YWV2 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
TRBV4-1A0A0J9YWV2 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
TRBV4-1A0A0J9YWV2 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC20.72■□□□□ 0.91
TRBV4-1A0A0J9YWV2 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC20.72■□□□□ 0.91
TRBV4-1A0A0J9YWV2 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
TRBV4-1A0A0J9YWV2 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
TRBV4-1A0A0J9YWV2 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
TRBV4-1A0A0J9YWV2 MTERF3-201ENST00000287025 1409 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
TRBV4-1A0A0J9YWV2 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
TRBV4-1A0A0J9YWV2 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
TRBV4-1A0A0J9YWV2 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
TRBV4-1A0A0J9YWV2 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
TRBV4-1A0A0J9YWV2 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC20.71■□□□□ 0.91
TRBV4-1A0A0J9YWV2 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
TRBV4-1A0A0J9YWV2 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC20.71■□□□□ 0.91
TRBV4-1A0A0J9YWV2 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
TRBV4-1A0A0J9YWV2 LINC00526-201ENST00000581067 1875 ntBASIC20.71■□□□□ 0.91
TRBV4-1A0A0J9YWV2 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
TRBV4-1A0A0J9YWV2 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
TRBV4-1A0A0J9YWV2 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.91
TRBV4-1A0A0J9YWV2 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
TRBV4-1A0A0J9YWV2 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
TRBV4-1A0A0J9YWV2 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
TRBV4-1A0A0J9YWV2 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC20.7■□□□□ 0.9
TRBV4-1A0A0J9YWV2 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
TRBV4-1A0A0J9YWV2 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
TRBV4-1A0A0J9YWV2 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
TRBV4-1A0A0J9YWV2 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
TRBV4-1A0A0J9YWV2 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC20.69■□□□□ 0.9
TRBV4-1A0A0J9YWV2 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
TRBV4-1A0A0J9YWV2 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
TRBV4-1A0A0J9YWV2 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
TRBV4-1A0A0J9YWV2 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC20.69■□□□□ 0.9
TRBV4-1A0A0J9YWV2 HYI-210ENST00000486909 905 ntTSL 5 BASIC20.69■□□□□ 0.9
TRBV4-1A0A0J9YWV2 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC20.69■□□□□ 0.9
TRBV4-1A0A0J9YWV2 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC20.69■□□□□ 0.9
TRBV4-1A0A0J9YWV2 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
TRBV4-1A0A0J9YWV2 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
TRBV4-1A0A0J9YWV2 LSR-203ENST00000360798 1963 ntTSL 2 BASIC20.68■□□□□ 0.9
TRBV4-1A0A0J9YWV2 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
TRBV4-1A0A0J9YWV2 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
TRBV4-1A0A0J9YWV2 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
TRBV4-1A0A0J9YWV2 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
TRBV4-1A0A0J9YWV2 MDK-206ENST00000407067 1026 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
TRBV4-1A0A0J9YWV2 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
TRBV4-1A0A0J9YWV2 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC20.68■□□□□ 0.9
TRBV4-1A0A0J9YWV2 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC20.68■□□□□ 0.9
TRBV4-1A0A0J9YWV2 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC20.68■□□□□ 0.9
TRBV4-1A0A0J9YWV2 HSD17B1P1-201ENST00000590052 955 ntBASIC20.68■□□□□ 0.9
TRBV4-1A0A0J9YWV2 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
TRBV4-1A0A0J9YWV2 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC20.68■□□□□ 0.9
TRBV4-1A0A0J9YWV2 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC20.68■□□□□ 0.9
TRBV4-1A0A0J9YWV2 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
TRBV4-1A0A0J9YWV2 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
TRBV4-1A0A0J9YWV2 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
TRBV4-1A0A0J9YWV2 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
TRBV4-1A0A0J9YWV2 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
TRBV4-1A0A0J9YWV2 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
TRBV4-1A0A0J9YWV2 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
TRBV4-1A0A0J9YWV2 AC019171.1-201ENST00000601251 1056 ntBASIC20.67■□□□□ 0.9
TRBV4-1A0A0J9YWV2 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
TRBV4-1A0A0J9YWV2 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC20.67■□□□□ 0.9
TRBV4-1A0A0J9YWV2 GCA-201ENST00000233612 1694 ntTSL 2 BASIC20.67■□□□□ 0.9
TRBV4-1A0A0J9YWV2 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
TRBV4-1A0A0J9YWV2 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
TRBV4-1A0A0J9YWV2 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
TRBV4-1A0A0J9YWV2 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
TRBV4-1A0A0J9YWV2 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
TRBV4-1A0A0J9YWV2 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
TRBV4-1A0A0J9YWV2 AC022616.5-201ENST00000518796 181 ntBASIC20.66■□□□□ 0.9
TRBV4-1A0A0J9YWV2 DUX4L18-201ENST00000553347 1267 ntBASIC20.66■□□□□ 0.9
TRBV4-1A0A0J9YWV2 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
TRBV4-1A0A0J9YWV2 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
TRBV4-1A0A0J9YWV2 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
TRBV4-1A0A0J9YWV2 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC20.65■□□□□ 0.9
TRBV4-1A0A0J9YWV2 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
TRBV4-1A0A0J9YWV2 AC079630.1-202ENST00000618127 1840 ntBASIC20.65■□□□□ 0.9
TRBV4-1A0A0J9YWV2 ECEL1P1-201ENST00000373592 1742 ntBASIC20.65■□□□□ 0.9
TRBV4-1A0A0J9YWV2 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
TRBV4-1A0A0J9YWV2 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
TRBV4-1A0A0J9YWV2 LBH-205ENST00000407930 756 ntTSL 2 BASIC20.65■□□□□ 0.9
TRBV4-1A0A0J9YWV2 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
TRBV4-1A0A0J9YWV2 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
TRBV4-1A0A0J9YWV2 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
TRBV4-1A0A0J9YWV2 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
TRBV4-1A0A0J9YWV2 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
TRBV4-1A0A0J9YWV2 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
TRBV4-1A0A0J9YWV2 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC20.65■□□□□ 0.9
TRBV4-1A0A0J9YWV2 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
TRBV4-1A0A0J9YWV2 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC20.64■□□□□ 0.9
TRBV4-1A0A0J9YWV2 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC20.64■□□□□ 0.9
TRBV4-1A0A0J9YWV2 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
TRBV4-1A0A0J9YWV2 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
TRBV4-1A0A0J9YWV2 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
TRBV4-1A0A0J9YWV2 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
TRBV4-1A0A0J9YWV2 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
TRBV4-1A0A0J9YWV2 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 51 ms