Protein–RNA interactions for Protein: A0A0J9YWF9

TRBV2, T-cell receptor beta variable 2 (Fragment), humanhuman

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV2A0A0J9YWF9 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
TRBV2A0A0J9YWF9 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
TRBV2A0A0J9YWF9 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC19.94■□□□□ 0.78
TRBV2A0A0J9YWF9 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
TRBV2A0A0J9YWF9 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC19.94■□□□□ 0.78
TRBV2A0A0J9YWF9 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
TRBV2A0A0J9YWF9 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
TRBV2A0A0J9YWF9 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
TRBV2A0A0J9YWF9 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
TRBV2A0A0J9YWF9 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
TRBV2A0A0J9YWF9 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC19.94■□□□□ 0.78
TRBV2A0A0J9YWF9 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
TRBV2A0A0J9YWF9 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC19.94■□□□□ 0.78
TRBV2A0A0J9YWF9 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC19.94■□□□□ 0.78
TRBV2A0A0J9YWF9 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC19.94■□□□□ 0.78
TRBV2A0A0J9YWF9 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
TRBV2A0A0J9YWF9 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
TRBV2A0A0J9YWF9 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
TRBV2A0A0J9YWF9 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
TRBV2A0A0J9YWF9 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
TRBV2A0A0J9YWF9 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC19.93■□□□□ 0.78
TRBV2A0A0J9YWF9 RARRES2P2-201ENST00000394842 485 ntBASIC19.93■□□□□ 0.78
TRBV2A0A0J9YWF9 IDNK-203ENST00000405990 629 ntTSL 2 BASIC19.93■□□□□ 0.78
TRBV2A0A0J9YWF9 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
TRBV2A0A0J9YWF9 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
TRBV2A0A0J9YWF9 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
TRBV2A0A0J9YWF9 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
TRBV2A0A0J9YWF9 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
TRBV2A0A0J9YWF9 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC19.93■□□□□ 0.78
TRBV2A0A0J9YWF9 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
TRBV2A0A0J9YWF9 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
TRBV2A0A0J9YWF9 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
TRBV2A0A0J9YWF9 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
TRBV2A0A0J9YWF9 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC19.92■□□□□ 0.78
TRBV2A0A0J9YWF9 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
TRBV2A0A0J9YWF9 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC19.92■□□□□ 0.78
TRBV2A0A0J9YWF9 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
TRBV2A0A0J9YWF9 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
TRBV2A0A0J9YWF9 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC19.92■□□□□ 0.78
TRBV2A0A0J9YWF9 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
TRBV2A0A0J9YWF9 SPCS2P3-201ENST00000500401 656 ntBASIC19.92■□□□□ 0.78
TRBV2A0A0J9YWF9 AL592293.1-201ENST00000502889 1188 ntBASIC19.92■□□□□ 0.78
TRBV2A0A0J9YWF9 HSD17B1P1-201ENST00000590052 955 ntBASIC19.92■□□□□ 0.78
TRBV2A0A0J9YWF9 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC19.92■□□□□ 0.78
TRBV2A0A0J9YWF9 HYI-213ENST00000583037 1322 ntTSL 5 BASIC19.92■□□□□ 0.78
TRBV2A0A0J9YWF9 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
TRBV2A0A0J9YWF9 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
TRBV2A0A0J9YWF9 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
TRBV2A0A0J9YWF9 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
TRBV2A0A0J9YWF9 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC19.92■□□□□ 0.78
TRBV2A0A0J9YWF9 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC19.92■□□□□ 0.78
TRBV2A0A0J9YWF9 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
TRBV2A0A0J9YWF9 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
TRBV2A0A0J9YWF9 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
TRBV2A0A0J9YWF9 EI24-204ENST00000527235 1625 ntTSL 5 BASIC19.91■□□□□ 0.78
TRBV2A0A0J9YWF9 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC19.91■□□□□ 0.78
TRBV2A0A0J9YWF9 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
TRBV2A0A0J9YWF9 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC19.91■□□□□ 0.78
TRBV2A0A0J9YWF9 MIR6765-201ENST00000614092 87 ntBASIC19.91■□□□□ 0.78
TRBV2A0A0J9YWF9 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
TRBV2A0A0J9YWF9 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
TRBV2A0A0J9YWF9 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
TRBV2A0A0J9YWF9 ALDH1A3-203ENST00000557963 1670 ntBASIC19.91■□□□□ 0.78
TRBV2A0A0J9YWF9 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
TRBV2A0A0J9YWF9 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC19.9■□□□□ 0.78
TRBV2A0A0J9YWF9 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
TRBV2A0A0J9YWF9 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
TRBV2A0A0J9YWF9 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
TRBV2A0A0J9YWF9 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
TRBV2A0A0J9YWF9 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
TRBV2A0A0J9YWF9 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
TRBV2A0A0J9YWF9 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC19.9■□□□□ 0.78
TRBV2A0A0J9YWF9 ECEL1P1-201ENST00000373592 1742 ntBASIC19.9■□□□□ 0.78
TRBV2A0A0J9YWF9 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC19.9■□□□□ 0.78
TRBV2A0A0J9YWF9 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
TRBV2A0A0J9YWF9 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
TRBV2A0A0J9YWF9 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
TRBV2A0A0J9YWF9 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC19.9■□□□□ 0.78
TRBV2A0A0J9YWF9 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
TRBV2A0A0J9YWF9 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
TRBV2A0A0J9YWF9 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
TRBV2A0A0J9YWF9 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC19.89■□□□□ 0.77
TRBV2A0A0J9YWF9 LSR-203ENST00000360798 1963 ntTSL 2 BASIC19.89■□□□□ 0.77
TRBV2A0A0J9YWF9 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.77
TRBV2A0A0J9YWF9 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
TRBV2A0A0J9YWF9 LYPD6B-204ENST00000409876 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
TRBV2A0A0J9YWF9 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC19.89■□□□□ 0.77
TRBV2A0A0J9YWF9 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.77
TRBV2A0A0J9YWF9 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.77
TRBV2A0A0J9YWF9 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
TRBV2A0A0J9YWF9 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC19.89■□□□□ 0.77
TRBV2A0A0J9YWF9 AC127496.7-201ENST00000625110 1798 ntBASIC19.89■□□□□ 0.77
TRBV2A0A0J9YWF9 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
TRBV2A0A0J9YWF9 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
TRBV2A0A0J9YWF9 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
TRBV2A0A0J9YWF9 COMT-203ENST00000403184 2217 ntTSL 2 BASIC19.88■□□□□ 0.77
TRBV2A0A0J9YWF9 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
TRBV2A0A0J9YWF9 STK32C-205ENST00000456004 607 ntTSL 2 BASIC19.88■□□□□ 0.77
TRBV2A0A0J9YWF9 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC19.88■□□□□ 0.77
TRBV2A0A0J9YWF9 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 27 ms