Protein–RNA interactions for Protein: Q9P2V4

LRIT1, Leucine-rich repeat, immunoglobulin-like domain and transmembrane domain-containing protein 1, humanhuman

Predictions only

Length 623 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRIT1Q9P2V4 SPACA3-201ENST00000269053 817 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
LRIT1Q9P2V4 GUSBP10-201ENST00000417412 665 ntBASIC13.82□□□□□ -0.2
LRIT1Q9P2V4 OR2T27-202ENST00000460972 1136 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
LRIT1Q9P2V4 RN7SL818P-201ENST00000485099 259 ntBASIC13.82□□□□□ -0.2
LRIT1Q9P2V4 AL691482.3-201ENST00000504773 987 ntTSL 2 BASIC13.82□□□□□ -0.2
LRIT1Q9P2V4 LINC02062-201ENST00000513175 478 ntTSL 3 BASIC13.82□□□□□ -0.2
LRIT1Q9P2V4 RBM4B-202ENST00000524637 867 ntTSL 5 BASIC13.82□□□□□ -0.2
LRIT1Q9P2V4 MAFTRR-203ENST00000567993 685 ntTSL 3 BASIC13.82□□□□□ -0.2
LRIT1Q9P2V4 SPACA3-205ENST00000580599 949 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
LRIT1Q9P2V4 TPGS2-209ENST00000589049 1102 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
LRIT1Q9P2V4 SIGLEC22P-201ENST00000599104 714 ntBASIC13.82□□□□□ -0.2
LRIT1Q9P2V4 SIGLEC22P-202ENST00000602065 544 ntTSL 4 BASIC13.82□□□□□ -0.2
LRIT1Q9P2V4 AL133467.4-201ENST00000602953 725 ntBASIC13.82□□□□□ -0.2
LRIT1Q9P2V4 RN7SL725P-201ENST00000606439 259 ntBASIC13.82□□□□□ -0.2
LRIT1Q9P2V4 AL161773.1-201ENST00000624845 863 ntBASIC13.82□□□□□ -0.2
LRIT1Q9P2V4 LINC00969-294ENST00000627609 992 ntTSL 5 BASIC13.82□□□□□ -0.2
LRIT1Q9P2V4 ZNF596-213ENST00000640035 1163 ntTSL 5 BASIC13.82□□□□□ -0.2
LRIT1Q9P2V4 FAM160A2-203ENST00000524416 3327 ntTSL 2 BASIC13.82□□□□□ -0.2
LRIT1Q9P2V4 MAPKBP1-215ENST00000514566 5394 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
LRIT1Q9P2V4 PPFIBP1-216ENST00000545334 2805 ntTSL 2 BASIC13.82□□□□□ -0.2
LRIT1Q9P2V4 RNF170-209ENST00000534961 4116 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
LRIT1Q9P2V4 RARS2-201ENST00000369536 1818 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
LRIT1Q9P2V4 FAM149A-203ENST00000389354 1815 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
LRIT1Q9P2V4 RNF135-202ENST00000328381 2892 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
LRIT1Q9P2V4 GNAO1-202ENST00000262494 5767 ntAPPRIS ALT1 TSL 1 (best) BASIC13.82□□□□□ -0.2
LRIT1Q9P2V4 ALDOA-209ENST00000563060 1550 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
LRIT1Q9P2V4 TEX264-201ENST00000341333 1340 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
LRIT1Q9P2V4 DBR1-201ENST00000260803 2666 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
LRIT1Q9P2V4 ORC6-201ENST00000219097 1628 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
LRIT1Q9P2V4 MRM2-201ENST00000242257 1601 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
LRIT1Q9P2V4 PFKFB4-201ENST00000232375 3586 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
LRIT1Q9P2V4 MIR22HG-201ENST00000334146 1383 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
LRIT1Q9P2V4 UNC13B-203ENST00000396787 5293 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
LRIT1Q9P2V4 MFRP-201ENST00000360167 1663 ntTSL 2 BASIC13.82□□□□□ -0.2
LRIT1Q9P2V4 GGT6-201ENST00000301395 2534 ntTSL 2 BASIC13.82□□□□□ -0.2
LRIT1Q9P2V4 ZNF587-203ENST00000423137 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
LRIT1Q9P2V4 ESS2-201ENST00000252137 5392 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
LRIT1Q9P2V4 OPA1-203ENST00000361715 6384 ntTSL 5 BASIC13.81□□□□□ -0.2
LRIT1Q9P2V4 LINC00299-202ENST00000442956 2342 ntTSL 2 BASIC13.81□□□□□ -0.2
LRIT1Q9P2V4 C15orf52-202ENST00000397536 4717 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
LRIT1Q9P2V4 SCLY-202ENST00000409736 1774 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
LRIT1Q9P2V4 TFAP2A-213ENST00000482890 2071 ntAPPRIS P3 TSL 5 BASIC13.81□□□□□ -0.2
LRIT1Q9P2V4 FAM149B1-201ENST00000242505 5408 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
LRIT1Q9P2V4 PNPLA6-202ENST00000414982 4522 ntTSL 2 BASIC13.81□□□□□ -0.2
LRIT1Q9P2V4 GPR161-202ENST00000367835 2400 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
LRIT1Q9P2V4 ATP11B-201ENST00000323116 7325 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
LRIT1Q9P2V4 DHX36-213ENST00000496811 6733 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
LRIT1Q9P2V4 MSH5-203ENST00000375750 2775 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
LRIT1Q9P2V4 CASP2-207ENST00000619992 4006 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
LRIT1Q9P2V4 RTEL1-205ENST00000370018 4955 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
LRIT1Q9P2V4 LINC00476-204ENST00000429781 2825 ntTSL 2 BASIC13.81□□□□□ -0.2
LRIT1Q9P2V4 RET-201ENST00000340058 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
LRIT1Q9P2V4 ARHGEF16-201ENST00000378371 2219 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
LRIT1Q9P2V4 LY86-201ENST00000230568 559 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
LRIT1Q9P2V4 CELA2B-201ENST00000375910 923 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
LRIT1Q9P2V4 PDCD5-202ENST00000379316 154 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
LRIT1Q9P2V4 AC012442.2-201ENST00000414784 425 ntTSL 2 BASIC13.81□□□□□ -0.2
LRIT1Q9P2V4 NSUN5P1-203ENST00000422386 972 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
LRIT1Q9P2V4 AC012362.1-201ENST00000434906 739 ntBASIC13.81□□□□□ -0.2
LRIT1Q9P2V4 AC092638.2-201ENST00000441105 947 ntBASIC13.81□□□□□ -0.2
LRIT1Q9P2V4 Z99943.1-201ENST00000451545 718 ntTSL 3 BASIC13.81□□□□□ -0.2
LRIT1Q9P2V4 AC011247.2-201ENST00000457097 233 ntTSL 4 BASIC13.81□□□□□ -0.2
LRIT1Q9P2V4 RNA5SP417-201ENST00000516459 108 ntBASIC13.81□□□□□ -0.2
LRIT1Q9P2V4 AP000911.2-201ENST00000534330 502 ntBASIC13.81□□□□□ -0.2
LRIT1Q9P2V4 FANCA-204ENST00000534992 1088 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
LRIT1Q9P2V4 MAX-218ENST00000557746 571 ntTSL 4 BASIC13.81□□□□□ -0.2
LRIT1Q9P2V4 PDCD5-208ENST00000592786 468 ntTSL 3 BASIC13.81□□□□□ -0.2
LRIT1Q9P2V4 RNASEK-210ENST00000593646 566 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
LRIT1Q9P2V4 AL021707.6-201ENST00000609212 491 ntBASIC13.81□□□□□ -0.2
LRIT1Q9P2V4 ANXA8L1-206ENST00000619162 1109 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
LRIT1Q9P2V4 LIN9-201ENST00000328205 3567 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
LRIT1Q9P2V4 PPP1CB-203ENST00000395366 4893 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
LRIT1Q9P2V4 CSF2RA-219ENST00000501036 1622 ntTSL 2 BASIC13.81□□□□□ -0.2
LRIT1Q9P2V4 SMARCA2-214ENST00000450198 5602 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
LRIT1Q9P2V4 SPRY4-202ENST00000434127 2379 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
LRIT1Q9P2V4 LMX1B-201ENST00000355497 5809 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
LRIT1Q9P2V4 FHL2-206ENST00000408995 1367 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
LRIT1Q9P2V4 TAF1D-203ENST00000448108 2082 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
LRIT1Q9P2V4 ST6GAL2-204ENST00000409382 7275 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
LRIT1Q9P2V4 PRR23C-201ENST00000413199 2791 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
LRIT1Q9P2V4 FER1L4-213ENST00000621044 2778 ntTSL 2 BASIC13.81□□□□□ -0.2
LRIT1Q9P2V4 LIMS2-205ENST00000409455 2500 ntAPPRIS ALT1 TSL 1 (best) BASIC13.81□□□□□ -0.2
LRIT1Q9P2V4 RBBP8-201ENST00000327155 3288 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
LRIT1Q9P2V4 LANCL2-201ENST00000254770 4353 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
LRIT1Q9P2V4 TRAF6-201ENST00000348124 2558 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
LRIT1Q9P2V4 LINC01029-204ENST00000583106 1465 ntTSL 5 BASIC13.8□□□□□ -0.2
LRIT1Q9P2V4 NYNRIN-201ENST00000382554 7857 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
LRIT1Q9P2V4 PPM1B-205ENST00000409432 3025 ntAPPRIS ALT1 TSL 1 (best) BASIC13.8□□□□□ -0.2
LRIT1Q9P2V4 STRADA-243ENST00000640086 1925 ntTSL 5 BASIC13.8□□□□□ -0.2
LRIT1Q9P2V4 GSN-209ENST00000449733 2702 ntTSL 2 BASIC13.8□□□□□ -0.2
LRIT1Q9P2V4 GSPT1-202ENST00000434724 7105 ntAPPRIS P4 TSL 1 (best) BASIC13.8□□□□□ -0.2
LRIT1Q9P2V4 KHDRBS1-202ENST00000327300 2757 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
LRIT1Q9P2V4 AC004943.2-201ENST00000563328 4842 ntTSL 3 BASIC13.8□□□□□ -0.2
LRIT1Q9P2V4 PTK7-210ENST00000471863 2412 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
LRIT1Q9P2V4 ZC3H4-201ENST00000253048 6119 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
LRIT1Q9P2V4 OPCML-IT1-201ENST00000533859 2936 ntTSL 2 BASIC13.8□□□□□ -0.2
LRIT1Q9P2V4 PDPK1-202ENST00000342085 7241 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
LRIT1Q9P2V4 RAB25-201ENST00000361084 1110 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
LRIT1Q9P2V4 SLC25A27-201ENST00000371347 2963 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
LRIT1Q9P2V4 FES-203ENST00000394302 2133 ntTSL 5 BASIC13.8□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 49.8 ms