Protein–RNA interactions for Protein: Q6PCD5

RFWD3, E3 ubiquitin-protein ligase RFWD3, humanhuman

Predictions only

Length 774 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFWD3Q6PCD5 AUTS2-218ENST00000615871 4511 ntTSL 5 BASIC15□□□□□ -0.01
RFWD3Q6PCD5 PAPD7-207ENST00000631941 1902 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
RFWD3Q6PCD5 PTBP1-221ENST00000635647 3691 ntTSL 5 BASIC14.99□□□□□ -0.01
RFWD3Q6PCD5 GABPB1-202ENST00000359031 1633 ntTSL 5 BASIC14.99□□□□□ -0.01
RFWD3Q6PCD5 TFDP1-201ENST00000375370 2648 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
RFWD3Q6PCD5 RASGEF1C-202ENST00000393371 2395 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
RFWD3Q6PCD5 SMG9-211ENST00000601170 2387 ntTSL 2 BASIC14.99□□□□□ -0.01
RFWD3Q6PCD5 CDKN1A-208ENST00000615513 2102 ntAPPRIS P1 TSL 2 BASIC14.99□□□□□ -0.01
RFWD3Q6PCD5 AUTS2-217ENST00000611706 4583 ntTSL 5 BASIC14.99□□□□□ -0.01
RFWD3Q6PCD5 NR3C1-203ENST00000394464 6795 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
RFWD3Q6PCD5 TBC1D22A-201ENST00000337137 3787 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
RFWD3Q6PCD5 SDCBP2-AS1-201ENST00000446423 1811 ntTSL 2 BASIC14.99□□□□□ -0.01
RFWD3Q6PCD5 PKM-220ENST00000568459 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC14.99□□□□□ -0.01
RFWD3Q6PCD5 CD3EAP-202ENST00000589804 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
RFWD3Q6PCD5 FRMD8-202ENST00000355991 3514 ntTSL 2 BASIC14.99□□□□□ -0.01
RFWD3Q6PCD5 ZNF691-206ENST00000372508 1577 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
RFWD3Q6PCD5 MVK-214ENST00000629016 1591 ntTSL 5 BASIC14.99□□□□□ -0.01
RFWD3Q6PCD5 DUSP28-202ENST00000405954 3461 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
RFWD3Q6PCD5 ELN-210ENST00000380584 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
RFWD3Q6PCD5 AC011498.7-201ENST00000624986 2027 ntBASIC14.99□□□□□ -0.01
RFWD3Q6PCD5 MED15-203ENST00000382974 2235 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
RFWD3Q6PCD5 ADCY8-202ENST00000377928 3363 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
RFWD3Q6PCD5 ARF5-201ENST00000000233 1103 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
RFWD3Q6PCD5 MAP2K3-201ENST00000316920 1246 ntTSL 5 BASIC14.99□□□□□ -0.01
RFWD3Q6PCD5 EDF1-202ENST00000371648 809 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
RFWD3Q6PCD5 XBP1P1-201ENST00000436573 652 ntBASIC14.99□□□□□ -0.01
RFWD3Q6PCD5 AL157392.3-216ENST00000437446 462 ntTSL 3 BASIC14.99□□□□□ -0.01
RFWD3Q6PCD5 OR2R1P-201ENST00000441404 914 ntBASIC14.99□□□□□ -0.01
RFWD3Q6PCD5 AC135178.1-201ENST00000458568 537 ntTSL 3 BASIC14.99□□□□□ -0.01
RFWD3Q6PCD5 AC012618.1-201ENST00000461223 412 ntBASIC14.99□□□□□ -0.01
RFWD3Q6PCD5 ZNF527-203ENST00000483919 1142 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
RFWD3Q6PCD5 AC008406.1-201ENST00000509530 541 ntTSL 3 BASIC14.99□□□□□ -0.01
RFWD3Q6PCD5 SORD2P-201ENST00000558556 1069 ntBASIC14.99□□□□□ -0.01
RFWD3Q6PCD5 TMEM219-203ENST00000561899 1249 ntAPPRIS P1 TSL 2 BASIC14.99□□□□□ -0.01
RFWD3Q6PCD5 NFIC-204ENST00000586919 1221 ntTSL 5 BASIC14.99□□□□□ -0.01
RFWD3Q6PCD5 ZNF772-207ENST00000601768 482 ntTSL 3 BASIC14.99□□□□□ -0.01
RFWD3Q6PCD5 IKZF1-217ENST00000612658 962 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
RFWD3Q6PCD5 LINC01668-201ENST00000635001 513 ntTSL 4 BASIC14.99□□□□□ -0.01
RFWD3Q6PCD5 AC138627.1-207ENST00000641560 1006 ntBASIC14.99□□□□□ -0.01
RFWD3Q6PCD5 CYP4B1-201ENST00000271153 2171 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
RFWD3Q6PCD5 CDK20-202ENST00000336654 2176 ntTSL 2 BASIC14.99□□□□□ -0.01
RFWD3Q6PCD5 RPS6KC1-207ENST00000543470 4227 ntTSL 2 BASIC14.99□□□□□ -0.01
RFWD3Q6PCD5 TRIM10-204ENST00000449742 3546 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
RFWD3Q6PCD5 CRLS1-201ENST00000378863 3958 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
RFWD3Q6PCD5 KRT8P21-201ENST00000430398 1491 ntBASIC14.99□□□□□ -0.01
RFWD3Q6PCD5 SPEG-201ENST00000312358 10782 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
RFWD3Q6PCD5 CDH16-202ENST00000394055 2821 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
RFWD3Q6PCD5 AC138028.2-202ENST00000567968 4528 ntTSL 2 BASIC14.99□□□□□ -0.01
RFWD3Q6PCD5 TYK2-210ENST00000529370 3176 ntTSL 2 BASIC14.99□□□□□ -0.01
RFWD3Q6PCD5 FAM160A2-202ENST00000449352 3354 ntAPPRIS ALT1 TSL 1 (best) BASIC14.99□□□□□ -0.01
RFWD3Q6PCD5 DCUN1D3-201ENST00000324344 6162 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
RFWD3Q6PCD5 USP33-202ENST00000370792 2917 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
RFWD3Q6PCD5 SELENON-203ENST00000374315 4212 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
RFWD3Q6PCD5 PAK1IP1-201ENST00000379568 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
RFWD3Q6PCD5 NFE2L2-202ENST00000397063 2651 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
RFWD3Q6PCD5 ARHGAP36-201ENST00000276211 3083 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
RFWD3Q6PCD5 GTF2IRD1-202ENST00000424337 3077 ntAPPRIS ALT1 TSL 1 (best) BASIC14.98□□□□□ -0.01
RFWD3Q6PCD5 MAU2-201ENST00000262815 4994 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
RFWD3Q6PCD5 CTXND1-201ENST00000560778 6890 ntAPPRIS P1 TSL 3 BASIC14.98□□□□□ -0.01
RFWD3Q6PCD5 KCP-203ENST00000610776 5108 ntTSL 5 BASIC14.98□□□□□ -0.01
RFWD3Q6PCD5 RPTOR-201ENST00000306801 6408 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
RFWD3Q6PCD5 DLK1-201ENST00000331224 1324 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
RFWD3Q6PCD5 LILRB5-203ENST00000449561 2137 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
RFWD3Q6PCD5 ADAMTS14-202ENST00000373208 5269 ntAPPRIS P4 TSL 2 BASIC14.98□□□□□ -0.01
RFWD3Q6PCD5 ZBED8-202ENST00000523213 2484 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
RFWD3Q6PCD5 TMEM40-201ENST00000264728 984 ntAPPRIS P3 TSL 2 BASIC14.98□□□□□ -0.01
RFWD3Q6PCD5 SYCE2-201ENST00000293695 1231 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
RFWD3Q6PCD5 TMEM254-204ENST00000372277 366 ntTSL 5 BASIC14.98□□□□□ -0.01
RFWD3Q6PCD5 UQCRQ-203ENST00000378670 839 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
RFWD3Q6PCD5 AC093484.1-201ENST00000441875 477 ntTSL 5 BASIC14.98□□□□□ -0.01
RFWD3Q6PCD5 ST13P19-201ENST00000442505 1124 ntBASIC14.98□□□□□ -0.01
RFWD3Q6PCD5 ZNF529-AS1-201ENST00000448373 1004 ntTSL 2 BASIC14.98□□□□□ -0.01
RFWD3Q6PCD5 TPT1P11-201ENST00000458482 498 ntBASIC14.98□□□□□ -0.01
RFWD3Q6PCD5 CENPBD1P1-203ENST00000479047 569 ntTSL 3 BASIC14.98□□□□□ -0.01
RFWD3Q6PCD5 CHMP2B-205ENST00000494980 1175 ntTSL 3 BASIC14.98□□□□□ -0.01
RFWD3Q6PCD5 AC024681.1-201ENST00000521917 487 ntBASIC14.98□□□□□ -0.01
RFWD3Q6PCD5 RERG-205ENST00000537647 935 ntTSL 2 BASIC14.98□□□□□ -0.01
RFWD3Q6PCD5 PGAM1P5-201ENST00000548011 764 ntBASIC14.98□□□□□ -0.01
RFWD3Q6PCD5 AL132709.1-203ENST00000555103 569 ntTSL 4 BASIC14.98□□□□□ -0.01
RFWD3Q6PCD5 LINC02205-201ENST00000559752 239 ntTSL 5 BASIC14.98□□□□□ -0.01
RFWD3Q6PCD5 AC063977.3-201ENST00000597569 547 ntTSL 4 BASIC14.98□□□□□ -0.01
RFWD3Q6PCD5 HIST1H4A-201ENST00000617569 312 ntAPPRIS P1 BASIC14.98□□□□□ -0.01
RFWD3Q6PCD5 SFTA2-203ENST00000634371 815 ntTSL 5 BASIC14.98□□□□□ -0.01
RFWD3Q6PCD5 TMEM237-202ENST00000409444 5592 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
RFWD3Q6PCD5 MLXIPL-204ENST00000414749 3224 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
RFWD3Q6PCD5 C3orf33-205ENST00000534941 1804 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
RFWD3Q6PCD5 INVS-201ENST00000262456 2968 ntTSL 5 BASIC14.98□□□□□ -0.01
RFWD3Q6PCD5 SWAP70-201ENST00000318950 4882 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
RFWD3Q6PCD5 GDPD2-204ENST00000536730 2171 ntTSL 2 BASIC14.98□□□□□ -0.01
RFWD3Q6PCD5 CACNA2D1-201ENST00000356253 3858 ntTSL 5 BASIC14.98□□□□□ -0.01
RFWD3Q6PCD5 POLRMT-202ENST00000588649 3835 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
RFWD3Q6PCD5 DAGLB-201ENST00000297056 2897 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
RFWD3Q6PCD5 PDE8A-201ENST00000310298 3984 ntAPPRIS P4 TSL 1 (best) BASIC14.98□□□□□ -0.01
RFWD3Q6PCD5 GRIN1-206ENST00000371559 3577 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
RFWD3Q6PCD5 AGER-201ENST00000375055 1369 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
RFWD3Q6PCD5 ABAT-203ENST00000425191 1923 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
RFWD3Q6PCD5 CDCA3-207ENST00000538862 1943 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
RFWD3Q6PCD5 AC130686.1-201ENST00000622936 2466 ntBASIC14.98□□□□□ -0.01
RFWD3Q6PCD5 ZNF664-202ENST00000392404 4262 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
RFWD3Q6PCD5 PSG4-203ENST00000433626 1887 ntTSL 2 BASIC14.97□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 123.3 ms