Protein–RNA interactions for Protein: P60507

ERVFC1, Endogenous retrovirus group FC1 Env polyprotein, humanhuman

Predictions only

Length 584 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERVFC1P60507 NAV1-210ENST00000593583 726 ntBASIC14.9□□□□□ -0.02
ERVFC1P60507 AL031673.1-201ENST00000611460 466 ntBASIC14.9□□□□□ -0.02
ERVFC1P60507 Metazoa_SRP.144-201ENST00000617007 311 ntBASIC14.9□□□□□ -0.02
ERVFC1P60507 ANKRD36C-208ENST00000619511 737 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
ERVFC1P60507 OSMR-AS1-204ENST00000636516 850 ntTSL 5 BASIC14.9□□□□□ -0.02
ERVFC1P60507 ACBD5-202ENST00000375897 4173 ntAPPRIS ALT2 TSL 2 BASIC14.9□□□□□ -0.02
ERVFC1P60507 AC006262.1-203ENST00000598170 1634 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
ERVFC1P60507 C8orf49-201ENST00000525043 1968 ntBASIC14.9□□□□□ -0.02
ERVFC1P60507 BCL11A-203ENST00000358510 2697 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
ERVFC1P60507 ZNF367-201ENST00000375256 3646 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
ERVFC1P60507 MGEA5-201ENST00000357797 3263 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
ERVFC1P60507 COQ4-201ENST00000300452 1548 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
ERVFC1P60507 RASGRF1-203ENST00000558480 6237 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
ERVFC1P60507 KIF5B-201ENST00000302418 5877 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
ERVFC1P60507 GRAMD4-203ENST00000408031 2834 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
ERVFC1P60507 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC14.9□□□□□ -0.02
ERVFC1P60507 SH2B1-201ENST00000322610 3095 ntTSL 2 BASIC14.9□□□□□ -0.02
ERVFC1P60507 SIGLEC7-202ENST00000317643 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
ERVFC1P60507 WDR46-231ENST00000374617 2358 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
ERVFC1P60507 RNF34-211ENST00000613529 1449 ntTSL 2 BASIC14.9□□□□□ -0.02
ERVFC1P60507 TRMT10B-202ENST00000377753 2027 ntTSL 2 BASIC14.9□□□□□ -0.02
ERVFC1P60507 OR2V1-205ENST00000642036 2609 ntAPPRIS P1 BASIC14.9□□□□□ -0.02
ERVFC1P60507 RFX8-201ENST00000428343 1686 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
ERVFC1P60507 GALNT16-202ENST00000448469 2270 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
ERVFC1P60507 AC005885.1-204ENST00000637885 2885 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
ERVFC1P60507 GGT6-201ENST00000301395 2534 ntTSL 2 BASIC14.9□□□□□ -0.02
ERVFC1P60507 ABHD16A-202ENST00000440843 1906 ntTSL 2 BASIC14.9□□□□□ -0.02
ERVFC1P60507 FBXO16-202ENST00000380254 1343 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
ERVFC1P60507 SHMT1P1-201ENST00000419974 1312 ntBASIC14.9□□□□□ -0.02
ERVFC1P60507 DDX49-201ENST00000247003 1830 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
ERVFC1P60507 SIN3B-202ENST00000379803 5129 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
ERVFC1P60507 LINC02395-201ENST00000546821 3157 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
ERVFC1P60507 CC2D1B-202ENST00000371586 5642 ntAPPRIS P3 TSL 5 BASIC14.89□□□□□ -0.03
ERVFC1P60507 AC004554.1-201ENST00000422830 1468 ntBASIC14.89□□□□□ -0.03
ERVFC1P60507 PES1-201ENST00000335214 1988 ntAPPRIS ALT1 TSL 1 (best) BASIC14.89□□□□□ -0.03
ERVFC1P60507 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
ERVFC1P60507 GUCD1-204ENST00000407471 3482 ntAPPRIS P3 TSL 5 BASIC14.89□□□□□ -0.03
ERVFC1P60507 NCF4-201ENST00000248899 1396 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
ERVFC1P60507 COX10-201ENST00000261643 2873 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
ERVFC1P60507 AC060234.2-201ENST00000428825 1610 ntTSL 5 BASIC14.89□□□□□ -0.03
ERVFC1P60507 FKBP4P8-201ENST00000610931 1369 ntBASIC14.89□□□□□ -0.03
ERVFC1P60507 ARHGEF6-202ENST00000370620 4764 ntTSL 2 BASIC14.89□□□□□ -0.03
ERVFC1P60507 PPT2-245ENST00000361568 1759 ntAPPRIS P4 TSL 1 (best) BASIC14.89□□□□□ -0.03
ERVFC1P60507 HPSE2-206ENST00000628193 1760 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
ERVFC1P60507 AMZ2P1-202ENST00000430983 3425 ntTSL 2 BASIC14.89□□□□□ -0.03
ERVFC1P60507 PCLAF-202ENST00000380258 911 ntTSL 2 BASIC14.89□□□□□ -0.03
ERVFC1P60507 AC073210.1-201ENST00000414799 232 ntBASIC14.89□□□□□ -0.03
ERVFC1P60507 AP000244.1-201ENST00000424582 201 ntBASIC14.89□□□□□ -0.03
ERVFC1P60507 LRRC3-AS1-201ENST00000426578 784 ntTSL 3 BASIC14.89□□□□□ -0.03
ERVFC1P60507 FAM3D-AS1-201ENST00000464125 821 ntTSL 3 BASIC14.89□□□□□ -0.03
ERVFC1P60507 TMEM14B-208ENST00000467317 1224 ntTSL 2 BASIC14.89□□□□□ -0.03
ERVFC1P60507 AL928742.1-201ENST00000497397 548 ntTSL 4 BASIC14.89□□□□□ -0.03
ERVFC1P60507 GOLGA2P8-201ENST00000505201 779 ntBASIC14.89□□□□□ -0.03
ERVFC1P60507 AC022447.6-201ENST00000515522 438 ntBASIC14.89□□□□□ -0.03
ERVFC1P60507 AC026310.2-201ENST00000546353 728 ntTSL 4 BASIC14.89□□□□□ -0.03
ERVFC1P60507 AC023968.2-201ENST00000560593 1049 ntBASIC14.89□□□□□ -0.03
ERVFC1P60507 AC074050.2-201ENST00000563338 538 ntTSL 3 BASIC14.89□□□□□ -0.03
ERVFC1P60507 NAA38-205ENST00000575771 852 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
ERVFC1P60507 AC005498.2-204ENST00000590613 413 ntTSL 3 BASIC14.89□□□□□ -0.03
ERVFC1P60507 TUBB6-214ENST00000592683 481 ntTSL 4 BASIC14.89□□□□□ -0.03
ERVFC1P60507 AC017033.1-201ENST00000603720 708 ntTSL 2 BASIC14.89□□□□□ -0.03
ERVFC1P60507 AL136982.5-201ENST00000605222 294 ntBASIC14.89□□□□□ -0.03
ERVFC1P60507 AL627230.2-201ENST00000613254 655 ntBASIC14.89□□□□□ -0.03
ERVFC1P60507 MME-218ENST00000625667 363 ntTSL 5 BASIC14.89□□□□□ -0.03
ERVFC1P60507 LINC01002-234ENST00000633808 848 ntTSL 5 BASIC14.89□□□□□ -0.03
ERVFC1P60507 LINC00910-206ENST00000592135 2438 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
ERVFC1P60507 CLDN22-201ENST00000323319 2581 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
ERVFC1P60507 MPHOSPH10-205ENST00000498451 2068 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
ERVFC1P60507 CICP14-201ENST00000629111 2732 ntBASIC14.89□□□□□ -0.03
ERVFC1P60507 SPATA20-201ENST00000006658 2719 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
ERVFC1P60507 PCK2-208ENST00000559250 1804 ntTSL 5 BASIC14.89□□□□□ -0.03
ERVFC1P60507 ERLIN2-205ENST00000518586 2623 ntTSL 2 BASIC14.89□□□□□ -0.03
ERVFC1P60507 ALDOA-209ENST00000563060 1550 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
ERVFC1P60507 SYBU-206ENST00000424158 3007 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
ERVFC1P60507 KCNC2-207ENST00000548513 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
ERVFC1P60507 XKR5-201ENST00000618742 4893 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
ERVFC1P60507 EYA4-205ENST00000430974 2364 ntTSL 2 BASIC14.89□□□□□ -0.03
ERVFC1P60507 ACVR1B-206ENST00000542485 2362 ntTSL 2 BASIC14.89□□□□□ -0.03
ERVFC1P60507 SLC22A7-203ENST00000372589 2549 ntAPPRIS ALT2 TSL 2 BASIC14.89□□□□□ -0.03
ERVFC1P60507 CEP76-201ENST00000262127 2939 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
ERVFC1P60507 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
ERVFC1P60507 AC073324.2-201ENST00000626532 2941 ntTSL 4 BASIC14.89□□□□□ -0.03
ERVFC1P60507 BICDL1-201ENST00000397558 3055 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
ERVFC1P60507 AC007728.2-201ENST00000563315 2296 ntTSL 5 BASIC14.89□□□□□ -0.03
ERVFC1P60507 MAP7D1-203ENST00000373150 3238 ntAPPRIS ALT2 TSL 2 BASIC14.88□□□□□ -0.03
ERVFC1P60507 NOMO2-203ENST00000543392 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
ERVFC1P60507 PRRT2-202ENST00000358758 2567 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
ERVFC1P60507 CALD1-222ENST00000495522 2199 ntTSL 5 BASIC14.88□□□□□ -0.03
ERVFC1P60507 UBR3-201ENST00000272793 8005 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
ERVFC1P60507 CLCN2-201ENST00000265593 3290 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
ERVFC1P60507 KIAA2026-202ENST00000399933 6988 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
ERVFC1P60507 FES-204ENST00000414248 2327 ntTSL 2 BASIC14.88□□□□□ -0.03
ERVFC1P60507 GPAT2-204ENST00000453542 2466 ntTSL 2 BASIC14.88□□□□□ -0.03
ERVFC1P60507 ATL3-203ENST00000538786 1920 ntAPPRIS ALT2 TSL 2 BASIC14.88□□□□□ -0.03
ERVFC1P60507 STUM-201ENST00000366788 7705 ntAPPRIS P2 TSL 5 BASIC14.88□□□□□ -0.03
ERVFC1P60507 ELMSAN1-202ENST00000394071 7721 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
ERVFC1P60507 MLLT10-203ENST00000377072 5126 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
ERVFC1P60507 IMMT-212ENST00000620815 1520 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
ERVFC1P60507 SLC35C2-204ENST00000372230 2246 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
ERVFC1P60507 ZNF7-207ENST00000528372 2905 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 45.7 ms