Protein–RNA interactions for Protein: P59780

AP3S2, AP-3 complex subunit sigma-2, humanhuman

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S2P59780 CXCR5-201ENST00000292174 4431 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
AP3S2P59780 TMEM229B-207ENST00000557006 3941 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
AP3S2P59780 ATXN2L-225ENST00000570200 3635 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
AP3S2P59780 NUTM2E-202ENST00000602967 3623 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
AP3S2P59780 RS1-201ENST00000379984 2810 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
AP3S2P59780 PTCHD3-201ENST00000438700 2529 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
AP3S2P59780 AC015921.1-201ENST00000574885 2546 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
AP3S2P59780 TMBIM1-202ENST00000396809 2422 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
AP3S2P59780 TBC1D3L-201ENST00000612727 2148 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
AP3S2P59780 MOV10L1-202ENST00000354853 1701 ntTSL 2 BASIC12.37□□□□□ -0.43
AP3S2P59780 RHD-206ENST00000423810 1637 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
AP3S2P59780 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC12.37□□□□□ -0.43
AP3S2P59780 AC006974.1-201ENST00000637928 1501 ntTSL 5 BASIC12.37□□□□□ -0.43
AP3S2P59780 HNRNPDL-207ENST00000614627 3968 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
AP3S2P59780 ITGB2-201ENST00000302347 2955 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
AP3S2P59780 PLAT-203ENST00000429089 2599 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
AP3S2P59780 LOXHD1-203ENST00000398686 1958 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
AP3S2P59780 LINC02486-201ENST00000604157 3000 ntBASIC12.36□□□□□ -0.43
AP3S2P59780 ZNF792-201ENST00000404801 3888 ntAPPRIS P1 TSL 2 BASIC12.36□□□□□ -0.43
AP3S2P59780 DNAJC3-202ENST00000602402 5591 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
AP3S2P59780 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
AP3S2P59780 GPBAR1-203ENST00000521462 1465 ntAPPRIS P1 TSL 2 BASIC12.36□□□□□ -0.43
AP3S2P59780 FOSB-213ENST00000615753 1468 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
AP3S2P59780 PLEKHG2-203ENST00000425673 8132 ntAPPRIS P2 TSL 2 BASIC12.36□□□□□ -0.43
AP3S2P59780 SEC13-201ENST00000337354 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC12.36□□□□□ -0.43
AP3S2P59780 MSTO1-202ENST00000368341 2245 ntTSL 2 BASIC12.36□□□□□ -0.43
AP3S2P59780 YWHAQ-202ENST00000381844 2216 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
AP3S2P59780 ALPL-206ENST00000539907 2241 ntTSL 2 BASIC12.36□□□□□ -0.43
AP3S2P59780 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
AP3S2P59780 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC12.36□□□□□ -0.43
AP3S2P59780 FIBP-201ENST00000338369 1261 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
AP3S2P59780 BRF1-202ENST00000379932 884 ntTSL 5 BASIC12.36□□□□□ -0.43
AP3S2P59780 ALPP-201ENST00000392027 2971 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
AP3S2P59780 LSM5-207ENST00000410044 687 ntTSL 3 BASIC12.36□□□□□ -0.43
AP3S2P59780 PAX7-203ENST00000420770 5538 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
AP3S2P59780 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC12.36□□□□□ -0.43
AP3S2P59780 PRAP1-201ENST00000433452 971 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
AP3S2P59780 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC12.36□□□□□ -0.43
AP3S2P59780 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC12.36□□□□□ -0.43
AP3S2P59780 SLBP-205ENST00000488267 987 ntTSL 2 BASIC12.36□□□□□ -0.43
AP3S2P59780 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
AP3S2P59780 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC12.36□□□□□ -0.43
AP3S2P59780 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC12.36□□□□□ -0.43
AP3S2P59780 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC12.36□□□□□ -0.43
AP3S2P59780 AL691432.3-201ENST00000621860 400 ntBASIC12.36□□□□□ -0.43
AP3S2P59780 WDR45-230ENST00000634559 1192 ntTSL 5 BASIC12.36□□□□□ -0.43
AP3S2P59780 AL109936.8-201ENST00000641772 604 ntBASIC12.36□□□□□ -0.43
AP3S2P59780 CD3EAP-202ENST00000589804 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
AP3S2P59780 CHD4-211ENST00000544484 6554 ntTSL 2 BASIC12.36□□□□□ -0.43
AP3S2P59780 VSTM4-202ENST00000332853 6392 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
AP3S2P59780 TMC5-204ENST00000541464 3581 ntTSL 2 BASIC12.36□□□□□ -0.43
AP3S2P59780 PI4KAP2-201ENST00000360806 2080 ntBASIC12.36□□□□□ -0.43
AP3S2P59780 CEP78-205ENST00000424347 11198 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
AP3S2P59780 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC12.36□□□□□ -0.43
AP3S2P59780 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
AP3S2P59780 NAV1-203ENST00000367302 9685 ntTSL 5 BASIC12.36□□□□□ -0.43
AP3S2P59780 DAPK1-201ENST00000358077 5743 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
AP3S2P59780 DNAJB13-201ENST00000339764 1875 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
AP3S2P59780 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
AP3S2P59780 MYO18B-202ENST00000407587 8090 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
AP3S2P59780 ANKRD36B-201ENST00000258459 5986 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
AP3S2P59780 OPN4-201ENST00000241891 2308 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
AP3S2P59780 C5AR1-201ENST00000355085 2311 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
AP3S2P59780 SDR9C7-201ENST00000293502 1765 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
AP3S2P59780 AL358216.1-201ENST00000451601 1657 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
AP3S2P59780 STARD13-202ENST00000336934 5917 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
AP3S2P59780 MARK2-205ENST00000408948 2112 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
AP3S2P59780 MAGED4-201ENST00000375626 2495 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
AP3S2P59780 ADAMTSL1-204ENST00000380545 1562 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
AP3S2P59780 ENOX2-204ENST00000394363 4174 ntAPPRIS P1 TSL 2 BASIC12.35□□□□□ -0.43
AP3S2P59780 CYB5A-202ENST00000340533 3283 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
AP3S2P59780 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC12.35□□□□□ -0.43
AP3S2P59780 TGFBRAP1-203ENST00000595531 5595 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
AP3S2P59780 KCTD9-201ENST00000221200 3401 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
AP3S2P59780 NLRP2-204ENST00000391721 3420 ntAPPRIS ALT2 TSL 2 BASIC12.35□□□□□ -0.43
AP3S2P59780 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
AP3S2P59780 AHI1-205ENST00000457866 5549 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
AP3S2P59780 AC106818.1-201ENST00000623223 3242 ntBASIC12.35□□□□□ -0.43
AP3S2P59780 C10orf105-201ENST00000398786 4730 ntAPPRIS P1 TSL 2 BASIC12.35□□□□□ -0.43
AP3S2P59780 C5orf56-206ENST00000612967 2791 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
AP3S2P59780 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC12.35□□□□□ -0.43
AP3S2P59780 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC12.35□□□□□ -0.43
AP3S2P59780 MAP2K4-201ENST00000353533 3826 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
AP3S2P59780 RBPMS2P1-201ENST00000437762 623 ntBASIC12.35□□□□□ -0.43
AP3S2P59780 C14orf178-202ENST00000439131 632 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
AP3S2P59780 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC12.35□□□□□ -0.43
AP3S2P59780 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
AP3S2P59780 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC12.35□□□□□ -0.43
AP3S2P59780 AC026410.3-201ENST00000514280 936 ntBASIC12.35□□□□□ -0.43
AP3S2P59780 MANEAL-204ENST00000525897 1294 ntTSL 2 BASIC12.35□□□□□ -0.43
AP3S2P59780 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC12.35□□□□□ -0.43
AP3S2P59780 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC12.35□□□□□ -0.43
AP3S2P59780 AC027237.1-201ENST00000560942 655 ntBASIC12.35□□□□□ -0.43
AP3S2P59780 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC12.35□□□□□ -0.43
AP3S2P59780 JPT2-214ENST00000569765 782 ntTSL 2 BASIC12.35□□□□□ -0.43
AP3S2P59780 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC12.35□□□□□ -0.43
AP3S2P59780 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
AP3S2P59780 AC093813.1-201ENST00000605066 256 ntBASIC12.35□□□□□ -0.43
AP3S2P59780 AC104506.1-201ENST00000609247 429 ntBASIC12.35□□□□□ -0.43
AP3S2P59780 PAX4-207ENST00000611453 1235 ntTSL 5 BASIC12.35□□□□□ -0.43
Retrieved 100 of 98,524 protein–RNA pairs in 34 ms