Protein–RNA interactions for Protein: P40198

CEACAM3, Carcinoembryonic antigen-related cell adhesion molecule 3, humanhuman

Predictions only

Length 252 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CEACAM3P40198 MRPS25-203ENST00000444840 1281 ntTSL 2 BASIC11.78□□□□□ -0.52
CEACAM3P40198 ZNF789-204ENST00000448667 1055 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
CEACAM3P40198 AP000696.1-201ENST00000457669 1133 ntTSL 3 BASIC11.78□□□□□ -0.52
CEACAM3P40198 PRSS30P-202ENST00000475030 752 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
CEACAM3P40198 AC006122.1-201ENST00000493323 440 ntBASIC11.78□□□□□ -0.52
CEACAM3P40198 PRSS30P-205ENST00000506153 699 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
CEACAM3P40198 MRPL36-204ENST00000508987 686 ntAPPRIS P1 TSL 2 BASIC11.78□□□□□ -0.52
CEACAM3P40198 AP002387.1-201ENST00000529369 680 ntTSL 2 BASIC11.78□□□□□ -0.52
CEACAM3P40198 AC084859.1-201ENST00000533002 670 ntTSL 4 BASIC11.78□□□□□ -0.52
CEACAM3P40198 PLEKHB1-206ENST00000535129 1049 ntAPPRIS ALT1 TSL 2 BASIC11.78□□□□□ -0.52
CEACAM3P40198 ADIG-204ENST00000537425 770 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
CEACAM3P40198 PPP1R32-205ENST00000538185 1107 ntTSL 2 BASIC11.78□□□□□ -0.52
CEACAM3P40198 AL160314.3-201ENST00000556041 767 ntBASIC11.78□□□□□ -0.52
CEACAM3P40198 AP003096.1-203ENST00000564469 563 ntTSL 3 BASIC11.78□□□□□ -0.52
CEACAM3P40198 AC005730.2-201ENST00000564549 1184 ntBASIC11.78□□□□□ -0.52
CEACAM3P40198 CRISPLD2-210ENST00000569090 808 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
CEACAM3P40198 MUC1-226ENST00000614519 1093 ntTSL 2 BASIC11.78□□□□□ -0.52
CEACAM3P40198 TTC28-AS1_3.1-201ENST00000615579 181 ntBASIC11.78□□□□□ -0.52
CEACAM3P40198 AL008638.5-201ENST00000623814 1298 ntBASIC11.78□□□□□ -0.52
CEACAM3P40198 LINC01672-205ENST00000635092 633 ntTSL 5 BASIC11.78□□□□□ -0.52
CEACAM3P40198 LINC00595-217ENST00000635545 549 ntTSL 4 BASIC11.78□□□□□ -0.52
CEACAM3P40198 AC114737.3-201ENST00000636708 570 ntTSL 4 BASIC11.78□□□□□ -0.52
CEACAM3P40198 VCP-201ENST00000358901 4370 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
CEACAM3P40198 PRRT2-202ENST00000358758 2567 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
CEACAM3P40198 SPDYE16-203ENST00000633306 2591 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
CEACAM3P40198 SCAF4-202ENST00000399804 4127 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
CEACAM3P40198 AP4M1-201ENST00000359593 1817 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
CEACAM3P40198 AP4M1-206ENST00000429084 1836 ntTSL 5 BASIC11.78□□□□□ -0.52
CEACAM3P40198 SCYL1-201ENST00000270176 2642 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
CEACAM3P40198 NICN1-201ENST00000273598 2616 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
CEACAM3P40198 ADAMTSL1-204ENST00000380545 1562 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
CEACAM3P40198 GSE1-202ENST00000393243 7140 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
CEACAM3P40198 DLK1-201ENST00000331224 1324 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
CEACAM3P40198 SPIN2A-201ENST00000374906 1319 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
CEACAM3P40198 FGFR3-203ENST00000352904 3733 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
CEACAM3P40198 CXCL12-201ENST00000343575 1857 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
CEACAM3P40198 GOLGA8S-201ENST00000562295 1878 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
CEACAM3P40198 NSD2-204ENST00000382891 7534 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
CEACAM3P40198 GDI2-203ENST00000380191 2412 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
CEACAM3P40198 MYNN-201ENST00000349841 4999 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
CEACAM3P40198 NXF1-213ENST00000532297 2795 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
CEACAM3P40198 CLASRP-204ENST00000544944 2769 ntAPPRIS ALT2 TSL 2 BASIC11.78□□□□□ -0.52
CEACAM3P40198 PAIP2-202ENST00000394795 2297 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
CEACAM3P40198 E2F7-201ENST00000322886 5740 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
CEACAM3P40198 HLA-DPA1-242ENST00000419277 1704 ntAPPRIS P2 BASIC11.77□□□□□ -0.52
CEACAM3P40198 PRKAR1A-203ENST00000392711 4327 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.52
CEACAM3P40198 LINC00299-202ENST00000442956 2342 ntTSL 2 BASIC11.77□□□□□ -0.52
CEACAM3P40198 UBE3A-228ENST00000638155 9131 ntAPPRIS P3 TSL 5 BASIC11.77□□□□□ -0.52
CEACAM3P40198 USP4-203ENST00000415188 1454 ntTSL 3 BASIC11.77□□□□□ -0.52
CEACAM3P40198 LAP3P2-201ENST00000454686 1454 ntBASIC11.77□□□□□ -0.52
CEACAM3P40198 RMND1-205ENST00000622845 1484 ntTSL 5 BASIC11.77□□□□□ -0.52
CEACAM3P40198 LINC01671-201ENST00000419628 1775 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
CEACAM3P40198 SYBU-204ENST00000408908 2983 ntAPPRIS ALT2 TSL 5 BASIC11.77□□□□□ -0.52
CEACAM3P40198 TRIM45-202ENST00000369461 2415 ntTSL 5 BASIC11.77□□□□□ -0.52
CEACAM3P40198 FES-203ENST00000394302 2133 ntTSL 5 BASIC11.77□□□□□ -0.52
CEACAM3P40198 CDKN1A-208ENST00000615513 2102 ntAPPRIS P1 TSL 2 BASIC11.77□□□□□ -0.52
CEACAM3P40198 AKR1A1-202ENST00000372070 1818 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
CEACAM3P40198 NXPH3-202ENST00000513748 1530 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
CEACAM3P40198 AP3M2-201ENST00000174653 3661 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.53
CEACAM3P40198 RNF222-202ENST00000399398 3062 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.53
CEACAM3P40198 MAPK4-206ENST00000592595 4330 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
CEACAM3P40198 DEF8-219ENST00000567874 1554 ntTSL 2 BASIC11.77□□□□□ -0.53
CEACAM3P40198 CACNA1G-232ENST00000515411 6960 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
CEACAM3P40198 CACNA1G-233ENST00000515765 6981 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
CEACAM3P40198 ARHGAP45-206ENST00000586866 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
CEACAM3P40198 GNPNAT1-203ENST00000554230 2238 ntTSL 5 BASIC11.77□□□□□ -0.53
CEACAM3P40198 RAB40AL-201ENST00000218249 1029 ntAPPRIS P1 BASIC11.77□□□□□ -0.53
CEACAM3P40198 IER3-201ENST00000259874 1244 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
CEACAM3P40198 LSM10-201ENST00000315732 850 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
CEACAM3P40198 PAX4-201ENST00000338516 1085 ntAPPRIS ALT2 TSL 5 BASIC11.77□□□□□ -0.53
CEACAM3P40198 C1orf53-201ENST00000367393 588 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
CEACAM3P40198 TREML1-201ENST00000373127 1194 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
CEACAM3P40198 MOGAT3-202ENST00000379423 933 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
CEACAM3P40198 IFITM3-201ENST00000399808 808 ntAPPRIS P2 TSL 1 (best) BASIC11.77□□□□□ -0.53
CEACAM3P40198 MIR1908-201ENST00000410394 80 ntBASIC11.77□□□□□ -0.53
CEACAM3P40198 Z94721.1-201ENST00000444102 385 ntTSL 5 BASIC11.77□□□□□ -0.53
CEACAM3P40198 PGAP2-209ENST00000464261 830 ntTSL 3 BASIC11.77□□□□□ -0.53
CEACAM3P40198 RPL18P13-201ENST00000478088 569 ntBASIC11.77□□□□□ -0.53
CEACAM3P40198 AC009487.3-201ENST00000505579 560 ntTSL 4 BASIC11.77□□□□□ -0.53
CEACAM3P40198 AC092658.1-201ENST00000505836 891 ntBASIC11.77□□□□□ -0.53
CEACAM3P40198 ROPN1B-210ENST00000514116 1088 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
CEACAM3P40198 FBXL8-208ENST00000521920 574 ntTSL 4 BASIC11.77□□□□□ -0.53
CEACAM3P40198 AP001258.2-201ENST00000529891 490 ntBASIC11.77□□□□□ -0.53
CEACAM3P40198 FAM167A-AS1-202ENST00000533578 1222 ntTSL 2 BASIC11.77□□□□□ -0.53
CEACAM3P40198 LINC02332-201ENST00000557232 386 ntTSL 3 BASIC11.77□□□□□ -0.53
CEACAM3P40198 EMC4-203ENST00000557879 1009 ntTSL 3 BASIC11.77□□□□□ -0.53
CEACAM3P40198 EID1-202ENST00000560490 584 ntTSL 3 BASIC11.77□□□□□ -0.53
CEACAM3P40198 AC124068.2-202ENST00000562356 612 ntTSL 3 BASIC11.77□□□□□ -0.53
CEACAM3P40198 AC013355.1-201ENST00000562625 723 ntBASIC11.77□□□□□ -0.53
CEACAM3P40198 AC120498.3-201ENST00000568884 542 ntTSL 4 BASIC11.77□□□□□ -0.53
CEACAM3P40198 AC124068.2-201ENST00000569473 1109 ntBASIC11.77□□□□□ -0.53
CEACAM3P40198 C19orf70-204ENST00000587950 655 ntTSL 2 BASIC11.77□□□□□ -0.53
CEACAM3P40198 LINC00479-204ENST00000589300 718 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
CEACAM3P40198 NKG7-204ENST00000595217 816 ntTSL 2 BASIC11.77□□□□□ -0.53
CEACAM3P40198 AL118558.3-201ENST00000607414 1079 ntBASIC11.77□□□□□ -0.53
CEACAM3P40198 AC090164.2-201ENST00000611487 516 ntBASIC11.77□□□□□ -0.53
CEACAM3P40198 CHD1L-211ENST00000639534 1144 ntTSL 5 BASIC11.77□□□□□ -0.53
CEACAM3P40198 IMPDH1-203ENST00000354269 2580 ntTSL 2 BASIC11.77□□□□□ -0.53
CEACAM3P40198 NFATC2-202ENST00000396009 7437 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.53
CEACAM3P40198 FGGY-203ENST00000371212 1640 ntTSL 2 BASIC11.77□□□□□ -0.53
Retrieved 100 of 98,524 protein–RNA pairs in 54.9 ms