Protein–RNA interactions for Protein: P35606

COPB2, Coatomer subunit beta', humanhuman

Predictions only

Length 906 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPB2P35606 AC019118.2-201ENST00000425776 718 ntTSL 5 BASIC16.33■□□□□ 0.2
COPB2P35606 RPL35P9-201ENST00000446059 350 ntBASIC16.33■□□□□ 0.2
COPB2P35606 AC006455.8-201ENST00000451381 351 ntTSL 3 BASIC16.33■□□□□ 0.2
COPB2P35606 NCK1-AS1-203ENST00000474250 827 ntTSL 2 BASIC16.33■□□□□ 0.2
COPB2P35606 ALG1L6P-201ENST00000515248 758 ntBASIC16.33■□□□□ 0.2
COPB2P35606 NEU3-207ENST00000534628 746 ntTSL 2 BASIC16.33■□□□□ 0.2
COPB2P35606 CRTC3-AS1-202ENST00000559531 657 ntTSL 3 BASIC16.33■□□□□ 0.2
COPB2P35606 AC145285.5-201ENST00000562217 361 ntBASIC16.33■□□□□ 0.2
COPB2P35606 AC145207.8-201ENST00000580897 563 ntTSL 4 BASIC16.33■□□□□ 0.2
COPB2P35606 RN7SL357P-201ENST00000581065 298 ntBASIC16.33■□□□□ 0.2
COPB2P35606 LINC01746-201ENST00000621390 449 ntTSL 3 BASIC16.33■□□□□ 0.2
COPB2P35606 CAMK1D-204ENST00000619168 8153 ntAPPRIS P4 TSL 1 (best) BASIC16.33■□□□□ 0.2
COPB2P35606 LIPE-AS1-204ENST00000594624 1448 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
COPB2P35606 IMPDH1-201ENST00000338791 2881 ntTSL 2 BASIC16.33■□□□□ 0.2
COPB2P35606 IMPDH1-217ENST00000626419 2862 ntAPPRIS ALT1 TSL 5 BASIC16.33■□□□□ 0.2
COPB2P35606 PCDHA3-202ENST00000532566 4594 ntBASIC16.33■□□□□ 0.2
COPB2P35606 ARHGAP4-202ENST00000370016 3095 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
COPB2P35606 ALDOA-209ENST00000563060 1550 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
COPB2P35606 ORC6-201ENST00000219097 1628 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
COPB2P35606 LAIR1-209ENST00000434277 1645 ntAPPRIS ALT2 TSL 2 BASIC16.33■□□□□ 0.2
COPB2P35606 BEND6-203ENST00000370748 3497 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
COPB2P35606 ARMCX6-208ENST00000539247 1928 ntAPPRIS P1 TSL 4 BASIC16.33■□□□□ 0.2
COPB2P35606 ZNF79-202ENST00000543471 2194 ntTSL 2 BASIC16.33■□□□□ 0.2
COPB2P35606 ZNF79-203ENST00000612342 2192 ntTSL 2 BASIC16.33■□□□□ 0.2
COPB2P35606 ARHGEF28-202ENST00000296799 4424 ntAPPRIS ALT2 TSL 2 BASIC16.33■□□□□ 0.2
COPB2P35606 WIZ-207ENST00000599910 4609 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
COPB2P35606 FUCA2-201ENST00000002165 2356 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
COPB2P35606 TIGD4-201ENST00000304337 2472 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
COPB2P35606 AC058822.1-201ENST00000507166 2550 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
COPB2P35606 FSIP1-201ENST00000350221 2805 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
COPB2P35606 STAM-202ENST00000377524 2972 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
COPB2P35606 TAF4B-203ENST00000578121 3204 ntAPPRIS ALT2 TSL 2 BASIC16.32■□□□□ 0.2
COPB2P35606 RUNDC1-201ENST00000361677 3828 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
COPB2P35606 ASTN2-206ENST00000361477 4001 ntTSL 5 BASIC16.32■□□□□ 0.2
COPB2P35606 AC126755.1-201ENST00000525846 6405 ntBASIC16.32■□□□□ 0.2
COPB2P35606 ZMIZ2-202ENST00000309315 5144 ntAPPRIS P4 TSL 2 BASIC16.32■□□□□ 0.2
COPB2P35606 YPEL1-201ENST00000339468 4329 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
COPB2P35606 CLCN1-201ENST00000343257 3172 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
COPB2P35606 PVR-202ENST00000344956 3166 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
COPB2P35606 PATZ1-203ENST00000351933 3638 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
COPB2P35606 SLC35E2-202ENST00000355439 2078 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
COPB2P35606 HVCN1-202ENST00000356742 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
COPB2P35606 AL357563.1-201ENST00000404728 395 ntBASIC16.32■□□□□ 0.2
COPB2P35606 LINC00028-201ENST00000435497 587 ntTSL 2 BASIC16.32■□□□□ 0.2
COPB2P35606 AL008733.1-201ENST00000440516 469 ntTSL 3 BASIC16.32■□□□□ 0.2
COPB2P35606 FAM168A-204ENST00000450446 1364 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
COPB2P35606 SOX2-OT-208ENST00000477928 902 ntTSL 2 BASIC16.32■□□□□ 0.2
COPB2P35606 RN7SL23P-201ENST00000484055 275 ntBASIC16.32■□□□□ 0.2
COPB2P35606 CHCHD2P2-201ENST00000503744 321 ntBASIC16.32■□□□□ 0.2
COPB2P35606 SNCB-203ENST00000506696 552 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
COPB2P35606 AC022447.6-201ENST00000515522 438 ntBASIC16.32■□□□□ 0.2
COPB2P35606 AC055854.1-203ENST00000521141 1630 ntTSL 5 BASIC16.32■□□□□ 0.2
COPB2P35606 AC022858.1-201ENST00000521685 685 ntTSL 3 BASIC16.32■□□□□ 0.2
COPB2P35606 C1R-202ENST00000536053 2347 ntTSL 2 BASIC16.32■□□□□ 0.2
COPB2P35606 AC237221.1-201ENST00000561575 1881 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
COPB2P35606 OXA1L-212ENST00000604262 1571 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
COPB2P35606 AL021707.6-201ENST00000609212 491 ntBASIC16.32■□□□□ 0.2
COPB2P35606 TCP10-210ENST00000617120 2182 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
COPB2P35606 KCTD7-206ENST00000639828 5951 ntAPPRIS P3 TSL 2 BASIC16.32■□□□□ 0.2
COPB2P35606 DSE-202ENST00000359564 4037 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
COPB2P35606 CACTIN-203ENST00000429344 3612 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
COPB2P35606 AC018529.2-202ENST00000611482 3087 ntBASIC16.32■□□□□ 0.2
COPB2P35606 PCDHA7-201ENST00000356878 2922 ntAPPRIS ALT2 BASIC16.32■□□□□ 0.2
COPB2P35606 CICP14-201ENST00000629111 2732 ntBASIC16.32■□□□□ 0.2
COPB2P35606 TTC28-AS1-219ENST00000454741 5064 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
COPB2P35606 PPP2R5C-204ENST00000422945 4481 ntTSL 2 BASIC16.31■□□□□ 0.2
COPB2P35606 HYAL1-209ENST00000618175 2225 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
COPB2P35606 BNIP2-201ENST00000267859 6325 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
COPB2P35606 ABHD16A-202ENST00000440843 1906 ntTSL 2 BASIC16.31■□□□□ 0.2
COPB2P35606 DDX49-201ENST00000247003 1830 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
COPB2P35606 GPKOW-201ENST00000156109 1742 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
COPB2P35606 AC010096.1-201ENST00000443897 1709 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
COPB2P35606 FARP1-214ENST00000595437 4926 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
COPB2P35606 TMEM230-202ENST00000342308 1562 ntTSL 2 BASIC16.31■□□□□ 0.2
COPB2P35606 WDR1-203ENST00000382452 3142 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
COPB2P35606 ANKDD1A-202ENST00000395720 1518 ntTSL 5 BASIC16.31■□□□□ 0.2
COPB2P35606 SLCO5A1-201ENST00000260126 9076 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
COPB2P35606 DCTN1-203ENST00000409240 4365 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
COPB2P35606 WASH2P-202ENST00000538033 2800 ntTSL 2 BASIC16.31■□□□□ 0.2
COPB2P35606 CXCL12-205ENST00000395794 1052 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
COPB2P35606 SETD7-203ENST00000406354 1127 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
COPB2P35606 ACTG2-204ENST00000409918 927 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
COPB2P35606 AC011247.2-201ENST00000457097 233 ntTSL 4 BASIC16.31■□□□□ 0.2
COPB2P35606 AC010285.2-201ENST00000510240 569 ntTSL 4 BASIC16.31■□□□□ 0.2
COPB2P35606 PRR7-AS1-204ENST00000514846 543 ntTSL 2 BASIC16.31■□□□□ 0.2
COPB2P35606 SERGEF-208ENST00000528200 1264 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
COPB2P35606 FAM167A-AS1-202ENST00000533578 1222 ntTSL 2 BASIC16.31■□□□□ 0.2
COPB2P35606 AL512310.5-201ENST00000551999 515 ntBASIC16.31■□□□□ 0.2
COPB2P35606 ACTN1-AS1-202ENST00000553961 599 ntTSL 4 BASIC16.31■□□□□ 0.2
COPB2P35606 MAX-218ENST00000557746 571 ntTSL 4 BASIC16.31■□□□□ 0.2
COPB2P35606 AC068867.1-201ENST00000559855 150 ntBASIC16.31■□□□□ 0.2
COPB2P35606 MIR4472-1-201ENST00000584349 80 ntBASIC16.31■□□□□ 0.2
COPB2P35606 AC025048.2-201ENST00000590744 786 ntTSL 2 BASIC16.31■□□□□ 0.2
COPB2P35606 AC079336.5-201ENST00000581360 2480 ntTSL 2 BASIC16.31■□□□□ 0.2
COPB2P35606 MKS1-202ENST00000393119 2397 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
COPB2P35606 GOLGA8DP-202ENST00000341390 2184 ntBASIC16.31■□□□□ 0.2
COPB2P35606 GCLM-204ENST00000615724 3008 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
COPB2P35606 C21orf58-204ENST00000397682 2941 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
COPB2P35606 RSPRY1-202ENST00000537866 3586 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
COPB2P35606 RAB37-206ENST00000392615 2655 ntTSL 3 BASIC16.31■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 36.6 ms