Protein–RNA interactions for Protein: P35250

RFC2, Replication factor C subunit 2, humanhuman

Predictions only

Length 354 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC2P35250 SHTN1-201ENST00000260777 5308 ntAPPRIS ALT2 TSL 2 BASIC15.37■□□□□ 0.05
RFC2P35250 DMPK-202ENST00000343373 3227 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
RFC2P35250 PRNP-203ENST00000430350 2539 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
RFC2P35250 ACSS2-202ENST00000360596 3065 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
RFC2P35250 EFHC1-212ENST00000635984 3293 ntTSL 5 BASIC15.37■□□□□ 0.05
RFC2P35250 UPK1A-201ENST00000222275 1223 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
RFC2P35250 ZNF614-202ENST00000356322 1293 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
RFC2P35250 NSMCE1-201ENST00000361439 1067 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
RFC2P35250 UPK1A-202ENST00000379013 1016 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
RFC2P35250 GEMIN8P4-201ENST00000380526 729 ntBASIC15.37■□□□□ 0.05
RFC2P35250 IQCF4-202ENST00000422896 745 ntTSL 2 BASIC15.37■□□□□ 0.05
RFC2P35250 LINC01523-201ENST00000425385 450 ntTSL 2 BASIC15.37■□□□□ 0.05
RFC2P35250 LRRC3-AS1-201ENST00000426578 784 ntTSL 3 BASIC15.37■□□□□ 0.05
RFC2P35250 STK24P1-201ENST00000455035 1291 ntBASIC15.37■□□□□ 0.05
RFC2P35250 FAM3D-AS1-201ENST00000464125 821 ntTSL 3 BASIC15.37■□□□□ 0.05
RFC2P35250 CALCA-205ENST00000486207 851 ntAPPRIS P1 TSL 5 BASIC15.37■□□□□ 0.05
RFC2P35250 ANO3-205ENST00000531646 1264 ntTSL 4 BASIC15.37■□□□□ 0.05
RFC2P35250 ORAOV1-205ENST00000535657 709 ntAPPRIS P2 TSL 3 BASIC15.37■□□□□ 0.05
RFC2P35250 CR383656.13-201ENST00000550928 563 ntTSL 3 BASIC15.37■□□□□ 0.05
RFC2P35250 AL512310.10-201ENST00000555580 563 ntTSL 3 BASIC15.37■□□□□ 0.05
RFC2P35250 HNRNPA1P5-201ENST00000558213 966 ntBASIC15.37■□□□□ 0.05
RFC2P35250 AC074050.2-201ENST00000563338 538 ntTSL 3 BASIC15.37■□□□□ 0.05
RFC2P35250 LINC01543-201ENST00000578367 900 ntTSL 5 BASIC15.37■□□□□ 0.05
RFC2P35250 AL627230.2-201ENST00000613254 655 ntBASIC15.37■□□□□ 0.05
RFC2P35250 JAKMIP1-205ENST00000410077 1835 ntTSL 2 BASIC15.37■□□□□ 0.05
RFC2P35250 BRAT1-201ENST00000340611 2915 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
RFC2P35250 DPP6-203ENST00000404039 4798 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
RFC2P35250 OR3A2-205ENST00000641164 2033 ntAPPRIS P1 BASIC15.37■□□□□ 0.05
RFC2P35250 KRT8P43-201ENST00000406052 1458 ntBASIC15.37■□□□□ 0.05
RFC2P35250 CHRNA1-203ENST00000409219 1466 ntTSL 3 BASIC15.37■□□□□ 0.05
RFC2P35250 CLEC20A-202ENST00000623247 1491 ntAPPRIS P1 TSL 5 BASIC15.37■□□□□ 0.05
RFC2P35250 LINC00900-201ENST00000499809 3322 ntTSL 2 BASIC15.37■□□□□ 0.05
RFC2P35250 AC138035.3-201ENST00000622706 2791 ntBASIC15.37■□□□□ 0.05
RFC2P35250 CADPS2-205ENST00000449022 4073 ntTSL 5 BASIC15.37■□□□□ 0.05
RFC2P35250 RGPD8-201ENST00000302558 5576 ntAPPRIS P2 TSL 1 (best) BASIC15.37■□□□□ 0.05
RFC2P35250 KCNMA1-219ENST00000480683 2963 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
RFC2P35250 HELZ2-202ENST00000427522 7827 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
RFC2P35250 NIFK-AS1-203ENST00000419902 1316 ntTSL 2 BASIC15.37■□□□□ 0.05
RFC2P35250 LAMP5-202ENST00000427562 1309 ntTSL 2 BASIC15.37■□□□□ 0.05
RFC2P35250 GRAMD1C-201ENST00000358160 4177 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
RFC2P35250 RNF168-201ENST00000318037 5347 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
RFC2P35250 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC15.37■□□□□ 0.05
RFC2P35250 TMEM50A-201ENST00000374358 2683 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
RFC2P35250 SPHK2-210ENST00000599748 2683 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
RFC2P35250 UBASH3A-203ENST00000398367 1733 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
RFC2P35250 SLC26A11-202ENST00000411502 2872 ntAPPRIS P1 TSL 2 BASIC15.37■□□□□ 0.05
RFC2P35250 RCOR1-201ENST00000262241 5754 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
RFC2P35250 B3GLCT-201ENST00000343307 4254 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
RFC2P35250 BBS1-203ENST00000455748 1552 ntTSL 2 BASIC15.36■□□□□ 0.05
RFC2P35250 ALDOA-209ENST00000563060 1550 ntAPPRIS P2 TSL 1 (best) BASIC15.36■□□□□ 0.05
RFC2P35250 RBBP4-204ENST00000414241 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC15.36■□□□□ 0.05
RFC2P35250 CLEC18C-210ENST00000569347 1970 ntAPPRIS P2 TSL 1 (best) BASIC15.36■□□□□ 0.05
RFC2P35250 MX1-218ENST00000619682 1980 ntTSL 5 BASIC15.36■□□□□ 0.05
RFC2P35250 RHOH-220ENST00000615083 2156 ntAPPRIS P1 TSL 4 BASIC15.36■□□□□ 0.05
RFC2P35250 ACTL7B-201ENST00000374667 2379 ntAPPRIS P1 BASIC15.36■□□□□ 0.05
RFC2P35250 FOXB1-201ENST00000396057 2957 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
RFC2P35250 MFSD14B-201ENST00000375344 3420 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
RFC2P35250 BLCAP-205ENST00000397137 2036 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
RFC2P35250 NCF4-202ENST00000397147 1641 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
RFC2P35250 MYADML2-201ENST00000409745 2452 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
RFC2P35250 AIFM1-209ENST00000535724 2468 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
RFC2P35250 ERRFI1-201ENST00000377482 3104 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
RFC2P35250 ABLIM2-209ENST00000505872 1680 ntAPPRIS ALT2 TSL 5 BASIC15.36■□□□□ 0.05
RFC2P35250 PCED1B-202ENST00000546455 2328 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
RFC2P35250 KCNK9-201ENST00000303015 1245 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
RFC2P35250 BCL2L11-202ENST00000337565 720 ntTSL 5 BASIC15.36■□□□□ 0.05
RFC2P35250 HIST1H2BF-201ENST00000356530 1196 ntAPPRIS P1 BASIC15.36■□□□□ 0.05
RFC2P35250 RPL10-202ENST00000369817 1284 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
RFC2P35250 WASIR1-201ENST00000399966 1054 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
RFC2P35250 Z82188.2-201ENST00000419128 630 ntTSL 5 BASIC15.36■□□□□ 0.05
RFC2P35250 DEPDC1-AS1-201ENST00000428732 1247 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
RFC2P35250 AC147651.3-201ENST00000429872 731 ntTSL 2 BASIC15.36■□□□□ 0.05
RFC2P35250 AL035413.1-201ENST00000437898 507 ntTSL 2 BASIC15.36■□□□□ 0.05
RFC2P35250 SGO1-AS1-201ENST00000441442 499 ntTSL 4 BASIC15.36■□□□□ 0.05
RFC2P35250 GS1-124K5.4-201ENST00000445681 540 ntTSL 2 BASIC15.36■□□□□ 0.05
RFC2P35250 AL356218.1-201ENST00000450864 353 ntTSL 3 BASIC15.36■□□□□ 0.05
RFC2P35250 AC068057.1-201ENST00000453322 709 ntTSL 2 BASIC15.36■□□□□ 0.05
RFC2P35250 AC006450.3-201ENST00000453529 2146 ntTSL 2 BASIC15.36■□□□□ 0.05
RFC2P35250 CITED1-209ENST00000453707 998 ntAPPRIS ALT2 TSL 3 BASIC15.36■□□□□ 0.05
RFC2P35250 FOXP4-AS1-205ENST00000454812 575 ntTSL 2 BASIC15.36■□□□□ 0.05
RFC2P35250 RN7SL128P-201ENST00000467883 305 ntBASIC15.36■□□□□ 0.05
RFC2P35250 MIR5001-201ENST00000580185 100 ntBASIC15.36■□□□□ 0.05
RFC2P35250 AC073869.4-201ENST00000620841 800 ntBASIC15.36■□□□□ 0.05
RFC2P35250 CASP16P-204ENST00000635032 809 ntBASIC15.36■□□□□ 0.05
RFC2P35250 OSMR-AS1-204ENST00000636516 850 ntTSL 5 BASIC15.36■□□□□ 0.05
RFC2P35250 CCHCR1-208ENST00000451521 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
RFC2P35250 UHRF2-201ENST00000276893 3452 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
RFC2P35250 COQ4-201ENST00000300452 1548 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
RFC2P35250 ISCA2-204ENST00000556816 2626 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
RFC2P35250 ADAMTS13-201ENST00000355699 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
RFC2P35250 ATP5A1-215ENST00000590665 1793 ntTSL 2 BASIC15.36■□□□□ 0.05
RFC2P35250 CDH7-203ENST00000536984 3766 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
RFC2P35250 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC15.36■□□□□ 0.05
RFC2P35250 PRIMPOL-211ENST00000515774 2007 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
RFC2P35250 MED7-202ENST00000420343 1382 ntAPPRIS P1 TSL 2 BASIC15.36■□□□□ 0.05
RFC2P35250 RSPH6A-202ENST00000597055 2306 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
RFC2P35250 SNX2-201ENST00000379516 2128 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
RFC2P35250 ATP6V1C1-202ENST00000518738 2130 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
RFC2P35250 PAQR8-202ENST00000442253 4738 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
RFC2P35250 ATP5A1-201ENST00000282050 1945 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 48 ms