Protein–RNA interactions for Protein: P28702

RXRB, Retinoic acid receptor RXR-beta, humanhuman

Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RXRBP28702 FAM122A-201ENST00000394264 4575 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
RXRBP28702 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
RXRBP28702 THAP10-201ENST00000249861 2399 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
RXRBP28702 AC092850.2-201ENST00000623821 2697 ntBASIC18.15■□□□□ 0.5
RXRBP28702 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC18.15■□□□□ 0.5
RXRBP28702 MIR4435-2HG-201ENST00000308604 552 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
RXRBP28702 CST11-202ENST00000377009 554 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
RXRBP28702 C9orf24-202ENST00000379124 648 ntTSL 3 BASIC18.15■□□□□ 0.5
RXRBP28702 GEMIN8-203ENST00000398355 1119 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
RXRBP28702 AC096536.3-201ENST00000415336 575 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
RXRBP28702 AL121972.2-201ENST00000431108 556 ntTSL 4 BASIC18.15■□□□□ 0.5
RXRBP28702 CNN2P1-201ENST00000453616 918 ntBASIC18.15■□□□□ 0.5
RXRBP28702 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
RXRBP28702 AC114812.4-201ENST00000506676 757 ntBASIC18.15■□□□□ 0.5
RXRBP28702 FTH1-205ENST00000529631 507 ntTSL 4 BASIC18.15■□□□□ 0.5
RXRBP28702 TMEM241-208ENST00000542162 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
RXRBP28702 AC078878.2-201ENST00000543451 286 ntTSL 5 BASIC18.15■□□□□ 0.5
RXRBP28702 AP003170.2-201ENST00000544730 786 ntBASIC18.15■□□□□ 0.5
RXRBP28702 AL352977.2-201ENST00000557101 547 ntTSL 4 BASIC18.15■□□□□ 0.5
RXRBP28702 AC131274.3-201ENST00000578745 1271 ntBASIC18.15■□□□□ 0.5
RXRBP28702 MIR4526-201ENST00000583168 87 ntBASIC18.15■□□□□ 0.5
RXRBP28702 SMIM22-201ENST00000586005 366 ntAPPRIS P4 TSL 3 BASIC18.15■□□□□ 0.5
RXRBP28702 SEPT14P19-201ENST00000587432 336 ntTSL 2 BASIC18.15■□□□□ 0.5
RXRBP28702 AC009779.7-201ENST00000609031 469 ntBASIC18.15■□□□□ 0.5
RXRBP28702 PILRB-213ENST00000609309 993 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
RXRBP28702 FDPS-220ENST00000611010 1196 ntTSL 5 BASIC18.15■□□□□ 0.5
RXRBP28702 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
RXRBP28702 PRAL-201ENST00000624952 3286 ntBASIC18.15■□□□□ 0.5
RXRBP28702 DMC1-207ENST00000616615 1595 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
RXRBP28702 CRK-201ENST00000300574 3880 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
RXRBP28702 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
RXRBP28702 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
RXRBP28702 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
RXRBP28702 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
RXRBP28702 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC18.15■□□□□ 0.5
RXRBP28702 TNIP1-219ENST00000524280 1716 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
RXRBP28702 BORCS8-202ENST00000462790 1429 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
RXRBP28702 DUT-208ENST00000559540 1441 ntTSL 2 BASIC18.15■□□□□ 0.5
RXRBP28702 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
RXRBP28702 AL591806.3-201ENST00000289779 2096 ntAPPRIS P5 TSL 2 BASIC18.14■□□□□ 0.5
RXRBP28702 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC18.14■□□□□ 0.5
RXRBP28702 EML1-203ENST00000334192 4064 ntTSL 5 BASIC18.14■□□□□ 0.5
RXRBP28702 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.5
RXRBP28702 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
RXRBP28702 LTF-203ENST00000426532 2494 ntTSL 2 BASIC18.14■□□□□ 0.5
RXRBP28702 SLC34A2-202ENST00000503434 2174 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
RXRBP28702 SLC34A2-203ENST00000504570 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
RXRBP28702 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC18.14■□□□□ 0.49
RXRBP28702 LINC00877-207ENST00000488545 1561 ntTSL 3 BASIC18.14■□□□□ 0.49
RXRBP28702 FCRL1-207ENST00000491942 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
RXRBP28702 FLJ42969-201ENST00000514926 1948 ntTSL 2 BASIC18.14■□□□□ 0.49
RXRBP28702 ASIC4-201ENST00000347842 2684 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
RXRBP28702 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC18.14■□□□□ 0.49
RXRBP28702 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
RXRBP28702 KIR2DL1-201ENST00000291633 1203 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
RXRBP28702 AL162595.1-201ENST00000429227 868 ntTSL 5 BASIC18.14■□□□□ 0.49
RXRBP28702 IGFL1-201ENST00000437936 769 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
RXRBP28702 LINC01664-202ENST00000441544 1175 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
RXRBP28702 FHIT-205ENST00000476844 1033 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
RXRBP28702 RN7SL646P-201ENST00000492969 297 ntBASIC18.14■□□□□ 0.49
RXRBP28702 AC010442.2-201ENST00000509301 407 ntBASIC18.14■□□□□ 0.49
RXRBP28702 AC022424.2-201ENST00000514848 454 ntTSL 2 BASIC18.14■□□□□ 0.49
RXRBP28702 MRNIP-216ENST00000521333 410 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
RXRBP28702 PXN-AS1-205ENST00000542314 707 ntTSL 2 BASIC18.14■□□□□ 0.49
RXRBP28702 AC100778.4-201ENST00000581232 582 ntTSL 4 BASIC18.14■□□□□ 0.49
RXRBP28702 RN7SL460P-201ENST00000582806 258 ntBASIC18.14■□□□□ 0.49
RXRBP28702 PSMG3-AS1-207ENST00000612019 586 ntTSL 4 BASIC18.14■□□□□ 0.49
RXRBP28702 AC112702.1-201ENST00000623712 366 ntBASIC18.14■□□□□ 0.49
RXRBP28702 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
RXRBP28702 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
RXRBP28702 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
RXRBP28702 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC18.14■□□□□ 0.49
RXRBP28702 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
RXRBP28702 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC18.14■□□□□ 0.49
RXRBP28702 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC18.14■□□□□ 0.49
RXRBP28702 AL356583.1-201ENST00000398739 1371 ntBASIC18.14■□□□□ 0.49
RXRBP28702 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
RXRBP28702 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
RXRBP28702 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
RXRBP28702 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
RXRBP28702 NOX3-201ENST00000159060 2042 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
RXRBP28702 AC022211.2-201ENST00000585075 2527 ntBASIC18.13■□□□□ 0.49
RXRBP28702 Z82195.2-202ENST00000458525 1646 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
RXRBP28702 IFNAR2-201ENST00000342101 2606 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
RXRBP28702 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
RXRBP28702 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
RXRBP28702 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
RXRBP28702 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
RXRBP28702 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
RXRBP28702 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
RXRBP28702 TRAF4-202ENST00000262396 683 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
RXRBP28702 SERF2-205ENST00000403425 690 ntTSL 2 BASIC18.13■□□□□ 0.49
RXRBP28702 MORN2-205ENST00000410014 750 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
RXRBP28702 HMGN1P4-201ENST00000419500 290 ntBASIC18.13■□□□□ 0.49
RXRBP28702 HNRNPA1P68-201ENST00000425806 979 ntBASIC18.13■□□□□ 0.49
RXRBP28702 ALKBH2-203ENST00000440112 574 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
RXRBP28702 SGO1-AS1-201ENST00000441442 499 ntTSL 4 BASIC18.13■□□□□ 0.49
RXRBP28702 PRDX3P2-201ENST00000447051 611 ntBASIC18.13■□□□□ 0.49
RXRBP28702 OR2A15P-201ENST00000463814 900 ntBASIC18.13■□□□□ 0.49
RXRBP28702 RN7SL111P-201ENST00000468841 285 ntBASIC18.13■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 50 ms