Protein–RNA interactions for Protein: P22736

NR4A1, Nuclear receptor subfamily 4 group A member 1, humanhuman

Predictions only

Length 598 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR4A1P22736 WASH3P-204ENST00000558784 1644 ntTSL 5 BASIC13.45□□□□□ -0.26
NR4A1P22736 CU639417.3-201ENST00000624240 1404 ntBASIC13.45□□□□□ -0.26
NR4A1P22736 DYRK1A-203ENST00000398956 1590 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
NR4A1P22736 VRK3-201ENST00000316763 1938 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
NR4A1P22736 WWTR1-203ENST00000465804 5030 ntAPPRIS P1 TSL 2 BASIC13.45□□□□□ -0.26
NR4A1P22736 ANKRD20A1-201ENST00000562196 3379 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
NR4A1P22736 INPP5J-201ENST00000331075 3347 ntAPPRIS ALT2 TSL 2 BASIC13.44□□□□□ -0.26
NR4A1P22736 GAS2L3-201ENST00000266754 2218 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
NR4A1P22736 KLRG1-201ENST00000266551 1335 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
NR4A1P22736 NRG1-201ENST00000287842 2035 ntAPPRIS P4 TSL 1 (best) BASIC13.44□□□□□ -0.26
NR4A1P22736 AGAP12P-201ENST00000585227 2359 ntBASIC13.44□□□□□ -0.26
NR4A1P22736 RGS3-205ENST00000374134 2862 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
NR4A1P22736 HIST2H2BF-201ENST00000369167 1954 ntAPPRIS P1 BASIC13.44□□□□□ -0.26
NR4A1P22736 ELAVL4-207ENST00000448907 1951 ntTSL 2 BASIC13.44□□□□□ -0.26
NR4A1P22736 KCNMA1-210ENST00000404771 4014 ntAPPRIS ALT2 TSL 5 BASIC13.44□□□□□ -0.26
NR4A1P22736 PTPN5-205ENST00000477854 2826 ntTSL 5 BASIC13.44□□□□□ -0.26
NR4A1P22736 LST1-202ENST00000303757 604 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
NR4A1P22736 MRGPRF-202ENST00000320913 705 ntTSL 2 BASIC13.44□□□□□ -0.26
NR4A1P22736 ZDHHC12-201ENST00000372663 1129 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
NR4A1P22736 TRAPPC3-203ENST00000373163 951 ntTSL 3 BASIC13.44□□□□□ -0.26
NR4A1P22736 SDHB-201ENST00000375499 1153 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
NR4A1P22736 WDR45-208ENST00000396681 1146 ntTSL 5 BASIC13.44□□□□□ -0.26
NR4A1P22736 KCNQ1DN-201ENST00000441418 1093 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
NR4A1P22736 GALT-202ENST00000450095 1280 ntTSL 2 BASIC13.44□□□□□ -0.26
NR4A1P22736 RN7SL752P-201ENST00000463779 287 ntBASIC13.44□□□□□ -0.26
NR4A1P22736 SELENOT-203ENST00000477889 944 ntTSL 5 BASIC13.44□□□□□ -0.26
NR4A1P22736 AC011495.1-201ENST00000498085 584 ntBASIC13.44□□□□□ -0.26
NR4A1P22736 AC009686.1-201ENST00000522494 364 ntTSL 3 BASIC13.44□□□□□ -0.26
NR4A1P22736 AC008750.2-202ENST00000532688 729 ntTSL 3 BASIC13.44□□□□□ -0.26
NR4A1P22736 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC13.44□□□□□ -0.26
NR4A1P22736 AC099482.1-201ENST00000563471 481 ntTSL 2 BASIC13.44□□□□□ -0.26
NR4A1P22736 ZNF83-215ENST00000600714 810 ntTSL 3 BASIC13.44□□□□□ -0.26
NR4A1P22736 SRP9-204ENST00000619790 377 ntTSL 2 BASIC13.44□□□□□ -0.26
NR4A1P22736 FKBP4-208ENST00000630279 156 ntTSL 5 BASIC13.44□□□□□ -0.26
NR4A1P22736 ADCYAP1R1-204ENST00000409489 1761 ntTSL 5 BASIC13.44□□□□□ -0.26
NR4A1P22736 PTPN5-203ENST00000396168 2796 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
NR4A1P22736 ARAP1-202ENST00000359373 5767 ntAPPRIS ALT2 TSL 2 BASIC13.44□□□□□ -0.26
NR4A1P22736 SLC4A2-201ENST00000392826 3947 ntAPPRIS ALT2 TSL 2 BASIC13.44□□□□□ -0.26
NR4A1P22736 TUBBP5-201ENST00000290377 1563 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
NR4A1P22736 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
NR4A1P22736 DUOX2-205ENST00000603300 6345 ntAPPRIS P2 TSL 1 (best) BASIC13.44□□□□□ -0.26
NR4A1P22736 CEP295NL-205ENST00000619342 1866 ntTSL 5 BASIC13.44□□□□□ -0.26
NR4A1P22736 TCTN2-202ENST00000426174 2513 ntAPPRIS ALT2 TSL 2 BASIC13.44□□□□□ -0.26
NR4A1P22736 DIS3L2-205ENST00000409401 2048 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
NR4A1P22736 CD1B-201ENST00000368168 1395 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
NR4A1P22736 ZBTB20-206ENST00000464560 2816 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
NR4A1P22736 GNB2-202ENST00000393924 1524 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
NR4A1P22736 THBS2-201ENST00000366787 5811 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
NR4A1P22736 MDM1-201ENST00000303145 2918 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
NR4A1P22736 MED14-201ENST00000324817 7984 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
NR4A1P22736 CDIP1-201ENST00000399599 3009 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
NR4A1P22736 TRIM46-205ENST00000392451 3195 ntTSL 2 BASIC13.43□□□□□ -0.26
NR4A1P22736 NME7-201ENST00000367811 1642 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
NR4A1P22736 AC055854.1-203ENST00000521141 1630 ntTSL 5 BASIC13.43□□□□□ -0.26
NR4A1P22736 NEU3-201ENST00000294064 6728 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
NR4A1P22736 ARMCX3-203ENST00000471229 2051 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
NR4A1P22736 PAK1-201ENST00000278568 2543 ntTSL 2 BASIC13.43□□□□□ -0.26
NR4A1P22736 NTRK2-203ENST00000323115 3708 ntAPPRIS ALT1 TSL 1 (best) BASIC13.43□□□□□ -0.26
NR4A1P22736 SS18L2-201ENST00000011691 781 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
NR4A1P22736 NOP58-201ENST00000264279 2046 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
NR4A1P22736 ATP6V1C2-201ENST00000272238 1565 ntTSL 5 BASIC13.43□□□□□ -0.26
NR4A1P22736 MALL-201ENST00000272462 3061 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
NR4A1P22736 METAP1-201ENST00000296411 2791 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
NR4A1P22736 BANF1-201ENST00000312175 1155 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
NR4A1P22736 FAM104B-202ENST00000358460 1179 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
NR4A1P22736 CREB3L4-204ENST00000368603 1557 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
NR4A1P22736 CNTLN-201ENST00000380641 4871 ntAPPRIS ALT2 TSL 2 BASIC13.43□□□□□ -0.26
NR4A1P22736 HOPX-203ENST00000381255 1164 ntAPPRIS P1 TSL 2 BASIC13.43□□□□□ -0.26
NR4A1P22736 ADAMTSL2-203ENST00000393061 4270 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
NR4A1P22736 ITIH1-202ENST00000405128 1122 ntTSL 2 BASIC13.43□□□□□ -0.26
NR4A1P22736 AC134915.1-201ENST00000426461 574 ntBASIC13.43□□□□□ -0.26
NR4A1P22736 UFL1-AS1-201ENST00000430796 548 ntTSL 3 BASIC13.43□□□□□ -0.26
NR4A1P22736 AC114730.3-201ENST00000435195 584 ntTSL 5 BASIC13.43□□□□□ -0.26
NR4A1P22736 RNASEH1-AS1-202ENST00000438436 1218 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
NR4A1P22736 Z98749.2-207ENST00000443658 679 ntTSL 2 BASIC13.43□□□□□ -0.26
NR4A1P22736 AC140481.1-201ENST00000448777 706 ntTSL 3 BASIC13.43□□□□□ -0.26
NR4A1P22736 S100A6-205ENST00000496817 673 ntAPPRIS P1 TSL 2 BASIC13.43□□□□□ -0.26
NR4A1P22736 LACTB2-203ENST00000522447 1034 ntAPPRIS P1 TSL 2 BASIC13.43□□□□□ -0.26
NR4A1P22736 PUF60-209ENST00000527197 1559 ntTSL 5 BASIC13.43□□□□□ -0.26
NR4A1P22736 AC006064.3-201ENST00000537921 477 ntTSL 4 BASIC13.43□□□□□ -0.26
NR4A1P22736 LINC02298-201ENST00000546968 965 ntTSL 5 BASIC13.43□□□□□ -0.26
NR4A1P22736 HOPX-210ENST00000553379 1001 ntAPPRIS P1 TSL 2 BASIC13.43□□□□□ -0.26
NR4A1P22736 HOPX-212ENST00000555760 1139 ntAPPRIS P1 TSL 3 BASIC13.43□□□□□ -0.26
NR4A1P22736 HOPX-213ENST00000556376 1064 ntAPPRIS P1 TSL 3 BASIC13.43□□□□□ -0.26
NR4A1P22736 SMIM22-202ENST00000586440 549 ntAPPRIS P4 TSL 1 (best) BASIC13.43□□□□□ -0.26
NR4A1P22736 TUBB6-203ENST00000586653 788 ntTSL 2 BASIC13.43□□□□□ -0.26
NR4A1P22736 GPX4-206ENST00000588919 803 ntTSL 2 BASIC13.43□□□□□ -0.26
NR4A1P22736 TBCB-211ENST00000589996 724 ntTSL 3 BASIC13.43□□□□□ -0.26
NR4A1P22736 AL049840.4-201ENST00000602422 811 ntBASIC13.43□□□□□ -0.26
NR4A1P22736 AC133539.2-201ENST00000604757 467 ntBASIC13.43□□□□□ -0.26
NR4A1P22736 IFI27-206ENST00000612813 725 ntAPPRIS P2 TSL 3 BASIC13.43□□□□□ -0.26
NR4A1P22736 WFDC1-204ENST00000613603 549 ntBASIC13.43□□□□□ -0.26
NR4A1P22736 EBAG9-209ENST00000614147 1179 ntTSL 5 BASIC13.43□□□□□ -0.26
NR4A1P22736 AC243829.4-204ENST00000616926 1115 ntTSL 5 BASIC13.43□□□□□ -0.26
NR4A1P22736 GABPA-202ENST00000400075 4814 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
NR4A1P22736 OLFML2A-203ENST00000373580 6425 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
NR4A1P22736 NAP1L2-201ENST00000373517 2550 ntAPPRIS P1 BASIC13.43□□□□□ -0.26
NR4A1P22736 AL162431.2-201ENST00000358073 2424 ntTSL 2 BASIC13.43□□□□□ -0.26
NR4A1P22736 TP73-207ENST00000378290 1831 ntTSL 2 BASIC13.43□□□□□ -0.26
NR4A1P22736 NCDN-201ENST00000356090 3433 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 59.2 ms