Protein–RNA interactions for Protein: P01033

TIMP1, Metalloproteinase inhibitor 1, humanhuman

Predictions only

Length 207 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP1P01033 USP39-220ENST00000613444 2161 ntTSL 2 BASIC15.17■□□□□ 0.02
TIMP1P01033 MPHOSPH10-205ENST00000498451 2068 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
TIMP1P01033 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
TIMP1P01033 ASH2L-212ENST00000545394 2808 ntTSL 2 BASIC15.16■□□□□ 0.02
TIMP1P01033 SLC26A11-203ENST00000546047 2807 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
TIMP1P01033 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
TIMP1P01033 MAPK7-203ENST00000395602 3059 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
TIMP1P01033 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
TIMP1P01033 TTC29-208ENST00000513335 2226 ntAPPRIS ALT2 TSL 2 BASIC15.16■□□□□ 0.02
TIMP1P01033 FCRL1-207ENST00000491942 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
TIMP1P01033 PIANP-202ENST00000534837 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
TIMP1P01033 LINC00479-201ENST00000412102 2033 ntTSL 2 BASIC15.16■□□□□ 0.02
TIMP1P01033 CRISP2-201ENST00000339139 1382 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
TIMP1P01033 ACOX3-202ENST00000413009 2374 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
TIMP1P01033 FAU-201ENST00000279259 461 ntTSL 2 BASIC15.16■□□□□ 0.02
TIMP1P01033 CALML6-201ENST00000307786 1101 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
TIMP1P01033 IL1F10-201ENST00000341010 1013 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
TIMP1P01033 TRPM3-205ENST00000361823 1260 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
TIMP1P01033 CCL19-202ENST00000378800 414 ntTSL 2 BASIC15.16■□□□□ 0.02
TIMP1P01033 SNHG14-201ENST00000414175 610 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
TIMP1P01033 TXNL4B-203ENST00000426362 965 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
TIMP1P01033 AC011284.1-201ENST00000427920 856 ntTSL 4 BASIC15.16■□□□□ 0.02
TIMP1P01033 LINC01502-203ENST00000447907 880 ntTSL 3 BASIC15.16■□□□□ 0.02
TIMP1P01033 AC015818.1-201ENST00000451011 244 ntBASIC15.16■□□□□ 0.02
TIMP1P01033 AC104212.2-201ENST00000478813 628 ntBASIC15.16■□□□□ 0.02
TIMP1P01033 AC026412.1-206ENST00000502273 206 ntBASIC15.16■□□□□ 0.02
TIMP1P01033 AC112250.1-201ENST00000504640 745 ntBASIC15.16■□□□□ 0.02
TIMP1P01033 AC011431.1-201ENST00000512971 230 ntBASIC15.16■□□□□ 0.02
TIMP1P01033 BLOC1S1-203ENST00000548925 571 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
TIMP1P01033 LINC01490-202ENST00000551399 1260 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
TIMP1P01033 INO80E-209ENST00000567254 625 ntTSL 2 BASIC15.16■□□□□ 0.02
TIMP1P01033 AC004466.2-201ENST00000614749 516 ntBASIC15.16■□□□□ 0.02
TIMP1P01033 AC005746.3-201ENST00000614751 393 ntBASIC15.16■□□□□ 0.02
TIMP1P01033 AC079779.4-201ENST00000619113 548 ntTSL 5 BASIC15.16■□□□□ 0.02
TIMP1P01033 GARS-210ENST00000627489 324 ntTSL 4 BASIC15.16■□□□□ 0.02
TIMP1P01033 MECP2-217ENST00000628176 1712 ntTSL 3 BASIC15.16■□□□□ 0.02
TIMP1P01033 TBC1D2-203ENST00000375064 3174 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
TIMP1P01033 RUNDC3B-202ENST00000338056 4099 ntTSL 2 BASIC15.16■□□□□ 0.02
TIMP1P01033 KLHL26-201ENST00000300976 4407 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
TIMP1P01033 METTL7B-201ENST00000394252 1506 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
TIMP1P01033 PML-215ENST00000565898 5393 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
TIMP1P01033 CPPED1-201ENST00000261660 1898 ntTSL 2 BASIC15.16■□□□□ 0.02
TIMP1P01033 ANKMY2-201ENST00000306999 2555 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
TIMP1P01033 PPT2-245ENST00000361568 1759 ntAPPRIS P4 TSL 1 (best) BASIC15.16■□□□□ 0.02
TIMP1P01033 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
TIMP1P01033 AC011498.7-201ENST00000624986 2027 ntBASIC15.16■□□□□ 0.02
TIMP1P01033 ZNF557-201ENST00000252840 2268 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
TIMP1P01033 YY1AP1-201ENST00000295566 2626 ntAPPRIS P4 TSL 2 BASIC15.15■□□□□ 0.02
TIMP1P01033 PUF60-209ENST00000527197 1559 ntTSL 5 BASIC15.15■□□□□ 0.02
TIMP1P01033 PLXNC1-202ENST00000545312 1813 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
TIMP1P01033 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
TIMP1P01033 UNC119B-201ENST00000344651 4404 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
TIMP1P01033 CHRNA1-205ENST00000409542 1460 ntTSL 3 BASIC15.15■□□□□ 0.02
TIMP1P01033 SALL2-205ENST00000611430 1466 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
TIMP1P01033 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
TIMP1P01033 SIK3-201ENST00000375300 6213 ntAPPRIS P3 TSL 2 BASIC15.15■□□□□ 0.02
TIMP1P01033 APOF-201ENST00000398189 1715 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
TIMP1P01033 HID1-202ENST00000425042 3271 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
TIMP1P01033 CMBL-201ENST00000296658 2335 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
TIMP1P01033 HLF-202ENST00000430986 1385 ntTSL 2 BASIC15.15■□□□□ 0.02
TIMP1P01033 XKR5-201ENST00000618742 4893 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
TIMP1P01033 TOR2A-202ENST00000373281 2477 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
TIMP1P01033 C16orf45-202ENST00000452191 1865 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
TIMP1P01033 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
TIMP1P01033 MAL-204ENST00000354078 831 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
TIMP1P01033 PMF1-203ENST00000368279 1019 ntTSL 2 BASIC15.15■□□□□ 0.02
TIMP1P01033 MIR611-201ENST00000384869 67 ntBASIC15.15■□□□□ 0.02
TIMP1P01033 OR7E155P-201ENST00000412208 1014 ntBASIC15.15■□□□□ 0.02
TIMP1P01033 AL158207.2-201ENST00000414926 266 ntTSL 5 BASIC15.15■□□□□ 0.02
TIMP1P01033 KCNK15-AS1-202ENST00000427303 528 ntTSL 5 BASIC15.15■□□□□ 0.02
TIMP1P01033 AC010086.2-201ENST00000428616 226 ntBASIC15.15■□□□□ 0.02
TIMP1P01033 CCND3P1-201ENST00000438347 580 ntBASIC15.15■□□□□ 0.02
TIMP1P01033 LINC00399-201ENST00000439008 414 ntTSL 2 BASIC15.15■□□□□ 0.02
TIMP1P01033 HNRNPA1P10-201ENST00000444945 962 ntBASIC15.15■□□□□ 0.02
TIMP1P01033 AL137078.1-201ENST00000446280 404 ntTSL 2 BASIC15.15■□□□□ 0.02
TIMP1P01033 AC022274.1-201ENST00000467082 490 ntTSL 5 BASIC15.15■□□□□ 0.02
TIMP1P01033 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
TIMP1P01033 DPY19L2P4-201ENST00000479881 442 ntBASIC15.15■□□□□ 0.02
TIMP1P01033 RPL29P2-201ENST00000488409 460 ntBASIC15.15■□□□□ 0.02
TIMP1P01033 AC008494.1-201ENST00000497612 796 ntBASIC15.15■□□□□ 0.02
TIMP1P01033 CHTF8-207ENST00000520529 475 ntTSL 2 BASIC15.15■□□□□ 0.02
TIMP1P01033 AC011676.3-201ENST00000520606 294 ntTSL 5 BASIC15.15■□□□□ 0.02
TIMP1P01033 INPPL1-207ENST00000538751 4656 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
TIMP1P01033 AC005993.1-201ENST00000555581 397 ntTSL 5 BASIC15.15■□□□□ 0.02
TIMP1P01033 GRAMD4P6-201ENST00000556999 244 ntBASIC15.15■□□□□ 0.02
TIMP1P01033 LINC01029-202ENST00000578833 366 ntTSL 3 BASIC15.15■□□□□ 0.02
TIMP1P01033 KRT17P4-203ENST00000579355 621 ntTSL 3 BASIC15.15■□□□□ 0.02
TIMP1P01033 AL353997.6-201ENST00000583394 621 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
TIMP1P01033 AC008982.2-201ENST00000600473 493 ntTSL 5 BASIC15.15■□□□□ 0.02
TIMP1P01033 KF455155.1-201ENST00000604493 303 ntBASIC15.15■□□□□ 0.02
TIMP1P01033 AC020922.4-201ENST00000621389 339 ntBASIC15.15■□□□□ 0.02
TIMP1P01033 MLEC-201ENST00000228506 6626 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
TIMP1P01033 SSFA2-205ENST00000431877 5150 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
TIMP1P01033 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
TIMP1P01033 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
TIMP1P01033 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC15.15■□□□□ 0.02
TIMP1P01033 TMEM143-203ENST00000435956 2272 ntTSL 2 BASIC15.15■□□□□ 0.02
TIMP1P01033 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
TIMP1P01033 KIAA1217-206ENST00000376462 6123 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
TIMP1P01033 UBE2D1-201ENST00000373910 2659 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 138.9 ms