Protein–RNA interactions for Protein: Q9NWS1

PARPBP, PCNA-interacting partner, humanhuman

Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PARPBPQ9NWS1 NPR1-202ENST00000368680 4236 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
PARPBPQ9NWS1 ARHGEF26-203ENST00000465817 2353 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
PARPBPQ9NWS1 NUTM2A-202ENST00000381707 3290 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
PARPBPQ9NWS1 NUTM2B-203ENST00000429828 3292 ntAPPRIS P2 TSL 5 BASIC12.95□□□□□ -0.34
PARPBPQ9NWS1 SH3PXD2B-201ENST00000311601 7777 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
PARPBPQ9NWS1 GPR37-201ENST00000303921 3021 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
PARPBPQ9NWS1 AL358216.1-201ENST00000451601 1657 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
PARPBPQ9NWS1 LINC01184-204ENST00000501702 2977 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
PARPBPQ9NWS1 PHF3-209ENST00000509330 2969 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
PARPBPQ9NWS1 YME1L1-202ENST00000375972 2517 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
PARPBPQ9NWS1 ACOT7-203ENST00000377845 1432 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
PARPBPQ9NWS1 CCDC197-206ENST00000640978 1429 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
PARPBPQ9NWS1 PIK3IP1-201ENST00000215912 2467 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
PARPBPQ9NWS1 UBA1-202ENST00000377269 2497 ntTSL 2 BASIC12.95□□□□□ -0.34
PARPBPQ9NWS1 TMPRSS9-201ENST00000332578 3331 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
PARPBPQ9NWS1 STK40-201ENST00000359297 4837 ntTSL 2 BASIC12.95□□□□□ -0.34
PARPBPQ9NWS1 SLC35G3-201ENST00000297307 2004 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
PARPBPQ9NWS1 SCFD2-201ENST00000388940 2221 ntTSL 2 BASIC12.94□□□□□ -0.34
PARPBPQ9NWS1 LYN-204ENST00000520220 5808 ntAPPRIS ALT1 TSL 1 (best) BASIC12.94□□□□□ -0.34
PARPBPQ9NWS1 GRIK5-201ENST00000262895 3493 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
PARPBPQ9NWS1 MAP2K1-201ENST00000307102 3410 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
PARPBPQ9NWS1 RHOH-220ENST00000615083 2156 ntAPPRIS P1 TSL 4 BASIC12.94□□□□□ -0.34
PARPBPQ9NWS1 SCARA5-201ENST00000354914 4026 ntAPPRIS P1 TSL 2 BASIC12.94□□□□□ -0.34
PARPBPQ9NWS1 SLC25A35-201ENST00000380067 2785 ntTSL 2 BASIC12.94□□□□□ -0.34
PARPBPQ9NWS1 CNBP-208ENST00000504813 1549 ntAPPRIS ALT1 TSL 2 BASIC12.94□□□□□ -0.34
PARPBPQ9NWS1 NAPEPLD-201ENST00000341533 4972 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
PARPBPQ9NWS1 DDX49-214ENST00000629999 1912 ntTSL 5 BASIC12.94□□□□□ -0.34
PARPBPQ9NWS1 SLC38A5-212ENST00000619100 2100 ntTSL 2 BASIC12.94□□□□□ -0.34
PARPBPQ9NWS1 SLC38A5-214ENST00000622196 2100 ntTSL 5 BASIC12.94□□□□□ -0.34
PARPBPQ9NWS1 CA12-202ENST00000344366 2744 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
PARPBPQ9NWS1 DENND3-202ENST00000424248 4740 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
PARPBPQ9NWS1 ABCC6-201ENST00000205557 5747 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
PARPBPQ9NWS1 PTBP1-221ENST00000635647 3691 ntTSL 5 BASIC12.94□□□□□ -0.34
PARPBPQ9NWS1 CALHM1-201ENST00000329905 3053 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
PARPBPQ9NWS1 DDR1-271ENST00000513240 2882 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
PARPBPQ9NWS1 REM1-201ENST00000201979 1665 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
PARPBPQ9NWS1 C1orf123-201ENST00000294360 1085 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
PARPBPQ9NWS1 IFNL2-201ENST00000331982 737 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
PARPBPQ9NWS1 KRTAP21-2-201ENST00000333892 440 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
PARPBPQ9NWS1 PAX4-201ENST00000338516 1085 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
PARPBPQ9NWS1 ZNF248-202ENST00000374648 1286 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
PARPBPQ9NWS1 GTF2A2-205ENST00000396064 633 ntTSL 3 BASIC12.94□□□□□ -0.34
PARPBPQ9NWS1 AC006033.1-201ENST00000440505 426 ntBASIC12.94□□□□□ -0.34
PARPBPQ9NWS1 MRPS25-203ENST00000444840 1281 ntTSL 2 BASIC12.94□□□□□ -0.34
PARPBPQ9NWS1 AL160290.2-201ENST00000448347 831 ntTSL 3 BASIC12.94□□□□□ -0.34
PARPBPQ9NWS1 AL139010.1-202ENST00000452528 1041 ntTSL 2 BASIC12.94□□□□□ -0.34
PARPBPQ9NWS1 GTF2A2-208ENST00000484743 408 ntTSL 2 BASIC12.94□□□□□ -0.34
PARPBPQ9NWS1 AC108725.1-201ENST00000495472 409 ntBASIC12.94□□□□□ -0.34
PARPBPQ9NWS1 AC020659.2-202ENST00000512295 513 ntTSL 2 BASIC12.94□□□□□ -0.34
PARPBPQ9NWS1 NME2-206ENST00000513177 692 ntAPPRIS P1 TSL 2 BASIC12.94□□□□□ -0.34
PARPBPQ9NWS1 CD63-208ENST00000549117 1233 ntAPPRIS P1 TSL 3 BASIC12.94□□□□□ -0.34
PARPBPQ9NWS1 MIR4783-201ENST00000580343 82 ntBASIC12.94□□□□□ -0.34
PARPBPQ9NWS1 AC005962.1-201ENST00000584100 773 ntBASIC12.94□□□□□ -0.34
PARPBPQ9NWS1 NKG7-204ENST00000595217 816 ntTSL 2 BASIC12.94□□□□□ -0.34
PARPBPQ9NWS1 AC133540.1-201ENST00000620845 1019 ntBASIC12.94□□□□□ -0.34
PARPBPQ9NWS1 CUEDC1-206ENST00000577830 3621 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
PARPBPQ9NWS1 PRR34-201ENST00000396008 2817 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
PARPBPQ9NWS1 LGALS8-203ENST00000341872 2437 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
PARPBPQ9NWS1 TRIO-202ENST00000344204 11100 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
PARPBPQ9NWS1 ELF3-202ENST00000367283 2044 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
PARPBPQ9NWS1 SYT12-201ENST00000393946 4534 ntAPPRIS P1 TSL 2 BASIC12.94□□□□□ -0.34
PARPBPQ9NWS1 IRF9-202ENST00000396864 1838 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
PARPBPQ9NWS1 GTF2H2C-210ENST00000510979 2952 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
PARPBPQ9NWS1 APBB1IP-202ENST00000376236 2771 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
PARPBPQ9NWS1 ZNF84-215ENST00000543758 3501 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
PARPBPQ9NWS1 MIR762HG-203ENST00000570025 1429 ntTSL 2 BASIC12.94□□□□□ -0.34
PARPBPQ9NWS1 COL1A1-201ENST00000225964 6727 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
PARPBPQ9NWS1 ARAP1-202ENST00000359373 5767 ntAPPRIS ALT2 TSL 2 BASIC12.94□□□□□ -0.34
PARPBPQ9NWS1 TP73-211ENST00000604074 4806 ntTSL 5 BASIC12.94□□□□□ -0.34
PARPBPQ9NWS1 STRCP1-201ENST00000509801 5328 ntBASIC12.94□□□□□ -0.34
PARPBPQ9NWS1 POLG-201ENST00000268124 4500 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
PARPBPQ9NWS1 OS9-207ENST00000439210 1946 ntTSL 2 BASIC12.94□□□□□ -0.34
PARPBPQ9NWS1 SEPT9-228ENST00000590294 2816 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
PARPBPQ9NWS1 AC025171.1-202ENST00000499871 2271 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
PARPBPQ9NWS1 HACD2-201ENST00000383657 4257 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
PARPBPQ9NWS1 FAS-202ENST00000352159 1722 ntTSL 5 BASIC12.93□□□□□ -0.34
PARPBPQ9NWS1 C4B-AS1-205ENST00000415626 2095 ntTSL 2 BASIC12.93□□□□□ -0.34
PARPBPQ9NWS1 C4A-AS1-204ENST00000458633 2095 ntTSL 2 BASIC12.93□□□□□ -0.34
PARPBPQ9NWS1 TMBIM7P-202ENST00000641474 1516 ntBASIC12.93□□□□□ -0.34
PARPBPQ9NWS1 YTHDF3-209ENST00000617200 5076 ntTSL 5 BASIC12.93□□□□□ -0.34
PARPBPQ9NWS1 DLK1-201ENST00000331224 1324 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
PARPBPQ9NWS1 LBHD1-201ENST00000354588 1320 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
PARPBPQ9NWS1 AHCYP4-201ENST00000419201 1315 ntBASIC12.93□□□□□ -0.34
PARPBPQ9NWS1 SELENON-202ENST00000361547 4334 ntAPPRIS P4 TSL 1 (best) BASIC12.93□□□□□ -0.34
PARPBPQ9NWS1 AC144522.1-201ENST00000625111 1658 ntBASIC12.93□□□□□ -0.34
PARPBPQ9NWS1 KIF6-203ENST00000394362 2394 ntTSL 5 BASIC12.93□□□□□ -0.34
PARPBPQ9NWS1 PDPR-202ENST00000398122 2734 ntTSL 2 BASIC12.93□□□□□ -0.34
PARPBPQ9NWS1 CAMK2B-217ENST00000457475 4142 ntTSL 5 BASIC12.93□□□□□ -0.34
PARPBPQ9NWS1 ANKRD13B-201ENST00000394859 3214 ntAPPRIS P1 TSL 2 BASIC12.93□□□□□ -0.34
PARPBPQ9NWS1 ARVCF-203ENST00000406259 2871 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
PARPBPQ9NWS1 ARHGAP9-213ENST00000550288 2818 ntTSL 2 BASIC12.93□□□□□ -0.34
PARPBPQ9NWS1 HHEX-202ENST00000472590 1605 ntTSL 2 BASIC12.93□□□□□ -0.34
PARPBPQ9NWS1 RAB40AL-201ENST00000218249 1029 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
PARPBPQ9NWS1 HIST1H1B-201ENST00000331442 681 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
PARPBPQ9NWS1 CSH2-201ENST00000336844 1173 ntTSL 2 BASIC12.93□□□□□ -0.34
PARPBPQ9NWS1 CSH2-202ENST00000345366 598 ntTSL 5 BASIC12.93□□□□□ -0.34
PARPBPQ9NWS1 ARMCX1-201ENST00000372829 2141 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
PARPBPQ9NWS1 TREML1-201ENST00000373127 1194 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
PARPBPQ9NWS1 RPL18P13-201ENST00000478088 569 ntBASIC12.93□□□□□ -0.34
PARPBPQ9NWS1 FAM86B1-218ENST00000534520 808 ntTSL 2 BASIC12.93□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 48.5 ms