Protein–RNA interactions for Protein: Q9HCM3

KIAA1549, UPF0606 protein KIAA1549, humanhuman

Predictions only

Length 1,950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KIAA1549Q9HCM3 RAB25-201ENST00000361084 1110 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
KIAA1549Q9HCM3 MAPK13-202ENST00000373759 1036 ntTSL 5 BASIC12.63□□□□□ -0.39
KIAA1549Q9HCM3 SPIN2B-203ENST00000374910 725 ntTSL 3 BASIC12.63□□□□□ -0.39
KIAA1549Q9HCM3 NUDT2-202ENST00000379155 1002 ntAPPRIS P1 TSL 3 BASIC12.63□□□□□ -0.39
KIAA1549Q9HCM3 RN7SKP109-201ENST00000410592 316 ntBASIC12.63□□□□□ -0.39
KIAA1549Q9HCM3 SLC5A4-AS1-201ENST00000434942 876 ntTSL 3 BASIC12.63□□□□□ -0.39
KIAA1549Q9HCM3 AL663074.1-201ENST00000436642 299 ntTSL 3 BASIC12.63□□□□□ -0.39
KIAA1549Q9HCM3 MT3-203ENST00000565838 421 ntTSL 3 BASIC12.63□□□□□ -0.39
KIAA1549Q9HCM3 RPL19-207ENST00000582193 792 ntAPPRIS ALT1 TSL 5 BASIC12.63□□□□□ -0.39
KIAA1549Q9HCM3 NUDT2-204ENST00000618590 825 ntAPPRIS P1 TSL 3 BASIC12.63□□□□□ -0.39
KIAA1549Q9HCM3 ZNF596-213ENST00000640035 1163 ntTSL 5 BASIC12.63□□□□□ -0.39
KIAA1549Q9HCM3 AL139424.3-202ENST00000641619 917 ntBASIC12.63□□□□□ -0.39
KIAA1549Q9HCM3 ALDOA-204ENST00000412304 1603 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
KIAA1549Q9HCM3 PRKN-204ENST00000366896 2514 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
KIAA1549Q9HCM3 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
KIAA1549Q9HCM3 TEX44-201ENST00000313965 1383 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
KIAA1549Q9HCM3 AC005840.4-201ENST00000541242 2494 ntBASIC12.63□□□□□ -0.39
KIAA1549Q9HCM3 METTL7B-202ENST00000614691 1368 ntTSL 5 BASIC12.63□□□□□ -0.39
KIAA1549Q9HCM3 OSBPL7-211ENST00000613735 2836 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
KIAA1549Q9HCM3 TRAFD1-201ENST00000257604 3178 ntAPPRIS P2 TSL 2 BASIC12.63□□□□□ -0.39
KIAA1549Q9HCM3 ABR-228ENST00000574437 3196 ntTSL 5 BASIC12.63□□□□□ -0.39
KIAA1549Q9HCM3 BANP-203ENST00000393207 2438 ntTSL 2 BASIC12.63□□□□□ -0.39
KIAA1549Q9HCM3 CELF1-214ENST00000531165 3650 ntTSL 2 BASIC12.63□□□□□ -0.39
KIAA1549Q9HCM3 CAPN1-224ENST00000533129 2792 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
KIAA1549Q9HCM3 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
KIAA1549Q9HCM3 PEX5L-211ENST00000472994 2235 ntAPPRIS ALT2 TSL 2 BASIC12.63□□□□□ -0.39
KIAA1549Q9HCM3 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
KIAA1549Q9HCM3 TAGLN3-201ENST00000273368 1349 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
KIAA1549Q9HCM3 TMEM177-202ENST00000401466 1346 ntAPPRIS P1 TSL 2 BASIC12.63□□□□□ -0.39
KIAA1549Q9HCM3 MED4-201ENST00000258648 2022 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
KIAA1549Q9HCM3 ATAT1-206ENST00000376485 1476 ntAPPRIS ALT1 TSL 5 BASIC12.63□□□□□ -0.39
KIAA1549Q9HCM3 CLEC16A-202ENST00000409552 3365 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
KIAA1549Q9HCM3 ARFIP1-203ENST00000405727 1601 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
KIAA1549Q9HCM3 CSF2RA-219ENST00000501036 1622 ntTSL 2 BASIC12.63□□□□□ -0.39
KIAA1549Q9HCM3 C19orf18-201ENST00000314391 915 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
KIAA1549Q9HCM3 ARMC12-203ENST00000373869 1111 ntTSL 2 BASIC12.63□□□□□ -0.39
KIAA1549Q9HCM3 CXCL12-202ENST00000374426 470 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
KIAA1549Q9HCM3 C1QA-202ENST00000402322 976 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
KIAA1549Q9HCM3 SF3B1-204ENST00000414963 651 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
KIAA1549Q9HCM3 AC243961.1-201ENST00000432559 384 ntTSL 5 BASIC12.63□□□□□ -0.39
KIAA1549Q9HCM3 AC245056.1-201ENST00000437631 384 ntTSL 5 BASIC12.63□□□□□ -0.39
KIAA1549Q9HCM3 AL592301.1-201ENST00000439501 864 ntTSL 3 BASIC12.63□□□□□ -0.39
KIAA1549Q9HCM3 TXNRD2-206ENST00000462330 1129 ntTSL 3 BASIC12.63□□□□□ -0.39
KIAA1549Q9HCM3 AC091179.2-201ENST00000495536 532 ntTSL 3 BASIC12.63□□□□□ -0.39
KIAA1549Q9HCM3 LINC01500-204ENST00000556815 752 ntTSL 3 BASIC12.63□□□□□ -0.39
KIAA1549Q9HCM3 GMFG-209ENST00000600322 622 ntTSL 5 BASIC12.63□□□□□ -0.39
KIAA1549Q9HCM3 TACC3-212ENST00000612220 1756 ntTSL 5 BASIC12.63□□□□□ -0.39
KIAA1549Q9HCM3 SNAP91-205ENST00000439399 4452 ntAPPRIS P2 TSL 5 BASIC12.63□□□□□ -0.39
KIAA1549Q9HCM3 SLC9A7-205ENST00000616978 10024 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
KIAA1549Q9HCM3 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
KIAA1549Q9HCM3 TRMT1-217ENST00000592062 2579 ntAPPRIS P3 TSL 5 BASIC12.63□□□□□ -0.39
KIAA1549Q9HCM3 CCNB2-201ENST00000288207 1556 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
KIAA1549Q9HCM3 POU5F1-204ENST00000471529 1723 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
KIAA1549Q9HCM3 ASPH-214ENST00000519234 2874 ntTSL 5 BASIC12.63□□□□□ -0.39
KIAA1549Q9HCM3 AL928654.5-201ENST00000624831 2501 ntBASIC12.63□□□□□ -0.39
KIAA1549Q9HCM3 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
KIAA1549Q9HCM3 MIR22HG-201ENST00000334146 1383 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
KIAA1549Q9HCM3 FAM96A-203ENST00000557835 1536 ntTSL 2 BASIC12.62□□□□□ -0.39
KIAA1549Q9HCM3 TAGLN2-202ENST00000368096 1603 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
KIAA1549Q9HCM3 TAGLN2-203ENST00000368097 1604 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
KIAA1549Q9HCM3 AC093797.1-201ENST00000411847 1789 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
KIAA1549Q9HCM3 RNF145-202ENST00000424310 3613 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
KIAA1549Q9HCM3 ZNF674-AS1-201ENST00000421685 2078 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
KIAA1549Q9HCM3 ELN-203ENST00000320492 2991 ntAPPRIS ALT2 TSL 2 BASIC12.62□□□□□ -0.39
KIAA1549Q9HCM3 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
KIAA1549Q9HCM3 MT1H-201ENST00000332374 397 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
KIAA1549Q9HCM3 TNNT2-203ENST00000367315 1083 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
KIAA1549Q9HCM3 ERP29P1-201ENST00000442902 706 ntBASIC12.62□□□□□ -0.39
KIAA1549Q9HCM3 LYRM4-206ENST00000468929 1168 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
KIAA1549Q9HCM3 AC130709.1-201ENST00000484779 1212 ntBASIC12.62□□□□□ -0.39
KIAA1549Q9HCM3 SLC25A15P3-201ENST00000505530 290 ntBASIC12.62□□□□□ -0.39
KIAA1549Q9HCM3 AC105254.1-201ENST00000507782 621 ntTSL 4 BASIC12.62□□□□□ -0.39
KIAA1549Q9HCM3 PTK2-225ENST00000520892 571 ntTSL 4 BASIC12.62□□□□□ -0.39
KIAA1549Q9HCM3 ADM-203ENST00000525063 867 ntAPPRIS P1 TSL 3 BASIC12.62□□□□□ -0.39
KIAA1549Q9HCM3 ALG10B-203ENST00000551464 571 ntTSL 3 BASIC12.62□□□□□ -0.39
KIAA1549Q9HCM3 DNM1P30-201ENST00000563586 452 ntBASIC12.62□□□□□ -0.39
KIAA1549Q9HCM3 KRT18P8-201ENST00000581937 1246 ntBASIC12.62□□□□□ -0.39
KIAA1549Q9HCM3 AC011500.3-201ENST00000594676 647 ntTSL 4 BASIC12.62□□□□□ -0.39
KIAA1549Q9HCM3 TOMM7-207ENST00000621567 241 ntAPPRIS ALT1 TSL 5 BASIC12.62□□□□□ -0.39
KIAA1549Q9HCM3 SLC4A1-206ENST00000631130 1433 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
KIAA1549Q9HCM3 AL353803.2-201ENST00000436510 1846 ntTSL 5 BASIC12.62□□□□□ -0.39
KIAA1549Q9HCM3 SNX14-203ENST00000369627 3111 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
KIAA1549Q9HCM3 ALG3-205ENST00000445626 1533 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
KIAA1549Q9HCM3 AC090502.4-201ENST00000551714 1386 ntBASIC12.62□□□□□ -0.39
KIAA1549Q9HCM3 GP6-202ENST00000333884 2210 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
KIAA1549Q9HCM3 SLC4A3-202ENST00000317151 4069 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
KIAA1549Q9HCM3 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
KIAA1549Q9HCM3 LIMS4-204ENST00000632897 1460 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
KIAA1549Q9HCM3 FXYD3-208ENST00000604404 1322 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
KIAA1549Q9HCM3 DMTN-201ENST00000265800 2554 ntTSL 5 BASIC12.62□□□□□ -0.39
KIAA1549Q9HCM3 DMTN-207ENST00000517305 2551 ntTSL 5 BASIC12.62□□□□□ -0.39
KIAA1549Q9HCM3 HTR7-202ENST00000336152 3126 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
KIAA1549Q9HCM3 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC12.62□□□□□ -0.39
KIAA1549Q9HCM3 ANO10-203ENST00000396091 2419 ntTSL 2 BASIC12.62□□□□□ -0.39
KIAA1549Q9HCM3 NEO1-207ENST00000560262 4315 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
KIAA1549Q9HCM3 C7orf57-201ENST00000348904 2125 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
KIAA1549Q9HCM3 GOLGA8IP-202ENST00000611635 2100 ntBASIC12.62□□□□□ -0.39
KIAA1549Q9HCM3 ERICH1-206ENST00000522706 1551 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
KIAA1549Q9HCM3 SEC61B-201ENST00000223641 545 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
KIAA1549Q9HCM3 MUC1-203ENST00000342482 537 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Retrieved 100 of 98,524 protein–RNA pairs in 55.8 ms