Protein–RNA interactions for Protein: Q8WWV3

RTN4IP1, Reticulon-4-interacting protein 1, mitochondrial, humanhuman

Predicted RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4IP1Q8WWV3 NTNG1-204ENST00000370067 4628 ntTSL 5 BASIC12.18□□□□□ -0.46
RTN4IP1Q8WWV3 NOL9-201ENST00000377705 6649 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
RTN4IP1Q8WWV3 PSIP1-204ENST00000380738 3364 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
RTN4IP1Q8WWV3 ZNF202-206ENST00000529691 3384 ntAPPRIS P1 TSL 2 BASIC12.18□□□□□ -0.46
RTN4IP1Q8WWV3 TMEM63B-202ENST00000323267 3198 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
RTN4IP1Q8WWV3 AL139193.2-201ENST00000553712 1954 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
RTN4IP1Q8WWV3 ACSM2A-202ENST00000396104 2734 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
RTN4IP1Q8WWV3 FBLIM1-203ENST00000375771 3498 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
RTN4IP1Q8WWV3 FER1L4-204ENST00000430275 3281 ntTSL 5 BASIC12.17□□□□□ -0.46
RTN4IP1Q8WWV3 SLC13A5-202ENST00000381074 1738 ntTSL 2 BASIC12.17□□□□□ -0.46
RTN4IP1Q8WWV3 ARMC8-220ENST00000489213 1714 ntTSL 5 BASIC12.17□□□□□ -0.46
RTN4IP1Q8WWV3 SLC13A5-208ENST00000573648 1723 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
RTN4IP1Q8WWV3 UBE3A-209ENST00000625778 3217 ntTSL 5 BASIC12.17□□□□□ -0.46
RTN4IP1Q8WWV3 COMT-205ENST00000406520 1339 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
RTN4IP1Q8WWV3 LINC02135-201ENST00000599486 2065 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
RTN4IP1Q8WWV3 AC012349.1-201ENST00000518662 2643 ntTSL 2 BASIC12.17□□□□□ -0.46
RTN4IP1Q8WWV3 REM1-201ENST00000201979 1665 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
RTN4IP1Q8WWV3 PLA2G4F-202ENST00000397272 5587 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
RTN4IP1Q8WWV3 PTK2-202ENST00000395218 4415 ntTSL 5 BASIC12.17□□□□□ -0.46
RTN4IP1Q8WWV3 KIAA0513-202ENST00000538274 7381 ntTSL 2 BASIC12.17□□□□□ -0.46
RTN4IP1Q8WWV3 DNAJC13-201ENST00000260818 7730 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
RTN4IP1Q8WWV3 KIRREL2-203ENST00000360202 2942 ntAPPRIS P4 TSL 1 (best) BASIC12.17□□□□□ -0.46
RTN4IP1Q8WWV3 C7orf65-201ENST00000408988 2911 ntTSL 2 BASIC12.17□□□□□ -0.46
RTN4IP1Q8WWV3 RGS9-201ENST00000262406 2375 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
RTN4IP1Q8WWV3 SMAGP-203ENST00000603798 2350 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
RTN4IP1Q8WWV3 NDUFB7-201ENST00000215565 531 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
RTN4IP1Q8WWV3 FGF6-201ENST00000228837 743 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
RTN4IP1Q8WWV3 C12orf10-201ENST00000267103 1192 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
RTN4IP1Q8WWV3 NCR1-201ENST00000291890 1155 ntAPPRIS P3 TSL 5 BASIC12.17□□□□□ -0.46
RTN4IP1Q8WWV3 TOMM5-201ENST00000321301 751 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
RTN4IP1Q8WWV3 IL32-202ENST00000325568 1105 ntAPPRIS P4 TSL 1 (best) BASIC12.17□□□□□ -0.46
RTN4IP1Q8WWV3 NCR1-202ENST00000338835 973 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
RTN4IP1Q8WWV3 NCR1-203ENST00000350790 739 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
RTN4IP1Q8WWV3 IL32-203ENST00000382213 880 ntAPPRIS ALT2 TSL 3 BASIC12.17□□□□□ -0.46
RTN4IP1Q8WWV3 AL513303.2-201ENST00000413339 536 ntTSL 2 BASIC12.17□□□□□ -0.46
RTN4IP1Q8WWV3 AC099552.2-201ENST00000418523 456 ntTSL 3 BASIC12.17□□□□□ -0.46
RTN4IP1Q8WWV3 AC105940.2-201ENST00000421055 380 ntTSL 3 BASIC12.17□□□□□ -0.46
RTN4IP1Q8WWV3 AL354761.2-202ENST00000430816 546 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
RTN4IP1Q8WWV3 C14orf178-202ENST00000439131 632 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
RTN4IP1Q8WWV3 AC245100.3-201ENST00000441281 285 ntBASIC12.17□□□□□ -0.46
RTN4IP1Q8WWV3 SIRPB2-203ENST00000444444 884 ntTSL 2 BASIC12.17□□□□□ -0.46
RTN4IP1Q8WWV3 RPSAP31-202ENST00000445165 716 ntTSL 2 BASIC12.17□□□□□ -0.46
RTN4IP1Q8WWV3 FDPS-203ENST00000447866 1256 ntAPPRIS ALT1 TSL 5 BASIC12.17□□□□□ -0.46
RTN4IP1Q8WWV3 AC084864.1-201ENST00000496217 305 ntTSL 3 BASIC12.17□□□□□ -0.46
RTN4IP1Q8WWV3 AC106760.1-201ENST00000508690 800 ntBASIC12.17□□□□□ -0.46
RTN4IP1Q8WWV3 CLRN2-201ENST00000511148 823 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
RTN4IP1Q8WWV3 FUZ-207ENST00000526575 482 ntTSL 4 BASIC12.17□□□□□ -0.46
RTN4IP1Q8WWV3 AC132938.2-201ENST00000579188 680 ntBASIC12.17□□□□□ -0.46
RTN4IP1Q8WWV3 RN7SL48P-201ENST00000579283 293 ntBASIC12.17□□□□□ -0.46
RTN4IP1Q8WWV3 PRCD-204ENST00000586148 630 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
RTN4IP1Q8WWV3 AC138474.1-201ENST00000586630 523 ntTSL 3 BASIC12.17□□□□□ -0.46
RTN4IP1Q8WWV3 CECR7-204ENST00000609932 568 ntTSL 2 BASIC12.17□□□□□ -0.46
RTN4IP1Q8WWV3 AL591163.1-201ENST00000641757 987 ntBASIC12.17□□□□□ -0.46
RTN4IP1Q8WWV3 ADCYAP1R1-201ENST00000304166 6487 ntAPPRIS P3 TSL 2 BASIC12.17□□□□□ -0.46
RTN4IP1Q8WWV3 GOPC-202ENST00000368498 4450 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
RTN4IP1Q8WWV3 KRT17P5-203ENST00000445433 2333 ntTSL 2 BASIC12.17□□□□□ -0.46
RTN4IP1Q8WWV3 PLA2G3-201ENST00000215885 2697 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
RTN4IP1Q8WWV3 BCAR1-208ENST00000542031 2846 ntAPPRIS ALT2 TSL 2 BASIC12.17□□□□□ -0.46
RTN4IP1Q8WWV3 CBX6-201ENST00000216083 3191 ntAPPRIS ALT2 TSL 2 BASIC12.17□□□□□ -0.46
RTN4IP1Q8WWV3 HFE-202ENST00000317896 1922 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
RTN4IP1Q8WWV3 AOC1-201ENST00000360937 2649 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
RTN4IP1Q8WWV3 VASH2-202ENST00000366964 2960 ntTSL 5 BASIC12.17□□□□□ -0.46
RTN4IP1Q8WWV3 CCDC51-204ENST00000442740 1554 ntTSL 3 BASIC12.17□□□□□ -0.46
RTN4IP1Q8WWV3 SLC12A8-207ENST00000469902 2989 ntAPPRIS P1 TSL 2 BASIC12.17□□□□□ -0.46
RTN4IP1Q8WWV3 INTS11-248ENST00000545578 2263 ntTSL 2 BASIC12.17□□□□□ -0.46
RTN4IP1Q8WWV3 MCF2L-204ENST00000375608 3648 ntTSL 5 BASIC12.17□□□□□ -0.46
RTN4IP1Q8WWV3 TBP-206ENST00000540980 1701 ntAPPRIS ALT2 TSL 2 BASIC12.17□□□□□ -0.46
RTN4IP1Q8WWV3 LRP8-203ENST00000354412 2553 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
RTN4IP1Q8WWV3 IGHG4-202ENST00000641978 2597 ntAPPRIS P1 BASIC12.17□□□□□ -0.46
RTN4IP1Q8WWV3 PI4KB-203ENST00000368874 3934 ntAPPRIS ALT1 TSL 1 (best) BASIC12.17□□□□□ -0.46
RTN4IP1Q8WWV3 CDK5RAP3-201ENST00000338399 1866 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
RTN4IP1Q8WWV3 SDR16C5-202ENST00000396721 2399 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
RTN4IP1Q8WWV3 NFIX-208ENST00000587260 1537 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
RTN4IP1Q8WWV3 NLRX1-201ENST00000292199 3744 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
RTN4IP1Q8WWV3 OLFML2A-203ENST00000373580 6425 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
RTN4IP1Q8WWV3 C7orf72-201ENST00000297001 2028 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
RTN4IP1Q8WWV3 KDM5C-208ENST00000452825 6096 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
RTN4IP1Q8WWV3 PKP1-203ENST00000367324 5384 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
RTN4IP1Q8WWV3 KIF1A-213ENST00000498729 9221 ntTSL 5 BASIC12.16□□□□□ -0.46
RTN4IP1Q8WWV3 AL138709.1-201ENST00000614840 1693 ntBASIC12.16□□□□□ -0.46
RTN4IP1Q8WWV3 CYTH1-201ENST00000361101 3311 ntAPPRIS ALT1 TSL 1 (best) BASIC12.16□□□□□ -0.46
RTN4IP1Q8WWV3 CYTH1-202ENST00000446868 3311 ntAPPRIS ALT1 TSL 5 BASIC12.16□□□□□ -0.46
RTN4IP1Q8WWV3 FLAD1-206ENST00000368432 1839 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
RTN4IP1Q8WWV3 AURKC-203ENST00000448930 1318 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
RTN4IP1Q8WWV3 TOX2-202ENST00000358131 2605 ntTSL 2 BASIC12.16□□□□□ -0.46
RTN4IP1Q8WWV3 ACADM-202ENST00000370841 2619 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
RTN4IP1Q8WWV3 CBX3-201ENST00000337620 2128 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
RTN4IP1Q8WWV3 CSNK1A1P1-201ENST00000430593 2147 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
RTN4IP1Q8WWV3 IL12RB1-203ENST00000593993 2782 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
RTN4IP1Q8WWV3 FGGY-203ENST00000371212 1640 ntTSL 2 BASIC12.16□□□□□ -0.46
RTN4IP1Q8WWV3 ZC3H18-201ENST00000301011 3729 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
RTN4IP1Q8WWV3 SGMS1-202ENST00000361781 3744 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
RTN4IP1Q8WWV3 HPS1-215ENST00000613394 3714 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
RTN4IP1Q8WWV3 GALC-201ENST00000261304 3883 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
RTN4IP1Q8WWV3 USP17L2-201ENST00000333796 1910 ntAPPRIS P1 BASIC12.16□□□□□ -0.46
RTN4IP1Q8WWV3 CLIC5-208ENST00000544153 2051 ntTSL 2 BASIC12.16□□□□□ -0.46
RTN4IP1Q8WWV3 NFE2L1-218ENST00000583378 2051 ntTSL 5 BASIC12.16□□□□□ -0.46
RTN4IP1Q8WWV3 CSF2-201ENST00000296871 787 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
RTN4IP1Q8WWV3 UEVLD-201ENST00000300038 995 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
RTN4IP1Q8WWV3 NCR3-201ENST00000340027 1042 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
Retrieved 100 of 98,524 protein–RNA pairs in 53.5 ms