Protein–RNA interactions for Protein: Q86X40

LRRC28, Leucine-rich repeat-containing protein 28, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28Q86X40 FLAD1-206ENST00000368432 1839 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
LRRC28Q86X40 ZNF829-201ENST00000391711 1805 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
LRRC28Q86X40 TBP-206ENST00000540980 1701 ntAPPRIS ALT2 TSL 2 BASIC12.88□□□□□ -0.35
LRRC28Q86X40 HMGCL-203ENST00000374490 1600 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
LRRC28Q86X40 FHOD3-206ENST00000590592 4869 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
LRRC28Q86X40 KCNJ9-201ENST00000368088 4170 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
LRRC28Q86X40 ARFIP1-202ENST00000356064 1302 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
LRRC28Q86X40 EPHA5-203ENST00000432638 3662 ntTSL 5 BASIC12.87□□□□□ -0.35
LRRC28Q86X40 LHX6-210ENST00000559895 3587 ntTSL 2 BASIC12.87□□□□□ -0.35
LRRC28Q86X40 SHCBP1-201ENST00000303383 3461 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
LRRC28Q86X40 UQCRFS1-201ENST00000304863 3475 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
LRRC28Q86X40 GIPR-205ENST00000590918 3289 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
LRRC28Q86X40 CPT1C-202ENST00000323446 2783 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
LRRC28Q86X40 FAM9C-205ENST00000542843 5858 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
LRRC28Q86X40 DCST2-202ENST00000368424 2392 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
LRRC28Q86X40 MCF2L-204ENST00000375608 3648 ntTSL 5 BASIC12.87□□□□□ -0.35
LRRC28Q86X40 FCRL6-201ENST00000321935 1997 ntAPPRIS ALT2 TSL 2 BASIC12.87□□□□□ -0.35
LRRC28Q86X40 RNASEH1-201ENST00000315212 1887 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
LRRC28Q86X40 GDPGP1-202ENST00000558017 5323 ntAPPRIS P1 TSL 2 BASIC12.87□□□□□ -0.35
LRRC28Q86X40 C1QTNF1-204ENST00000392445 2833 ntAPPRIS P1 TSL 2 BASIC12.87□□□□□ -0.35
LRRC28Q86X40 KIAA1217-203ENST00000376452 6052 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
LRRC28Q86X40 STX16-207ENST00000371141 4937 ntAPPRIS P3 TSL 2 BASIC12.87□□□□□ -0.35
LRRC28Q86X40 TBCEL-205ENST00000529397 1375 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
LRRC28Q86X40 AL118506.1-201ENST00000601296 3082 ntBASIC12.87□□□□□ -0.35
LRRC28Q86X40 ADCY6-201ENST00000307885 6464 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
LRRC28Q86X40 CACNG5-201ENST00000307139 926 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
LRRC28Q86X40 BEX3-203ENST00000372635 805 ntAPPRIS P1 TSL 2 BASIC12.87□□□□□ -0.35
LRRC28Q86X40 SELENOM-201ENST00000400299 694 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
LRRC28Q86X40 PGF-202ENST00000405431 666 ntTSL 5 BASIC12.87□□□□□ -0.35
LRRC28Q86X40 RPL28-203ENST00000428193 573 ntTSL 2 BASIC12.87□□□□□ -0.35
LRRC28Q86X40 RPL28-204ENST00000431533 590 ntTSL 2 BASIC12.87□□□□□ -0.35
LRRC28Q86X40 ATP5G2P4-201ENST00000442175 420 ntBASIC12.87□□□□□ -0.35
LRRC28Q86X40 AC114812.1-204ENST00000449669 728 ntBASIC12.87□□□□□ -0.35
LRRC28Q86X40 LCN10-206ENST00000527229 615 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
LRRC28Q86X40 HILS1-202ENST00000545329 423 ntBASIC12.87□□□□□ -0.35
LRRC28Q86X40 RPL28-207ENST00000558815 616 ntTSL 2 BASIC12.87□□□□□ -0.35
LRRC28Q86X40 SNHG15-207ENST00000582727 1039 ntTSL 2 BASIC12.87□□□□□ -0.35
LRRC28Q86X40 GADD45B-204ENST00000587345 765 ntTSL 2 BASIC12.87□□□□□ -0.35
LRRC28Q86X40 COX6B1-204ENST00000592141 660 ntAPPRIS P1 TSL 3 BASIC12.87□□□□□ -0.35
LRRC28Q86X40 AL359881.2-201ENST00000602973 570 ntBASIC12.87□□□□□ -0.35
LRRC28Q86X40 AL512343.1-201ENST00000605837 169 ntBASIC12.87□□□□□ -0.35
LRRC28Q86X40 AC017083.2-201ENST00000608069 979 ntBASIC12.87□□□□□ -0.35
LRRC28Q86X40 ZC3H14-204ENST00000336693 2007 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
LRRC28Q86X40 GPR84-202ENST00000551809 2041 ntAPPRIS P1 BASIC12.87□□□□□ -0.35
LRRC28Q86X40 BRSK2-207ENST00000528710 3528 ntTSL 2 BASIC12.87□□□□□ -0.35
LRRC28Q86X40 NECAP2-202ENST00000443980 1929 ntTSL 2 BASIC12.87□□□□□ -0.35
LRRC28Q86X40 AC125611.4-201ENST00000553259 4166 ntTSL 2 BASIC12.87□□□□□ -0.35
LRRC28Q86X40 SMOC2-202ENST00000356284 3117 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
LRRC28Q86X40 LRRC32-201ENST00000260061 4207 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
LRRC28Q86X40 RNF14-201ENST00000347642 4213 ntAPPRIS P1 TSL 2 BASIC12.87□□□□□ -0.35
LRRC28Q86X40 SUPT7L-203ENST00000405491 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC12.87□□□□□ -0.35
LRRC28Q86X40 MLF1-217ENST00000619577 2290 ntTSL 5 BASIC12.87□□□□□ -0.35
LRRC28Q86X40 LINC01648-201ENST00000445180 1519 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
LRRC28Q86X40 MTMR3-204ENST00000401950 6018 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
LRRC28Q86X40 C12orf73-207ENST00000549478 1446 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
LRRC28Q86X40 PTPN20-206ENST00000395722 1995 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
LRRC28Q86X40 TNS2-203ENST00000379902 4737 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
LRRC28Q86X40 DCHS1-201ENST00000299441 10765 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
LRRC28Q86X40 BRSK1-206ENST00000590333 2977 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
LRRC28Q86X40 AC022007.1-201ENST00000383808 1897 ntTSL 2 BASIC12.87□□□□□ -0.35
LRRC28Q86X40 MTCL1-202ENST00000359865 6093 ntAPPRIS P2 TSL 2 BASIC12.87□□□□□ -0.35
LRRC28Q86X40 USP51-201ENST00000500968 4407 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
LRRC28Q86X40 OS9-206ENST00000435406 2346 ntTSL 2 BASIC12.87□□□□□ -0.35
LRRC28Q86X40 KIAA1614-201ENST00000367587 3309 ntTSL 2 BASIC12.87□□□□□ -0.35
LRRC28Q86X40 MEX3B-202ENST00000558133 4333 ntBASIC12.87□□□□□ -0.35
LRRC28Q86X40 ITGB8-201ENST00000222573 8751 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
LRRC28Q86X40 GEM-201ENST00000297596 2208 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
LRRC28Q86X40 CYP2E1-201ENST00000252945 1667 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
LRRC28Q86X40 SNUPN-206ENST00000564675 1682 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
LRRC28Q86X40 ARAP1-201ENST00000334211 4942 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
LRRC28Q86X40 CCDC110-209ENST00000510617 2592 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
LRRC28Q86X40 AC040174.1-201ENST00000563003 2571 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
LRRC28Q86X40 VCP-201ENST00000358901 4370 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
LRRC28Q86X40 C7orf72-201ENST00000297001 2028 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
LRRC28Q86X40 OTUD4-201ENST00000447906 3829 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
LRRC28Q86X40 INTS5-201ENST00000330574 3285 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
LRRC28Q86X40 BEGAIN-212ENST00000637716 3259 ntAPPRIS P5 TSL 5 BASIC12.86□□□□□ -0.35
LRRC28Q86X40 FKBP9-214ENST00000538336 3621 ntTSL 2 BASIC12.86□□□□□ -0.35
LRRC28Q86X40 HIPK1-205ENST00000369558 8157 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
LRRC28Q86X40 POLM-201ENST00000242248 2631 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
LRRC28Q86X40 WASHC5-202ENST00000517845 3667 ntTSL 2 BASIC12.86□□□□□ -0.35
LRRC28Q86X40 SMAD2-212ENST00000591214 1714 ntTSL 2 BASIC12.86□□□□□ -0.35
LRRC28Q86X40 ATN1-201ENST00000356654 4351 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
LRRC28Q86X40 SEPT7-202ENST00000399034 4399 ntTSL 5 BASIC12.86□□□□□ -0.35
LRRC28Q86X40 AP1B1-201ENST00000317368 3903 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
LRRC28Q86X40 LHB-201ENST00000221421 514 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
LRRC28Q86X40 NINJ2-201ENST00000305108 1252 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
LRRC28Q86X40 LBX2-201ENST00000341396 886 ntTSL 3 BASIC12.86□□□□□ -0.35
LRRC28Q86X40 LRRC30-201ENST00000383467 923 ntAPPRIS P1 BASIC12.86□□□□□ -0.35
LRRC28Q86X40 BLVRA-202ENST00000402924 1161 ntAPPRIS P1 TSL 2 BASIC12.86□□□□□ -0.35
LRRC28Q86X40 DHDDS-206ENST00000427245 868 ntTSL 5 BASIC12.86□□□□□ -0.35
LRRC28Q86X40 AC234783.1-201ENST00000441761 496 ntBASIC12.86□□□□□ -0.35
LRRC28Q86X40 BCRP2-202ENST00000447763 634 ntBASIC12.86□□□□□ -0.35
LRRC28Q86X40 AL121845.2-201ENST00000467211 252 ntAPPRIS P1 TSL 3 BASIC12.86□□□□□ -0.35
LRRC28Q86X40 KRT18P25-201ENST00000508931 1278 ntBASIC12.86□□□□□ -0.35
LRRC28Q86X40 BCRP6-201ENST00000510112 632 ntBASIC12.86□□□□□ -0.35
LRRC28Q86X40 BCRP7-201ENST00000511549 544 ntBASIC12.86□□□□□ -0.35
LRRC28Q86X40 SBSN-202ENST00000518157 957 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
LRRC28Q86X40 IGHV3-71-201ENST00000523324 359 ntBASIC12.86□□□□□ -0.35
LRRC28Q86X40 OVOL1-AS1-202ENST00000532454 494 ntTSL 2 BASIC12.86□□□□□ -0.35
Retrieved 100 of 98,524 protein–RNA pairs in 99.6 ms