Protein–RNA interactions for Protein: Q7L0R7

RNF44, RING finger protein 44, humanhuman

Predictions only

Length 432 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF44Q7L0R7 NCR3-202ENST00000376071 541 ntTSL 5 BASIC13.79□□□□□ -0.2
RNF44Q7L0R7 LCMT1-202ENST00000380966 989 ntTSL 2 BASIC13.79□□□□□ -0.2
RNF44Q7L0R7 PUS10-202ENST00000398658 1227 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
RNF44Q7L0R7 OGFR-AS1-201ENST00000431361 668 ntTSL 2 BASIC13.79□□□□□ -0.2
RNF44Q7L0R7 AC092580.1-201ENST00000433998 658 ntBASIC13.79□□□□□ -0.2
RNF44Q7L0R7 CDKN2AIP-205ENST00000510928 860 ntTSL 2 BASIC13.79□□□□□ -0.2
RNF44Q7L0R7 NEU3-202ENST00000526068 431 ntTSL 2 BASIC13.79□□□□□ -0.2
RNF44Q7L0R7 AL161670.2-201ENST00000557650 1227 ntBASIC13.79□□□□□ -0.2
RNF44Q7L0R7 AC140658.4-201ENST00000561990 352 ntBASIC13.79□□□□□ -0.2
RNF44Q7L0R7 AC243967.2-201ENST00000601409 567 ntTSL 4 BASIC13.79□□□□□ -0.2
RNF44Q7L0R7 BX537318.1-201ENST00000608290 1207 ntTSL 5 BASIC13.79□□□□□ -0.2
RNF44Q7L0R7 ALKBH2-208ENST00000619381 895 ntTSL 5 BASIC13.79□□□□□ -0.2
RNF44Q7L0R7 AL358215.2-201ENST00000639693 946 ntTSL 5 BASIC13.79□□□□□ -0.2
RNF44Q7L0R7 SMIM14-201ENST00000295958 6483 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
RNF44Q7L0R7 PODN-202ENST00000371500 3287 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
RNF44Q7L0R7 DBR1-201ENST00000260803 2666 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
RNF44Q7L0R7 GRK6-203ENST00000393576 2792 ntTSL 5 BASIC13.79□□□□□ -0.2
RNF44Q7L0R7 CEP126-201ENST00000263468 7039 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
RNF44Q7L0R7 SVOPL-201ENST00000288513 1413 ntTSL 2 BASIC13.79□□□□□ -0.2
RNF44Q7L0R7 ODF2L-204ENST00000370566 2155 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
RNF44Q7L0R7 SUPT4H1-201ENST00000225504 1489 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
RNF44Q7L0R7 B3GNT7-201ENST00000287590 3706 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
RNF44Q7L0R7 WIZ-203ENST00000545156 4466 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
RNF44Q7L0R7 UPB1-201ENST00000326010 2290 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
RNF44Q7L0R7 USP9X-202ENST00000378308 8371 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
RNF44Q7L0R7 NXPH3-202ENST00000513748 1530 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
RNF44Q7L0R7 LINC00665-205ENST00000585356 1557 ntTSL 2 BASIC13.79□□□□□ -0.2
RNF44Q7L0R7 PTENP1-202ENST00000532280 3996 ntBASIC13.79□□□□□ -0.2
RNF44Q7L0R7 AC117489.1-201ENST00000625169 3217 ntBASIC13.79□□□□□ -0.2
RNF44Q7L0R7 LINC01165-201ENST00000445190 1623 ntBASIC13.79□□□□□ -0.2
RNF44Q7L0R7 ABI2-215ENST00000430418 1676 ntTSL 5 BASIC13.79□□□□□ -0.2
RNF44Q7L0R7 DNM3-202ENST00000367731 7613 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
RNF44Q7L0R7 ADRB2-201ENST00000305988 3443 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
RNF44Q7L0R7 PAX6-202ENST00000379107 2579 ntAPPRIS P4 TSL 5 BASIC13.78□□□□□ -0.2
RNF44Q7L0R7 UCKL1-AS1-201ENST00000623569 3602 ntBASIC13.78□□□□□ -0.2
RNF44Q7L0R7 ANXA9-201ENST00000368947 1826 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
RNF44Q7L0R7 SLC26A1-201ENST00000361661 3660 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
RNF44Q7L0R7 ABAT-203ENST00000425191 1923 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
RNF44Q7L0R7 CEP76-201ENST00000262127 2939 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
RNF44Q7L0R7 PPT1-205ENST00000449045 1957 ntTSL 2 BASIC13.78□□□□□ -0.2
RNF44Q7L0R7 ASTN2-206ENST00000361477 4001 ntTSL 5 BASIC13.78□□□□□ -0.2
RNF44Q7L0R7 TTC8-203ENST00000346301 2058 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
RNF44Q7L0R7 AL365205.1-204ENST00000359201 2098 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
RNF44Q7L0R7 CDKN1A-208ENST00000615513 2102 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
RNF44Q7L0R7 SLC38A5-212ENST00000619100 2100 ntTSL 2 BASIC13.78□□□□□ -0.2
RNF44Q7L0R7 SLC38A5-214ENST00000622196 2100 ntTSL 5 BASIC13.78□□□□□ -0.2
RNF44Q7L0R7 MGRN1-203ENST00000415496 6405 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
RNF44Q7L0R7 SGTB-201ENST00000381007 5469 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
RNF44Q7L0R7 TTC29-208ENST00000513335 2226 ntAPPRIS ALT2 TSL 2 BASIC13.78□□□□□ -0.2
RNF44Q7L0R7 RPUSD2-201ENST00000315616 2358 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
RNF44Q7L0R7 NCOR2-202ENST00000404121 7175 ntTSL 5 BASIC13.78□□□□□ -0.2
RNF44Q7L0R7 MED29-204ENST00000599213 2490 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
RNF44Q7L0R7 SYCE2-201ENST00000293695 1231 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
RNF44Q7L0R7 BCYRN1-201ENST00000418539 200 ntBASIC13.78□□□□□ -0.2
RNF44Q7L0R7 AC114488.1-201ENST00000435872 591 ntTSL 3 BASIC13.78□□□□□ -0.2
RNF44Q7L0R7 HVCN1-203ENST00000439744 1215 ntTSL 2 BASIC13.78□□□□□ -0.2
RNF44Q7L0R7 DNAJC27-AS1-207ENST00000451291 488 ntTSL 3 BASIC13.78□□□□□ -0.2
RNF44Q7L0R7 TNFRSF14-AS1-206ENST00000452793 569 ntTSL 3 BASIC13.78□□□□□ -0.2
RNF44Q7L0R7 CHL1-AS2-203ENST00000452919 726 ntTSL 2 BASIC13.78□□□□□ -0.2
RNF44Q7L0R7 AC024681.1-201ENST00000521917 487 ntBASIC13.78□□□□□ -0.2
RNF44Q7L0R7 MIR3619-201ENST00000579667 83 ntBASIC13.78□□□□□ -0.2
RNF44Q7L0R7 ACP7-202ENST00000594229 1149 ntTSL 5 BASIC13.78□□□□□ -0.2
RNF44Q7L0R7 L34079.1-201ENST00000594374 393 ntAPPRIS P1 TSL 3 BASIC13.78□□□□□ -0.2
RNF44Q7L0R7 KLK3-207ENST00000595952 969 ntTSL 3 BASIC13.78□□□□□ -0.2
RNF44Q7L0R7 RPS5-209ENST00000601521 1203 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
RNF44Q7L0R7 ITGA9-AS1-213ENST00000614028 913 ntTSL 5 BASIC13.78□□□□□ -0.2
RNF44Q7L0R7 AP001505.2-201ENST00000616815 443 ntBASIC13.78□□□□□ -0.2
RNF44Q7L0R7 LINC00854-216ENST00000636331 718 ntAPPRIS P5 TSL 5 BASIC13.78□□□□□ -0.2
RNF44Q7L0R7 AC138627.1-207ENST00000641560 1006 ntBASIC13.78□□□□□ -0.2
RNF44Q7L0R7 FLNC-201ENST00000325888 9188 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
RNF44Q7L0R7 NICN1-201ENST00000273598 2616 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
RNF44Q7L0R7 FANCG-201ENST00000378643 2631 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
RNF44Q7L0R7 COLCA2-202ENST00000526216 1332 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
RNF44Q7L0R7 TMEM106A-202ENST00000541594 1330 ntTSL 2 BASIC13.78□□□□□ -0.2
RNF44Q7L0R7 JMJD6-203ENST00000445478 5303 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
RNF44Q7L0R7 ACSM2A-202ENST00000396104 2734 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
RNF44Q7L0R7 ASCC3-207ENST00000522650 2828 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
RNF44Q7L0R7 MRGPRX4-201ENST00000314254 1444 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
RNF44Q7L0R7 PCMTD1-201ENST00000360540 4252 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
RNF44Q7L0R7 GET4-202ENST00000407192 4356 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
RNF44Q7L0R7 F2RL1-201ENST00000296677 2914 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
RNF44Q7L0R7 ZNRD1ASP-217ENST00000437417 1497 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
RNF44Q7L0R7 AC023908.3-201ENST00000564211 3047 ntBASIC13.78□□□□□ -0.2
RNF44Q7L0R7 AC114490.1-201ENST00000417456 3163 ntTSL 2 BASIC13.78□□□□□ -0.2
RNF44Q7L0R7 ACTG1P17-202ENST00000560958 1662 ntTSL 2 BASIC13.78□□□□□ -0.2
RNF44Q7L0R7 YIPF6-204ENST00000462683 6741 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
RNF44Q7L0R7 SMAD2-212ENST00000591214 1714 ntTSL 2 BASIC13.78□□□□□ -0.2
RNF44Q7L0R7 RASGEF1B-202ENST00000335927 1756 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
RNF44Q7L0R7 ATRN-202ENST00000446916 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
RNF44Q7L0R7 PRIMPOL-211ENST00000515774 2007 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
RNF44Q7L0R7 CCND3-201ENST00000372987 2233 ntTSL 2 BASIC13.78□□□□□ -0.2
RNF44Q7L0R7 CACNA1G-230ENST00000514717 6699 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
RNF44Q7L0R7 ANKLE2-210ENST00000542657 2446 ntTSL 2 BASIC13.78□□□□□ -0.2
RNF44Q7L0R7 AIFM2-202ENST00000373248 2570 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
RNF44Q7L0R7 DCUN1D2-201ENST00000332592 2626 ntTSL 2 BASIC13.77□□□□□ -0.2
RNF44Q7L0R7 WASH2P-202ENST00000538033 2800 ntTSL 2 BASIC13.77□□□□□ -0.2
RNF44Q7L0R7 GPRC5C-202ENST00000392627 2988 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.2
RNF44Q7L0R7 FGFR3-201ENST00000260795 4132 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.2
RNF44Q7L0R7 NFATC4-219ENST00000555167 4364 ntTSL 1 (best) BASIC13.77□□□□□ -0.2
RNF44Q7L0R7 PSMC1-201ENST00000261303 4448 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 69.2 ms