Protein–RNA interactions for Protein: Q643R3

LPCAT4, Lysophospholipid acyltransferase LPCAT4, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT4Q643R3 AC040169.1-201ENST00000565382 521 ntBASIC13.56□□□□□ -0.24
LPCAT4Q643R3 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC13.56□□□□□ -0.24
LPCAT4Q643R3 MIR4453-201ENST00000584019 89 ntBASIC13.56□□□□□ -0.24
LPCAT4Q643R3 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC13.56□□□□□ -0.24
LPCAT4Q643R3 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
LPCAT4Q643R3 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC13.56□□□□□ -0.24
LPCAT4Q643R3 AC105339.1-204ENST00000636249 355 ntBASIC13.56□□□□□ -0.24
LPCAT4Q643R3 LAIR1-204ENST00000391743 2735 ntAPPRIS ALT2 TSL 2 BASIC13.56□□□□□ -0.24
LPCAT4Q643R3 SNCAIP-222ENST00000542191 2729 ntTSL 5 BASIC13.56□□□□□ -0.24
LPCAT4Q643R3 GOLGA8IP-201ENST00000340249 1899 ntTSL 2 BASIC13.56□□□□□ -0.24
LPCAT4Q643R3 NLGN3-206ENST00000612180 3319 ntTSL 5 BASIC13.56□□□□□ -0.24
LPCAT4Q643R3 ENG-201ENST00000344849 3059 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
LPCAT4Q643R3 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
LPCAT4Q643R3 HK2-201ENST00000290573 5772 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
LPCAT4Q643R3 C11orf16-201ENST00000326053 1908 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
LPCAT4Q643R3 ZNF239-205ENST00000535642 1904 ntAPPRIS P1 TSL 2 BASIC13.56□□□□□ -0.24
LPCAT4Q643R3 SLC9A3P3-201ENST00000457608 2229 ntBASIC13.56□□□□□ -0.24
LPCAT4Q643R3 ZNF536-201ENST00000355537 4945 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
LPCAT4Q643R3 CDC42SE2-202ENST00000395246 3485 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
LPCAT4Q643R3 GRIPAP1-207ENST00000593475 2908 ntTSL 5 BASIC13.56□□□□□ -0.24
LPCAT4Q643R3 PPT2-EGFL8-202ENST00000422437 4181 ntAPPRIS P5 TSL 5 BASIC13.56□□□□□ -0.24
LPCAT4Q643R3 KLHL9-201ENST00000359039 5710 ntAPPRIS P1 BASIC13.56□□□□□ -0.24
LPCAT4Q643R3 GATC-203ENST00000551765 4244 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
LPCAT4Q643R3 SPIN3-245ENST00000640768 1722 ntTSL 5 BASIC13.56□□□□□ -0.24
LPCAT4Q643R3 B4GALT4-201ENST00000359213 2385 ntAPPRIS P1 TSL 2 BASIC13.56□□□□□ -0.24
LPCAT4Q643R3 ALDH7A1-201ENST00000409134 4964 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
LPCAT4Q643R3 NT5DC4-201ENST00000327581 1767 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
LPCAT4Q643R3 HK3-201ENST00000292432 3066 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
LPCAT4Q643R3 ZBTB20-211ENST00000471418 3133 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
LPCAT4Q643R3 MPHOSPH10-201ENST00000244230 2484 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
LPCAT4Q643R3 AC002350.2-201ENST00000623894 1828 ntBASIC13.55□□□□□ -0.24
LPCAT4Q643R3 RPS15A-213ENST00000576436 2190 ntTSL 4 BASIC13.55□□□□□ -0.24
LPCAT4Q643R3 ZNF564-201ENST00000339282 2935 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
LPCAT4Q643R3 BNIP3L-201ENST00000380629 3610 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
LPCAT4Q643R3 GALNT4-201ENST00000529983 5399 ntAPPRIS P1 BASIC13.55□□□□□ -0.24
LPCAT4Q643R3 ZNF71-201ENST00000328070 5428 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
LPCAT4Q643R3 AC000120.1-201ENST00000414227 1589 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
LPCAT4Q643R3 SLC12A8-207ENST00000469902 2989 ntAPPRIS P1 TSL 2 BASIC13.55□□□□□ -0.24
LPCAT4Q643R3 ILF3-201ENST00000250241 3035 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
LPCAT4Q643R3 RC3H2-201ENST00000335387 3081 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
LPCAT4Q643R3 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
LPCAT4Q643R3 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
LPCAT4Q643R3 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
LPCAT4Q643R3 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
LPCAT4Q643R3 CRYAA-203ENST00000398133 600 ntTSL 3 BASIC13.55□□□□□ -0.24
LPCAT4Q643R3 AL139094.1-201ENST00000405549 1188 ntBASIC13.55□□□□□ -0.24
LPCAT4Q643R3 RPL37AP1-201ENST00000412502 279 ntBASIC13.55□□□□□ -0.24
LPCAT4Q643R3 KRT18P32-201ENST00000424695 1287 ntBASIC13.55□□□□□ -0.24
LPCAT4Q643R3 LINC01067-201ENST00000432575 664 ntTSL 3 BASIC13.55□□□□□ -0.24
LPCAT4Q643R3 AC005237.2-201ENST00000434368 219 ntBASIC13.55□□□□□ -0.24
LPCAT4Q643R3 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
LPCAT4Q643R3 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC13.55□□□□□ -0.24
LPCAT4Q643R3 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
LPCAT4Q643R3 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC13.55□□□□□ -0.24
LPCAT4Q643R3 FP236240.1-202ENST00000624019 601 ntTSL 3 BASIC13.55□□□□□ -0.24
LPCAT4Q643R3 PRSS30P-206ENST00000641773 873 ntBASIC13.55□□□□□ -0.24
LPCAT4Q643R3 EPM2A-207ENST00000611340 2786 ntTSL 2 BASIC13.55□□□□□ -0.24
LPCAT4Q643R3 RTN4IP1-201ENST00000369063 1682 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
LPCAT4Q643R3 CSNK1G1-205ENST00000607537 2083 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
LPCAT4Q643R3 DRD2-210ENST00000544518 2473 ntAPPRIS ALT1 TSL 1 (best) BASIC13.55□□□□□ -0.24
LPCAT4Q643R3 PPFIA4-202ENST00000295706 6395 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
LPCAT4Q643R3 LINC01993-201ENST00000374945 2934 ntTSL 2 BASIC13.55□□□□□ -0.24
LPCAT4Q643R3 TEAD4-203ENST00000397122 1396 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
LPCAT4Q643R3 GOLGA6L17P-202ENST00000614358 1398 ntBASIC13.55□□□□□ -0.24
LPCAT4Q643R3 ZNF772-202ENST00000356584 1799 ntAPPRIS ALT2 TSL 2 BASIC13.55□□□□□ -0.24
LPCAT4Q643R3 KLF7-204ENST00000423015 1788 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
LPCAT4Q643R3 AC124319.4-201ENST00000622931 2161 ntBASIC13.55□□□□□ -0.24
LPCAT4Q643R3 NRXN1-222ENST00000625672 8113 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
LPCAT4Q643R3 NFATC1-203ENST00000329101 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
LPCAT4Q643R3 SH2D3C-202ENST00000373276 3051 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
LPCAT4Q643R3 HNF4A-204ENST00000415691 2302 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
LPCAT4Q643R3 ZNF473-203ENST00000445728 2833 ntAPPRIS ALT2 TSL 2 BASIC13.54□□□□□ -0.24
LPCAT4Q643R3 ZNF180-201ENST00000221327 4335 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
LPCAT4Q643R3 TBC1D13-202ENST00000372648 3906 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
LPCAT4Q643R3 GRM4-203ENST00000455714 2574 ntTSL 2 BASIC13.54□□□□□ -0.24
LPCAT4Q643R3 AC009336.2-201ENST00000468418 3521 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
LPCAT4Q643R3 FLNC-201ENST00000325888 9188 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
LPCAT4Q643R3 GRM1-204ENST00000492807 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
LPCAT4Q643R3 SPINT1-201ENST00000344051 3056 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
LPCAT4Q643R3 HERC3-203ENST00000407637 2634 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
LPCAT4Q643R3 ZNF571-AS1-203ENST00000586139 2684 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
LPCAT4Q643R3 ARMC8-220ENST00000489213 1714 ntTSL 5 BASIC13.54□□□□□ -0.24
LPCAT4Q643R3 YWHAE-201ENST00000264335 2211 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
LPCAT4Q643R3 AOC4P-203ENST00000566825 2289 ntBASIC13.54□□□□□ -0.24
LPCAT4Q643R3 TSC22D1-203ENST00000458659 4820 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
LPCAT4Q643R3 NCR3-201ENST00000340027 1042 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
LPCAT4Q643R3 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC13.54□□□□□ -0.24
LPCAT4Q643R3 MCCD1P2-201ENST00000423228 335 ntBASIC13.54□□□□□ -0.24
LPCAT4Q643R3 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC13.54□□□□□ -0.24
LPCAT4Q643R3 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC13.54□□□□□ -0.24
LPCAT4Q643R3 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC13.54□□□□□ -0.24
LPCAT4Q643R3 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC13.54□□□□□ -0.24
LPCAT4Q643R3 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC13.54□□□□□ -0.24
LPCAT4Q643R3 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC13.54□□□□□ -0.24
LPCAT4Q643R3 AC022616.1-201ENST00000518688 554 ntBASIC13.54□□□□□ -0.24
LPCAT4Q643R3 LAMTOR5-AS1-209ENST00000597455 805 ntBASIC13.54□□□□□ -0.24
LPCAT4Q643R3 BX640515.1-201ENST00000617215 977 ntBASIC13.54□□□□□ -0.24
LPCAT4Q643R3 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC13.54□□□□□ -0.24
LPCAT4Q643R3 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC13.54□□□□□ -0.24
LPCAT4Q643R3 SLC46A1-208ENST00000618626 5363 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 36.5 ms