Protein–RNA interactions for Protein: P62987

UBA52, Ubiquitin-60S ribosomal protein L40, humanhuman

Known RBP Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBA52P62987 TYK2-205ENST00000525621 4347 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
UBA52P62987 AC025594.2-201ENST00000609480 3902 ntAPPRIS P1 TSL 3 BASIC12.53□□□□□ -0.4
UBA52P62987 ADAT1-201ENST00000307921 1869 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
UBA52P62987 LMBRD2-201ENST00000296603 8185 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
UBA52P62987 LHX6-210ENST00000559895 3587 ntTSL 2 BASIC12.53□□□□□ -0.4
UBA52P62987 LINC00593-202ENST00000560853 1483 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
UBA52P62987 IL9R-201ENST00000244174 1944 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.4
UBA52P62987 PIMREG-205ENST00000572447 1948 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.4
UBA52P62987 TOE1-201ENST00000372090 2389 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
UBA52P62987 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
UBA52P62987 SCARB2-227ENST00000640957 3255 ntAPPRIS ALT1 TSL 5 BASIC12.52□□□□□ -0.4
UBA52P62987 TBXAS1-208ENST00000448866 1963 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
UBA52P62987 FAM189A2-201ENST00000257515 2423 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
UBA52P62987 ANO10-202ENST00000350459 2039 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
UBA52P62987 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
UBA52P62987 MAGED4B-211ENST00000497164 2482 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.4
UBA52P62987 AC084364.1-201ENST00000551967 1556 ntBASIC12.52□□□□□ -0.4
UBA52P62987 OR52A1-202ENST00000380367 9783 ntAPPRIS P1 BASIC12.52□□□□□ -0.4
UBA52P62987 IL1RAPL2-202ENST00000372582 2985 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
UBA52P62987 PHF3-209ENST00000509330 2969 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
UBA52P62987 ADAM33-201ENST00000350009 3480 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.4
UBA52P62987 HSD17B4-215ENST00000510025 2589 ntTSL 2 BASIC12.52□□□□□ -0.4
UBA52P62987 PCDHA2-202ENST00000520672 3056 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
UBA52P62987 FAM155B-201ENST00000252338 4013 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
UBA52P62987 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.4
UBA52P62987 MED14-201ENST00000324817 7984 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
UBA52P62987 MCF2L-204ENST00000375608 3648 ntTSL 5 BASIC12.52□□□□□ -0.4
UBA52P62987 CELF1-214ENST00000531165 3650 ntTSL 2 BASIC12.52□□□□□ -0.41
UBA52P62987 TTC14-202ENST00000382584 2274 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
UBA52P62987 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC12.52□□□□□ -0.41
UBA52P62987 AGRP-201ENST00000290953 764 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
UBA52P62987 CES3-201ENST00000303334 3834 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
UBA52P62987 BRF1-202ENST00000379932 884 ntTSL 5 BASIC12.52□□□□□ -0.41
UBA52P62987 MIR1247-201ENST00000408206 136 ntBASIC12.52□□□□□ -0.41
UBA52P62987 AL583835.2-202ENST00000421363 1104 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
UBA52P62987 AL929472.3-201ENST00000433474 700 ntTSL 5 BASIC12.52□□□□□ -0.41
UBA52P62987 AC078785.1-203ENST00000467342 573 ntTSL 4 BASIC12.52□□□□□ -0.41
UBA52P62987 KRT18P43-201ENST00000469825 1281 ntBASIC12.52□□□□□ -0.41
UBA52P62987 AP001007.1-201ENST00000526796 645 ntTSL 2 BASIC12.52□□□□□ -0.41
UBA52P62987 RPL8-205ENST00000527914 551 ntTSL 3 BASIC12.52□□□□□ -0.41
UBA52P62987 AL583722.2-201ENST00000557223 663 ntTSL 3 BASIC12.52□□□□□ -0.41
UBA52P62987 IGHV3OR16-16-201ENST00000563644 343 ntBASIC12.52□□□□□ -0.41
UBA52P62987 LINC02109-201ENST00000565798 869 ntTSL 5 BASIC12.52□□□□□ -0.41
UBA52P62987 MIF4GD-206ENST00000579119 856 ntTSL 3 BASIC12.52□□□□□ -0.41
UBA52P62987 MIR3615-201ENST00000581999 87 ntBASIC12.52□□□□□ -0.41
UBA52P62987 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC12.52□□□□□ -0.41
UBA52P62987 AL450472.2-201ENST00000603663 1156 ntBASIC12.52□□□□□ -0.41
UBA52P62987 AC015819.2-201ENST00000618730 555 ntTSL 3 BASIC12.52□□□□□ -0.41
UBA52P62987 AC008687.7-202ENST00000637404 953 ntBASIC12.52□□□□□ -0.41
UBA52P62987 CPNE5-201ENST00000244751 3897 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
UBA52P62987 AC011298.1-201ENST00000407635 3398 ntTSL 2 BASIC12.52□□□□□ -0.41
UBA52P62987 USP51-201ENST00000500968 4407 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
UBA52P62987 SUOX-208ENST00000548274 2352 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
UBA52P62987 PLA2G4F-202ENST00000397272 5587 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
UBA52P62987 BPIFB2-201ENST00000170150 1898 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
UBA52P62987 SGCE-202ENST00000415788 1871 ntTSL 2 BASIC12.52□□□□□ -0.41
UBA52P62987 PLD2-201ENST00000263088 3503 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
UBA52P62987 SON-203ENST00000381679 7860 ntTSL 5 BASIC12.52□□□□□ -0.41
UBA52P62987 TRIM11-204ENST00000493030 5774 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
UBA52P62987 ALDOA-225ENST00000569545 1359 ntAPPRIS P2 TSL 5 BASIC12.52□□□□□ -0.41
UBA52P62987 TBC1D8-AS1-201ENST00000610202 2478 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
UBA52P62987 AL139193.2-201ENST00000553712 1954 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
UBA52P62987 RBM44-201ENST00000316997 4282 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
UBA52P62987 TFEB-205ENST00000394283 2595 ntTSL 2 BASIC12.52□□□□□ -0.41
UBA52P62987 SLC1A1-201ENST00000262352 3722 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
UBA52P62987 TRMT10B-202ENST00000377753 2027 ntTSL 2 BASIC12.52□□□□□ -0.41
UBA52P62987 DSCAML1-203ENST00000527706 6099 ntTSL 5 BASIC12.52□□□□□ -0.41
UBA52P62987 GUSBP11-206ENST00000455485 3816 ntTSL 2 BASIC12.52□□□□□ -0.41
UBA52P62987 MYO16-203ENST00000357550 6779 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
UBA52P62987 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
UBA52P62987 LAMB2-201ENST00000305544 5643 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
UBA52P62987 COX6B2-210ENST00000593184 2083 ntAPPRIS P1 TSL 2 BASIC12.52□□□□□ -0.41
UBA52P62987 TBX10-201ENST00000335385 1548 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
UBA52P62987 NHSL1-202ENST00000343505 6535 ntAPPRIS P3 TSL 5 BASIC12.52□□□□□ -0.41
UBA52P62987 NFKB1-201ENST00000226574 4085 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
UBA52P62987 SLC46A1-208ENST00000618626 5363 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
UBA52P62987 PPP2R5E-201ENST00000337537 6659 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
UBA52P62987 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
UBA52P62987 MFSD2B-201ENST00000338315 2850 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
UBA52P62987 MAP3K12-203ENST00000547035 2944 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
UBA52P62987 KANK2-205ENST00000589359 3048 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
UBA52P62987 BTBD9-206ENST00000481247 8525 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
UBA52P62987 TCF3-201ENST00000262965 4451 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
UBA52P62987 L3MBTL1-206ENST00000427442 3157 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
UBA52P62987 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC12.51□□□□□ -0.41
UBA52P62987 ZNF501-205ENST00000620116 3382 ntAPPRIS P1 TSL 4 BASIC12.51□□□□□ -0.41
UBA52P62987 ARID3B-206ENST00000622429 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
UBA52P62987 UQCRFS1-201ENST00000304863 3475 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
UBA52P62987 ZFHX2-205ENST00000615307 1972 ntTSL 2 BASIC12.51□□□□□ -0.41
UBA52P62987 FNTB-201ENST00000246166 2834 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
UBA52P62987 ZNF239-203ENST00000426961 2027 ntAPPRIS P1 TSL 2 BASIC12.51□□□□□ -0.41
UBA52P62987 ZNRF3-202ENST00000406323 2878 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
UBA52P62987 CACNA1G-203ENST00000358244 7030 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
UBA52P62987 ROPN1-206ENST00000479867 2056 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
UBA52P62987 NPPC-201ENST00000295440 500 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
UBA52P62987 KRTAP19-7-201ENST00000334849 440 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
UBA52P62987 MASP2-202ENST00000400898 726 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
UBA52P62987 GPAA1P2-201ENST00000417923 928 ntBASIC12.51□□□□□ -0.41
UBA52P62987 AC136604.1-201ENST00000418535 575 ntBASIC12.51□□□□□ -0.41
UBA52P62987 RFPL4A-201ENST00000434937 1035 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Retrieved 100 of 98,524 protein–RNA pairs in 55.3 ms