Protein–RNA interactions for Protein: P60709

ACTB, Actin, cytoplasmic 1, humanhuman

Predictions only

Length 375 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACTBP60709 AL391069.4-201ENST00000609583 481 ntBASIC12.43□□□□□ -0.42
ACTBP60709 AC116165.1-201ENST00000611806 668 ntBASIC12.43□□□□□ -0.42
ACTBP60709 MYLK-202ENST00000354792 7531 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
ACTBP60709 OSBP2-219ENST00000535268 3248 ntTSL 2 BASIC12.43□□□□□ -0.42
ACTBP60709 SLC29A4-201ENST00000297195 2839 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
ACTBP60709 Z99774.1-201ENST00000382641 2613 ntTSL 2 BASIC12.43□□□□□ -0.42
ACTBP60709 KY-202ENST00000503669 2003 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
ACTBP60709 AL358334.2-201ENST00000553648 4714 ntTSL 2 BASIC12.43□□□□□ -0.42
ACTBP60709 PGAP2-203ENST00000396986 1837 ntTSL 2 BASIC12.43□□□□□ -0.42
ACTBP60709 LIMD1-202ENST00000440097 2773 ntTSL 5 BASIC12.43□□□□□ -0.42
ACTBP60709 SCN8A-202ENST00000355133 5820 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
ACTBP60709 BORCS8-202ENST00000462790 1429 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
ACTBP60709 ESRRB-207ENST00000556177 1427 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
ACTBP60709 BCL2L12-211ENST00000614495 1402 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
ACTBP60709 SLFNL1-AS1-201ENST00000626479 4800 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
ACTBP60709 PIAS1-202ENST00000545237 2932 ntTSL 2 BASIC12.43□□□□□ -0.42
ACTBP60709 FLNA-203ENST00000369850 8382 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
ACTBP60709 AC013472.1-203ENST00000380387 1966 ntTSL 4 BASIC12.43□□□□□ -0.42
ACTBP60709 AL445209.1-201ENST00000607269 3491 ntBASIC12.43□□□□□ -0.42
ACTBP60709 CACNA1G-208ENST00000442258 7226 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
ACTBP60709 EGFR-207ENST00000455089 3844 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
ACTBP60709 TECPR1-204ENST00000447648 6564 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
ACTBP60709 PGAM1P5-202ENST00000552554 2148 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
ACTBP60709 NFKBIZ-202ENST00000326172 3923 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
ACTBP60709 INTS11-248ENST00000545578 2263 ntTSL 2 BASIC12.42□□□□□ -0.42
ACTBP60709 CES1P1-201ENST00000421606 1704 ntBASIC12.42□□□□□ -0.42
ACTBP60709 TMEM100-201ENST00000424486 1747 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
ACTBP60709 COL6A3-203ENST00000353578 9963 ntTSL 5 BASIC12.42□□□□□ -0.42
ACTBP60709 HSD17B6-201ENST00000322165 1512 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
ACTBP60709 LTA-214ENST00000454783 1507 ntAPPRIS P1 TSL 2 BASIC12.42□□□□□ -0.42
ACTBP60709 LRSAM1-201ENST00000300417 3146 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
ACTBP60709 DDX54-202ENST00000314045 4380 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
ACTBP60709 SGCE-202ENST00000415788 1871 ntTSL 2 BASIC12.42□□□□□ -0.42
ACTBP60709 MTMR4-204ENST00000579925 5622 ntTSL 5 BASIC12.42□□□□□ -0.42
ACTBP60709 FKBPL-201ENST00000375156 1345 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
ACTBP60709 RPS28-203ENST00000600659 1326 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
ACTBP60709 KLK8-211ENST00000600767 1324 ntAPPRIS P1 TSL 2 BASIC12.42□□□□□ -0.42
ACTBP60709 CYP26B1-205ENST00000546307 4331 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
ACTBP60709 ACVR1B-202ENST00000415850 1665 ntTSL 2 BASIC12.42□□□□□ -0.42
ACTBP60709 UBA6-202ENST00000420827 1664 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
ACTBP60709 SLC8B1-202ENST00000546737 1656 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
ACTBP60709 RAB37-216ENST00000613645 1653 ntAPPRIS ALT1 TSL 1 (best) BASIC12.42□□□□□ -0.42
ACTBP60709 CENPL-202ENST00000356198 2357 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
ACTBP60709 IFT57-201ENST00000264538 3203 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
ACTBP60709 MEST-206ENST00000416162 2158 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
ACTBP60709 TRIM23-202ENST00000274327 1829 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
ACTBP60709 CEP126-201ENST00000263468 7039 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
ACTBP60709 ALAD-201ENST00000409155 3173 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
ACTBP60709 HHEX-202ENST00000472590 1605 ntTSL 2 BASIC12.42□□□□□ -0.42
ACTBP60709 STK3-218ENST00000617590 2485 ntTSL 5 BASIC12.42□□□□□ -0.42
ACTBP60709 H2BFWT-201ENST00000217926 894 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
ACTBP60709 ENDOV-201ENST00000323854 1226 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
ACTBP60709 MUC1-201ENST00000337604 859 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
ACTBP60709 RPL36-201ENST00000347512 707 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
ACTBP60709 PIR-201ENST00000380420 1282 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
ACTBP60709 LEPROTL1-202ENST00000442880 908 ntTSL 2 BASIC12.42□□□□□ -0.42
ACTBP60709 GNAQP1-201ENST00000444815 1067 ntBASIC12.42□□□□□ -0.42
ACTBP60709 TSPY16P-201ENST00000449843 468 ntBASIC12.42□□□□□ -0.42
ACTBP60709 RHOA-206ENST00000454011 889 ntTSL 2 BASIC12.42□□□□□ -0.42
ACTBP60709 AC004522.2-201ENST00000456499 680 ntTSL 3 BASIC12.42□□□□□ -0.42
ACTBP60709 AC147067.1-201ENST00000466692 579 ntTSL 2 BASIC12.42□□□□□ -0.42
ACTBP60709 RPL13AP25-201ENST00000484130 612 ntBASIC12.42□□□□□ -0.42
ACTBP60709 TMEM161B-AS1-202ENST00000501715 1101 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
ACTBP60709 AC093004.1-201ENST00000508850 424 ntBASIC12.42□□□□□ -0.42
ACTBP60709 SERF1B-208ENST00000515588 792 ntTSL 2 BASIC12.42□□□□□ -0.42
ACTBP60709 AC009902.2-201ENST00000518880 620 ntTSL 4 BASIC12.42□□□□□ -0.42
ACTBP60709 FXYD6-202ENST00000524656 1033 ntAPPRIS P2 TSL 3 BASIC12.42□□□□□ -0.42
ACTBP60709 AC233702.7-201ENST00000536958 924 ntTSL 5 BASIC12.42□□□□□ -0.42
ACTBP60709 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC12.42□□□□□ -0.42
ACTBP60709 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC12.42□□□□□ -0.42
ACTBP60709 DUSP13-214ENST00000607131 1019 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
ACTBP60709 AC004790.1-201ENST00000612686 536 ntBASIC12.42□□□□□ -0.42
ACTBP60709 HAL-202ENST00000538703 2637 ntTSL 2 BASIC12.42□□□□□ -0.42
ACTBP60709 OR6F1-204ENST00000641470 1762 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
ACTBP60709 PAAF1-201ENST00000310571 4994 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
ACTBP60709 NCS1-201ENST00000372398 4991 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
ACTBP60709 BORCS8-MEF2B-203ENST00000514819 1406 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
ACTBP60709 AC093899.2-201ENST00000513963 1935 ntAPPRIS P1 TSL 2 BASIC12.42□□□□□ -0.42
ACTBP60709 NIN-206ENST00000453196 6785 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
ACTBP60709 CLIC5-208ENST00000544153 2051 ntTSL 2 BASIC12.42□□□□□ -0.42
ACTBP60709 MED15-204ENST00000406969 3210 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
ACTBP60709 PDE2A-203ENST00000418754 2855 ntTSL 2 BASIC12.42□□□□□ -0.42
ACTBP60709 B3GAT1-202ENST00000392580 3522 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
ACTBP60709 KCNMA1-291ENST00000640834 3664 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
ACTBP60709 TP53INP1-202ENST00000448464 5631 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
ACTBP60709 MYRF-202ENST00000278836 5927 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
ACTBP60709 CRISPLD2-209ENST00000567845 2178 ntAPPRIS ALT1 TSL 5 BASIC12.42□□□□□ -0.42
ACTBP60709 IL1RAPL2-202ENST00000372582 2985 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
ACTBP60709 BRSK1-206ENST00000590333 2977 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
ACTBP60709 MICB-202ENST00000399150 2346 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
ACTBP60709 OS9-206ENST00000435406 2346 ntTSL 2 BASIC12.42□□□□□ -0.42
ACTBP60709 EOGT-202ENST00000383701 4731 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
ACTBP60709 BEGAIN-212ENST00000637716 3259 ntAPPRIS P5 TSL 5 BASIC12.42□□□□□ -0.42
ACTBP60709 RNF41-202ENST00000394013 2452 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
ACTBP60709 POLM-201ENST00000242248 2631 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
ACTBP60709 C1QTNF9-201ENST00000332018 1830 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
ACTBP60709 MED6-201ENST00000256379 1995 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
ACTBP60709 DUOX2-201ENST00000389039 6533 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
ACTBP60709 ENO2-201ENST00000229277 2423 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
ACTBP60709 CLCN4-201ENST00000380829 2418 ntTSL 5 BASIC12.41□□□□□ -0.42
Retrieved 100 of 98,524 protein–RNA pairs in 37.7 ms